RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PPP1R9AQ9ULJ8 1098 aa29.27■■■□□ 2.28
RAPGEF1-206ENST00000438647 STX8Q9UNK0 236 aa29.27■■■□□ 2.28
RAPGEF1-206ENST00000438647 RLFQ13129 1914 aa29.26■■■□□ 2.27
RAPGEF1-206ENST00000438647 MYH4Q9Y623 1939 aa29.26■■■□□ 2.27
RAPGEF1-206ENST00000438647 ZNF213O14771 459 aa29.26■■■□□ 2.27
RAPGEF1-206ENST00000438647 INHAP05111 366 aa29.26■■■□□ 2.27
RAPGEF1-206ENST00000438647 XRCC5P13010 732 aaKnown RBP29.26■■■□□ 2.27
RAPGEF1-206ENST00000438647 RGS2P41220 211 aa29.26■■■□□ 2.27
RAPGEF1-206ENST00000438647 MTFR1Q15390 333 aa29.26■■■□□ 2.27
RAPGEF1-206ENST00000438647 MFSD6Q6ZSS7 791 aa29.26■■■□□ 2.27
RAPGEF1-206ENST00000438647 LRRC47Q8N1G4 583 aaKnown RBP29.26■■■□□ 2.27
RAPGEF1-206ENST00000438647 A0A0G2JMZ2 1700 aa29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 HMGCRP04035 888 aa29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 CYP2B6P20813 491 aa29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 NT5C2P49902 561 aa29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 RRP12Q5JTH9 1297 aaKnown RBP29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 MORN1Q5T089 497 aa29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 AKNAD1Q5T1N1 836 aa29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 TRMT44Q8IYL2 757 aaKnown RBP29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 SHCBP1Q8NEM2 672 aa29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 STAG1Q8WVM7 1258 aa29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 MOV10L1Q9BXT6 1211 aaKnown RBP29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 FBXO28Q9NVF7 368 aa29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 CTNNA3Q9UI47 895 aa29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 ADAMTS5Q9UNA0 930 aa29.25■■■□□ 2.27
RAPGEF1-206ENST00000438647 CCL5P13501 91 aa29.24■■■□□ 2.27
RAPGEF1-206ENST00000438647 PLS1Q14651 629 aa29.24■■■□□ 2.27
RAPGEF1-206ENST00000438647 NKX2-3Q8TAU0 364 aa29.24■■■□□ 2.27
RAPGEF1-206ENST00000438647 NUP88Q99567 741 aaPredicted RBP29.24■■■□□ 2.27
RAPGEF1-206ENST00000438647 SLF1Q9BQI6 1058 aa29.24■■■□□ 2.27
RAPGEF1-206ENST00000438647 RNF208Q9H0X6 261 aa29.24■■■□□ 2.27
RAPGEF1-206ENST00000438647 TACC3Q9Y6A5 838 aa29.24■■■□□ 2.27
RAPGEF1-206ENST00000438647 SLC15A5A6NIM6 579 aa29.23■■■□□ 2.27
RAPGEF1-206ENST00000438647 SLFN13Q68D06 897 aa29.23■■■□□ 2.27
RAPGEF1-206ENST00000438647 USP6NLQ92738 828 aa29.23■■■□□ 2.27
RAPGEF1-206ENST00000438647 IL17RBQ9NRM6 502 aa29.23■■■□□ 2.27
RAPGEF1-206ENST00000438647 EN2P19622 333 aaPredicted RBP29.22■■■□□ 2.27
RAPGEF1-206ENST00000438647 PTPREP23469 700 aa29.22■■■□□ 2.27
RAPGEF1-206ENST00000438647 CHMLP26374 656 aa29.22■■■□□ 2.27
RAPGEF1-206ENST00000438647 MAP2K5Q13163 448 aa29.22■■■□□ 2.27
RAPGEF1-206ENST00000438647 IMMTQ16891 758 aaKnown RBP29.22■■■□□ 2.27
RAPGEF1-206ENST00000438647 PRPF38AQ8NAV1 312 aaKnown RBP29.22■■■□□ 2.27
RAPGEF1-206ENST00000438647 APBA2Q99767 749 aa29.22■■■□□ 2.27
RAPGEF1-206ENST00000438647 MROH8Q9H579 483 aa29.22■■■□□ 2.27
RAPGEF1-206ENST00000438647 PARP14Q460N5 1801 aa29.22■■■□□ 2.27
RAPGEF1-206ENST00000438647 VWA5AO00534 786 aa29.21■■■□□ 2.27
RAPGEF1-206ENST00000438647 STRNO43815 780 aa29.21■■■□□ 2.27
RAPGEF1-206ENST00000438647 SLC25A27O95847 323 aa29.21■■■□□ 2.27
RAPGEF1-206ENST00000438647 NEFLP07196 543 aa29.21■■■□□ 2.27
RAPGEF1-206ENST00000438647 GJB1P08034 283 aa29.21■■■□□ 2.27
RAPGEF1-206ENST00000438647 ERCC3P19447 782 aa29.21■■■□□ 2.27
RAPGEF1-206ENST00000438647 GRB14Q14449 540 aa29.21■■■□□ 2.27
RAPGEF1-206ENST00000438647 TCP11L1Q9NUJ3 509 aa29.21■■■□□ 2.27
RAPGEF1-206ENST00000438647 FEM1BQ9UK73 627 aa29.21■■■□□ 2.27
RAPGEF1-206ENST00000438647 PLXNB2O15031 1838 aa29.21■■■□□ 2.27
RAPGEF1-206ENST00000438647 NMT2O60551 498 aa29.2■■■□□ 2.26
RAPGEF1-206ENST00000438647 BMP3P12645 472 aa29.2■■■□□ 2.26
RAPGEF1-206ENST00000438647 ZKSCAN1P17029 563 aaPredicted RBP29.2■■■□□ 2.26
RAPGEF1-206ENST00000438647 TMEM132BQ14DG7 1078 aa29.2■■■□□ 2.26
RAPGEF1-206ENST00000438647 TBC1D10CQ8IV04 446 aa29.2■■■□□ 2.26
RAPGEF1-206ENST00000438647 ESR2Q92731 530 aa29.2■■■□□ 2.26
RAPGEF1-206ENST00000438647 GMCL1Q96IK5 515 aa29.2■■■□□ 2.26
RAPGEF1-206ENST00000438647 NBPF3Q9H094 633 aa29.2■■■□□ 2.26
RAPGEF1-206ENST00000438647 UNC93B1Q9H1C4 597 aa29.2■■■□□ 2.26
RAPGEF1-206ENST00000438647 COPB2P35606 906 aa29.19■■■□□ 2.26
RAPGEF1-206ENST00000438647 NOVP48745 357 aa29.19■■■□□ 2.26
RAPGEF1-206ENST00000438647 NCAPG2Q86XI2 1143 aa29.19■■■□□ 2.26
RAPGEF1-206ENST00000438647 TRIB2Q92519 343 aa29.19■■■□□ 2.26
RAPGEF1-206ENST00000438647 SLC1A4P43007 532 aa29.18■■■□□ 2.26
RAPGEF1-206ENST00000438647 CCDC136Q96JN2 1154 aa29.18■■■□□ 2.26
RAPGEF1-206ENST00000438647 IL25Q9H293 177 aa29.18■■■□□ 2.26
RAPGEF1-206ENST00000438647 ISY1Q9ULR0 285 aaKnown RBP29.18■■■□□ 2.26
RAPGEF1-206ENST00000438647 CTDP1Q9Y5B0 961 aaPredicted RBP29.18■■■□□ 2.26
RAPGEF1-206ENST00000438647 LAMA4Q16363 1823 aa29.17■■■□□ 2.26
RAPGEF1-206ENST00000438647 HOXC6P09630 235 aa29.17■■■□□ 2.26
RAPGEF1-206ENST00000438647 CAPN2P17655 700 aa29.17■■■□□ 2.26
RAPGEF1-206ENST00000438647 STAT3P40763 770 aa29.17■■■□□ 2.26
RAPGEF1-206ENST00000438647 GJA8P48165 433 aa29.17■■■□□ 2.26
RAPGEF1-206ENST00000438647 RIOX2Q8IUF8 465 aa29.17■■■□□ 2.26
RAPGEF1-206ENST00000438647 ABRAQ8N0Z2 381 aa29.17■■■□□ 2.26
RAPGEF1-206ENST00000438647 ZNF214Q9UL59 606 aaPredicted RBP29.17■■■□□ 2.26
RAPGEF1-206ENST00000438647 ZBED4O75132 1171 aa29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 FDX1P10109 184 aa29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 TOP1P11387 765 aaKnown RBP29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 STAT2P52630 851 aa29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 REPS2Q8NFH8 660 aa29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 CHURC1Q8WUH1 139 aa29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 KIFC2Q96AC6 838 aa29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 TEX13BQ9BXU2 312 aa29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 HMX1Q9NP08 348 aaPredicted RBP29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 PAK6Q9NQU5 681 aaPredicted RBP29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 SLC5A4Q9NY91 659 aa29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 MKI67P46013 3256 aaKnown RBP29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 NEDD4P46934 1319 aa29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 RPTORQ8N122 1335 aa29.16■■■□□ 2.26
RAPGEF1-206ENST00000438647 MCCP23508 829 aa29.15■■■□□ 2.26
RAPGEF1-206ENST00000438647 ADORA2AP29274 412 aa29.15■■■□□ 2.26
RAPGEF1-206ENST00000438647 DPP9Q86TI2 863 aa29.15■■■□□ 2.26
RAPGEF1-206ENST00000438647 FAM160B2Q86V87 743 aa29.15■■■□□ 2.26
RAPGEF1-206ENST00000438647 TTC14Q96N46 770 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms