RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TMEM47Q9BQJ4 181 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 PAGR1Q9BTK6 254 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 ZSWIM5Q9P217 1185 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 PTPN22Q9Y2R2 807 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 TNPO2O14787 897 aaKnown RBP13.9□□□□□ -0.18
HSPG2-206ENST00000439717 SLC27A2O14975 620 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 CNMDO75829 334 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 CTGFP29279 349 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 SLC1A4P43007 532 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 CCNA1P78396 465 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 CREB3L3Q68CJ9 461 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 RCSD1Q6JBY9 416 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 DCAF4Q8WV16 495 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 NUP88Q99567 741 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-206ENST00000439717 SLF1Q9BQI6 1058 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 UBAC1Q9BSL1 405 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 SRRDQ9UH36 339 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 FEM1BQ9UK73 627 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 PPP1R9AQ9ULJ8 1098 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 ADAMTS5Q9UNA0 930 aa13.9□□□□□ -0.18
HSPG2-206ENST00000439717 EPB41L2O43491 1005 aaKnown RBP13.89□□□□□ -0.19
HSPG2-206ENST00000439717 PLA2G6O60733 806 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 REC8O95072 547 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 MAPK4P31152 587 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 Q3C1V9 767 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 STOX1Q6ZVD7 989 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 FAM160B2Q86V87 743 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 PRPF38AQ8NAV1 312 aaKnown RBP13.89□□□□□ -0.19
HSPG2-206ENST00000439717 COA7Q96BR5 231 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 ATG4CQ96DT6 458 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 ZKSCAN3Q9BRR0 538 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 FBXO28Q9NVF7 368 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 BTBD7Q9P203 1132 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 TNKSO95271 1327 aa13.89□□□□□ -0.19
HSPG2-206ENST00000439717 RLFQ13129 1914 aa13.88□□□□□ -0.19
HSPG2-206ENST00000439717 VWA5AO00534 786 aa13.88□□□□□ -0.19
HSPG2-206ENST00000439717 FDX1P10109 184 aa13.88□□□□□ -0.19
HSPG2-206ENST00000439717 MCCP23508 829 aa13.88□□□□□ -0.19
HSPG2-206ENST00000439717 STAT2P52630 851 aa13.88□□□□□ -0.19
HSPG2-206ENST00000439717 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
HSPG2-206ENST00000439717 CCAR1Q8IX12 1150 aaKnown RBP13.88□□□□□ -0.19
HSPG2-206ENST00000439717 ENAHQ8N8S7 591 aaPredicted RBP13.88□□□□□ -0.19
HSPG2-206ENST00000439717 CHURC1Q8WUH1 139 aa13.88□□□□□ -0.19
HSPG2-206ENST00000439717 ABHD8Q96I13 439 aa13.88□□□□□ -0.19
HSPG2-206ENST00000439717 KAT14Q9H8E8 782 aa13.88□□□□□ -0.19
HSPG2-206ENST00000439717 TAF6LQ9Y6J9 622 aa13.88□□□□□ -0.19
HSPG2-206ENST00000439717 A0A0G2JMZ2 1700 aa13.87□□□□□ -0.19
HSPG2-206ENST00000439717 ERICH2A1L162 156 aa13.87□□□□□ -0.19
HSPG2-206ENST00000439717 TMEM232C9JQI7 657 aa13.87□□□□□ -0.19
HSPG2-206ENST00000439717 PEX10O60683 326 aa13.87□□□□□ -0.19
HSPG2-206ENST00000439717 ECM2O94769 699 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-206ENST00000439717 SART3Q15020 963 aaKnown RBP13.87□□□□□ -0.19
HSPG2-206ENST00000439717 TSGA10IPQ3SY00 556 aa13.87□□□□□ -0.19
HSPG2-206ENST00000439717 IFIT1BQ5T764 474 aaKnown RBP13.87□□□□□ -0.19
HSPG2-206ENST00000439717 MB21D2Q8IYB1 491 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-206ENST00000439717 SHCBP1Q8NEM2 672 aa13.87□□□□□ -0.19
HSPG2-206ENST00000439717 MTA3Q9BTC8 594 aa13.87□□□□□ -0.19
HSPG2-206ENST00000439717 SPATC1LQ9H0A9 340 aa13.87□□□□□ -0.19
HSPG2-206ENST00000439717 HPS5Q9UPZ3 1129 aa13.87□□□□□ -0.19
HSPG2-206ENST00000439717 MGAMO43451 1857 aa13.87□□□□□ -0.19
HSPG2-206ENST00000439717 ZSWIM8A7E2V4 1837 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 PARP14Q460N5 1801 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 EIF5BO60841 1220 aaKnown RBP13.86□□□□□ -0.19
HSPG2-206ENST00000439717 ZBED4O75132 1171 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 SLC25A27O95847 323 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 SNHG28P0DPA3 235 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 PDHBP11177 359 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 ZKSCAN1P17029 563 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-206ENST00000439717 COPB2P35606 906 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 PRKCZQ05513 592 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 IRF5Q13568 498 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 KRT32Q14532 448 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 TMEM132BQ14DG7 1078 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 SEC23AQ15436 765 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 CCDC96Q2M329 555 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-206ENST00000439717 KCTD1Q719H9 257 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 GPR142Q7Z601 462 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 PLEKHH3Q7Z736 793 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 PNMA1Q8ND90 353 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 REPS2Q8NFH8 660 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 SOCS4Q8WXH5 440 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 KIFC2Q96AC6 838 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 MOV10L1Q9BXT6 1211 aaKnown RBP13.86□□□□□ -0.19
HSPG2-206ENST00000439717 PORCNQ9H237 461 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 CWC22Q9HCG8 908 aaKnown RBP13.86□□□□□ -0.19
HSPG2-206ENST00000439717 ISY1Q9ULR0 285 aaKnown RBP13.86□□□□□ -0.19
HSPG2-206ENST00000439717 PTCH2Q9Y6C5 1203 aa13.86□□□□□ -0.19
HSPG2-206ENST00000439717 IFIT3O14879 490 aaKnown RBP13.85□□□□□ -0.19
HSPG2-206ENST00000439717 ATP2A1O14983 1001 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 MCM5P33992 734 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 FLT3LGP49771 235 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 OAZ1P54368 228 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 IKQ13123 557 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-206ENST00000439717 PLS1Q14651 629 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 GPATCH4Q5T3I0 446 aaKnown RBP13.85□□□□□ -0.19
HSPG2-206ENST00000439717 BTNL9Q6UXG8 535 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 RIOX2Q8IUF8 465 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 RAET1EQ8TD07 263 aa13.85□□□□□ -0.19
HSPG2-206ENST00000439717 KCNB2Q92953 911 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms