RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 TXNDC11Q6PKC3 985 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 RAVER1Q8IY67 606 aaKnown RBP8.12□□□□□ -1.11
SPEN-202ENST00000438066 ELMO3Q96BJ8 720 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 CORO1BQ9BR76 489 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 EID1Q9Y6B2 187 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 SNCAIPQ9Y6H5 919 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 CENPJQ9HC77 1338 aaPredicted RBP8.12□□□□□ -1.11
SPEN-202ENST00000438066 PTPRMP28827 1452 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 USP32Q8NFA0 1604 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 C3P01024 1663 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 IQCA1LA6NCM1 817 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 C2CD2LO14523 706 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 ADH7P40394 386 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 SLC7A5Q01650 507 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 TNFRSF25Q93038 417 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 CCDC86Q9H6F5 360 aaKnown RBP8.12□□□□□ -1.11
SPEN-202ENST00000438066 CNNM2Q9H8M5 875 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 PANK3Q9H999 370 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 FAM86C1Q9NVL1 165 aa8.12□□□□□ -1.11
SPEN-202ENST00000438066 LRPPRCP42704 1394 aaKnown RBP8.11□□□□□ -1.11
SPEN-202ENST00000438066 ZMYM3Q14202 1370 aa8.11□□□□□ -1.11
SPEN-202ENST00000438066 PRAMEF27A3QJZ7 478 aa8.11□□□□□ -1.11
SPEN-202ENST00000438066 DCDC2CA8MYV0 355 aa8.11□□□□□ -1.11
SPEN-202ENST00000438066 TPD52L2O43399 206 aaKnown RBP8.11□□□□□ -1.11
SPEN-202ENST00000438066 CYP11A1P05108 521 aa8.11□□□□□ -1.11
SPEN-202ENST00000438066 BMP4P12644 408 aa8.11□□□□□ -1.11
SPEN-202ENST00000438066 POLR2BP30876 1174 aaKnown RBP8.11□□□□□ -1.11
SPEN-202ENST00000438066 HNRNPUQ00839 825 aaKnown RBP eCLIP8.11□□□□□ -1.11
SPEN-202ENST00000438066 EXOC2Q96KP1 924 aa8.11□□□□□ -1.11
SPEN-202ENST00000438066 EPN3Q9H201 632 aa8.11□□□□□ -1.11
SPEN-202ENST00000438066 NCOA5Q9HCD5 579 aaKnown RBP8.11□□□□□ -1.11
SPEN-202ENST00000438066 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
SPEN-202ENST00000438066 NPC1L1Q9UHC9 1359 aa8.11□□□□□ -1.11
SPEN-202ENST00000438066 KNDC1Q76NI1 1749 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 RIMS2Q9UQ26 1411 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 LOC102724159A0A0B4J2E5 919 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 TNFRSF10CO14798 259 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 PDE4BQ07343 736 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 PWP2Q15269 919 aaKnown RBP8.1□□□□□ -1.11
SPEN-202ENST00000438066 SV2CQ496J9 727 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 PKDCCQ504Y2 493 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 ZC3H12BQ5HYM0 836 aaKnown RBP8.1□□□□□ -1.11
SPEN-202ENST00000438066 AXDND1Q5T1B0 1012 aaPredicted RBP8.1□□□□□ -1.11
SPEN-202ENST00000438066 CDCP2Q5VXM1 449 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 PSAPL1Q6NUJ1 521 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 CDC6Q99741 560 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 TCEAL9Q9UHQ7 104 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 CSADQ9Y600 493 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 DLC1Q96QB1 1528 aa8.1□□□□□ -1.11
SPEN-202ENST00000438066 ZBED9Q6R2W3 1325 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 CDC14CA4D256 554 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 CHURC1-FNTBB4DL54 471 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 MAOBP27338 520 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 SOX5P35711 763 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 TBX4P57082 545 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 MMRN1Q13201 1228 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 PDE3AQ14432 1141 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 POU4F3Q15319 338 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 FAM209AQ5JX71 171 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 YOD1Q5VVQ6 348 aaPredicted RBP8.09□□□□□ -1.11
SPEN-202ENST00000438066 TMEM132EQ6IEE7 984 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 FOXR1Q6PIV2 292 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 RNF180Q86T96 592 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 CCDC146Q8IYE0 955 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 PNISRQ8TF01 805 aaKnown RBP8.09□□□□□ -1.11
SPEN-202ENST00000438066 WDR89Q96FK6 387 aaPredicted RBP8.09□□□□□ -1.11
SPEN-202ENST00000438066 SOX17Q9H6I2 414 aaPredicted RBP8.09□□□□□ -1.11
SPEN-202ENST00000438066 MCM8Q9UJA3 840 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 YTHDC2Q9H6S0 1430 aaKnown RBP8.09□□□□□ -1.11
SPEN-202ENST00000438066 TNRQ92752 1358 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 CCDC163A0A0D9SF12 145 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 AGRPO00253 132 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 PGRP06401 933 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 RAG1P15918 1043 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 C12orf40Q86WS4 652 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 FAM9BQ8IZU0 186 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 NUDT8Q8WV74 236 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 TSR2Q969E8 191 aaKnown RBP8.09□□□□□ -1.11
SPEN-202ENST00000438066 CCDC136Q96JN2 1154 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 CLUHP3Q96NS8 147 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 KIF2CQ99661 725 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 MYH16Q9H6N6 1097 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 FRRS1LQ9P0K9 344 aa8.09□□□□□ -1.11
SPEN-202ENST00000438066 ZNF214Q9UL59 606 aaPredicted RBP8.09□□□□□ -1.11
SPEN-202ENST00000438066 NLRP1Q9C000 1473 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 ZNF862O60290 1169 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 RFPL3O75679 317 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 LIG1P18858 919 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 GRK4P32298 578 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 CCNFP41002 786 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 C19orf57Q0VDD7 668 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 TMEM201Q5SNT2 666 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 CYFIP1Q7L576 1253 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 IL22RA1Q8N6P7 574 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 KISS1RQ969F8 398 aaPredicted RBP8.08□□□□□ -1.12
SPEN-202ENST00000438066 DHRS4Q9BTZ2 278 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 NRSN2Q9GZP1 204 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 ARHGEF4Q9NR80 690 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 KRT82Q9NSB4 513 aa8.08□□□□□ -1.12
SPEN-202ENST00000438066 KLF15Q9UIH9 416 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms