RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 SPATA32Q96LK8 384 aa7.41□□□□□ -1.22
ECHDC1-208ENST00000436638 TIMMDC1Q9NPL8 285 aa7.41□□□□□ -1.22
ECHDC1-208ENST00000436638 KCNQ5Q9NR82 932 aa7.41□□□□□ -1.22
ECHDC1-208ENST00000436638 HMG20BQ9P0W2 317 aa7.41□□□□□ -1.22
ECHDC1-208ENST00000436638 MKRN1Q9UHC7 482 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-208ENST00000436638 MAST3O60307 1309 aa7.41□□□□□ -1.22
ECHDC1-208ENST00000436638 PDS5AQ29RF7 1337 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-208ENST00000436638 IQCA1LA6NCM1 817 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 PALM3A6NDB9 673 aaPredicted RBP7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 SPATA31C2B4DYI2 1134 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 MARCH6O60337 910 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 LDHCP07864 332 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 MCAMP43121 646 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 GMPSP49915 693 aaPredicted RBP7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 MMP14P50281 582 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 RBM5P52756 815 aaKnown RBP eCLIP7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 PDE1AP54750 535 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 GSTO1P78417 241 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 MAP3K12Q12852 859 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 DACT2Q5SW24 774 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 KIAA0825Q8IV33 1275 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 OTUD7AQ8TE49 926 aaPredicted RBP7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 DPF2Q92785 391 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 NOL10Q9BSC4 688 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 PAG1Q9NWQ8 432 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 RAI14Q9P0K7 980 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 TTF2Q9UNY4 1162 aaKnown RBP7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 SUGT1Q9Y2Z0 365 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 AOX1Q06278 1338 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 SALL1Q9NSC2 1324 aa7.4□□□□□ -1.22
ECHDC1-208ENST00000436638 TIAM2Q8IVF5 1701 aa7.4□□□□□ -1.23
ECHDC1-208ENST00000436638 ARAP2Q8WZ64 1704 aa7.4□□□□□ -1.23
ECHDC1-208ENST00000436638 SBF1O95248 1867 aa7.4□□□□□ -1.23
ECHDC1-208ENST00000436638 CHD4Q14839 1912 aa7.4□□□□□ -1.23
ECHDC1-208ENST00000436638 DICER1Q9UPY3 1922 aaKnown RBP7.4□□□□□ -1.23
ECHDC1-208ENST00000436638 COL4A5P29400 1685 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 TMEM229AB2RXF0 380 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 GOLIM4O00461 696 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 IDH1O75874 414 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 RGS3P49796 1198 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 ATP1A2P50993 1020 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 SMTNP53814 917 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 FOXD4L6Q3SYB3 417 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 WDR44Q5JSH3 913 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 TSHZ3Q63HK5 1081 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 ZSCAN25Q6NSZ9 544 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 PI16Q6UXB8 463 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 FOXD4L3Q6VB84 417 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 SV2AQ7L0J3 742 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 CNTROBQ8N137 903 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 RILPL2Q969X0 211 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 SGSM3Q96HU1 749 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 HAUS7Q99871 368 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 MXD3Q9BW11 206 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 PPP1R12CQ9BZL4 782 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 STAP2Q9UGK3 403 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 CNOT7Q9UIV1 285 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 HACL1Q9UJ83 578 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 DYRK1BQ9Y463 629 aa7.39□□□□□ -1.23
ECHDC1-208ENST00000436638 TTC36A6NLP5 189 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 BACH1O14867 736 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 WIPF1O43516 503 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 MYO1BO43795 1136 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 MAP4K4O95819 1239 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 CYP2E1P05181 493 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 VSIG8P0DPA2 414 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 VEGFAP15692 232 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 ERCC3P19447 782 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 PRDX5P30044 214 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 CRKP46108 304 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 DLGAP5Q15398 846 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 KIF4BQ2VIQ3 1234 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 C4orf17Q53FE4 359 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 NAA16Q6N069 864 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 CERS5Q8N5B7 392 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 GPR161Q8N6U8 529 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 TPCN2Q8NHX9 752 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 RHBDD1Q8TEB9 315 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 TEKT1Q969V4 418 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 EVI5LQ96CN4 794 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 TRIM44Q96DX7 344 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 FSD1Q9BTV5 496 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 RRAGCQ9HB90 399 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 PIH1D3Q9NQM4 214 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 ADARB2Q9NS39 739 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 DNAAF2Q9NVR5 837 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 GPRC5DQ9NZD1 345 aa7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 MAFBQ9Y5Q3 323 aaPredicted RBP7.38□□□□□ -1.23
ECHDC1-208ENST00000436638 SALL3Q9BXA9 1300 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 BAG3O95817 575 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 RASA1P20936 1047 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 CYP7A1P22680 504 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 EPHX2P34913 555 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 EPS15P42566 896 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 CLDN10P78369 228 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 HDLBPQ00341 1268 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 CFAP100Q494V2 611 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 TBC1D10BQ4KMP7 808 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms