RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 SPATC1LQ9H0A9 340 aa21.5■■□□□ 1.03
SSR4P1-202ENST00000429427 MYH4Q9Y623 1939 aa21.49■■□□□ 1.03
SSR4P1-202ENST00000429427 ORC4O43929 436 aa21.49■■□□□ 1.03
SSR4P1-202ENST00000429427 HAND2P61296 217 aa21.49■■□□□ 1.03
SSR4P1-202ENST00000429427 TMEM132BQ14DG7 1078 aa21.49■■□□□ 1.03
SSR4P1-202ENST00000429427 CCL14Q16627 93 aa21.49■■□□□ 1.03
SSR4P1-202ENST00000429427 TBC1D10CQ8IV04 446 aa21.49■■□□□ 1.03
SSR4P1-202ENST00000429427 REPS2Q8NFH8 660 aa21.49■■□□□ 1.03
SSR4P1-202ENST00000429427 NUDT12Q9BQG2 462 aa21.49■■□□□ 1.03
SSR4P1-202ENST00000429427 RNF208Q9H0X6 261 aa21.49■■□□□ 1.03
SSR4P1-202ENST00000429427 DIAPH3Q9NSV4 1193 aa21.49■■□□□ 1.03
SSR4P1-202ENST00000429427 PPP1R9AQ9ULJ8 1098 aa21.49■■□□□ 1.03
SSR4P1-202ENST00000429427 RAD21O60216 631 aa21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 TTLL1O95922 423 aa21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 HMGCRP04035 888 aa21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 GJB1P08034 283 aa21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 XRCC5P13010 732 aaKnown RBP21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 UBXN2AP68543 259 aa21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 CCNA1P78396 465 aa21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 SAMD1Q6SPF0 538 aaPredicted RBP21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 RASGRP2Q7LDG7 609 aa21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 MB21D1Q8N884 522 aa21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 PAK6Q9NQU5 681 aaPredicted RBP21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 COL11A1P12107 1806 aaPredicted RBP21.48■■□□□ 1.03
SSR4P1-202ENST00000429427 PTPREP23469 700 aa21.47■■□□□ 1.03
SSR4P1-202ENST00000429427 GJA8P48165 433 aa21.47■■□□□ 1.03
SSR4P1-202ENST00000429427 NOVP48745 357 aa21.47■■□□□ 1.03
SSR4P1-202ENST00000429427 GRB14Q14449 540 aa21.47■■□□□ 1.03
SSR4P1-202ENST00000429427 MAP3K21Q5TCX8 1036 aa21.47■■□□□ 1.03
SSR4P1-202ENST00000429427 SKAP1Q86WV1 359 aa21.47■■□□□ 1.03
SSR4P1-202ENST00000429427 GMCL1P1Q8NEA9 526 aa21.47■■□□□ 1.03
SSR4P1-202ENST00000429427 FLRT1Q9NZU1 646 aa21.47■■□□□ 1.03
SSR4P1-202ENST00000429427 SYNPO2Q9UMS6 1093 aa21.47■■□□□ 1.03
SSR4P1-202ENST00000429427 VWA5AO00534 786 aa21.46■■□□□ 1.03
SSR4P1-202ENST00000429427 ERCC3P19447 782 aa21.46■■□□□ 1.03
SSR4P1-202ENST00000429427 MAP2K5Q13163 448 aa21.46■■□□□ 1.03
SSR4P1-202ENST00000429427 WDR78Q5VTH9 848 aa21.46■■□□□ 1.03
SSR4P1-202ENST00000429427 UBE2Q1Q7Z7E8 422 aa21.46■■□□□ 1.03
SSR4P1-202ENST00000429427 CCAR1Q8IX12 1150 aaKnown RBP21.46■■□□□ 1.03
SSR4P1-202ENST00000429427 APBA2Q99767 749 aa21.46■■□□□ 1.03
SSR4P1-202ENST00000429427 ZNF214Q9UL59 606 aaPredicted RBP21.46■■□□□ 1.03
SSR4P1-202ENST00000429427 ZNF236Q9UL36 1845 aa21.45■■□□□ 1.03
SSR4P1-202ENST00000429427 SLC15A5A6NIM6 579 aa21.45■■□□□ 1.02
SSR4P1-202ENST00000429427 TSPY2A6NKD2 308 aa21.45■■□□□ 1.02
SSR4P1-202ENST00000429427 RANBP6O60518 1105 aaKnown RBP21.45■■□□□ 1.02
SSR4P1-202ENST00000429427 IGHA2P01877 340 aa21.45■■□□□ 1.02
SSR4P1-202ENST00000429427 RGS2P41220 211 aa21.45■■□□□ 1.02
SSR4P1-202ENST00000429427 SHCBP1Q8NEM2 672 aa21.45■■□□□ 1.02
SSR4P1-202ENST00000429427 U2AF1L4Q8WU68 220 aaKnown RBP21.45■■□□□ 1.02
SSR4P1-202ENST00000429427 NEDD4P46934 1319 aa21.45■■□□□ 1.02
SSR4P1-202ENST00000429427 LAMA4Q16363 1823 aa21.45■■□□□ 1.02
SSR4P1-202ENST00000429427 HIP1O00291 1037 aa21.44■■□□□ 1.02
SSR4P1-202ENST00000429427 PLS1Q14651 629 aa21.44■■□□□ 1.02
SSR4P1-202ENST00000429427 NPLOC4Q8TAT6 608 aa21.44■■□□□ 1.02
SSR4P1-202ENST00000429427 STAG1Q8WVM7 1258 aa21.44■■□□□ 1.02
SSR4P1-202ENST00000429427 DEFB118Q96PH6 123 aa21.44■■□□□ 1.02
SSR4P1-202ENST00000429427 SLF1Q9BQI6 1058 aa21.44■■□□□ 1.02
SSR4P1-202ENST00000429427 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.44■■□□□ 1.02
SSR4P1-202ENST00000429427 HOXC6P09630 235 aa21.43■■□□□ 1.02
SSR4P1-202ENST00000429427 PRKAR2AP13861 404 aaKnown RBP21.43■■□□□ 1.02
SSR4P1-202ENST00000429427 ZKSCAN1P17029 563 aaPredicted RBP21.43■■□□□ 1.02
SSR4P1-202ENST00000429427 MFAP1P55081 439 aaKnown RBP21.43■■□□□ 1.02
SSR4P1-202ENST00000429427 RRP12Q5JTH9 1297 aaKnown RBP21.43■■□□□ 1.02
SSR4P1-202ENST00000429427 AKNAD1Q5T1N1 836 aa21.43■■□□□ 1.02
SSR4P1-202ENST00000429427 SLFN13Q68D06 897 aa21.43■■□□□ 1.02
SSR4P1-202ENST00000429427 CHMP4CQ96CF2 233 aa21.43■■□□□ 1.02
SSR4P1-202ENST00000429427 STX8Q9UNK0 236 aa21.43■■□□□ 1.02
SSR4P1-202ENST00000429427 COBLO75128 1261 aa21.42■■□□□ 1.02
SSR4P1-202ENST00000429427 SGPL1O95470 568 aa21.42■■□□□ 1.02
SSR4P1-202ENST00000429427 CHMLP26374 656 aa21.42■■□□□ 1.02
SSR4P1-202ENST00000429427 ADORA2AP29274 412 aa21.42■■□□□ 1.02
SSR4P1-202ENST00000429427 CACNB2Q08289 660 aaPredicted RBP21.42■■□□□ 1.02
SSR4P1-202ENST00000429427 DSCC1Q9BVC3 393 aa21.42■■□□□ 1.02
SSR4P1-202ENST00000429427 CRISPLD2Q9H0B8 497 aa21.42■■□□□ 1.02
SSR4P1-202ENST00000429427 CWC22Q9HCG8 908 aaKnown RBP21.42■■□□□ 1.02
SSR4P1-202ENST00000429427 RPTORQ8N122 1335 aa21.41■■□□□ 1.02
SSR4P1-202ENST00000429427 RCSD1Q6JBY9 416 aa21.41■■□□□ 1.02
SSR4P1-202ENST00000429427 NCAPG2Q86XI2 1143 aa21.41■■□□□ 1.02
SSR4P1-202ENST00000429427 RIOX2Q8IUF8 465 aa21.41■■□□□ 1.02
SSR4P1-202ENST00000429427 GMCL1Q96IK5 515 aa21.41■■□□□ 1.02
SSR4P1-202ENST00000429427 MROH8Q9H579 483 aa21.41■■□□□ 1.02
SSR4P1-202ENST00000429427 TOMM22Q9NS69 142 aa21.41■■□□□ 1.02
SSR4P1-202ENST00000429427 RIPK3Q9Y572 518 aa21.41■■□□□ 1.02
SSR4P1-202ENST00000429427 IVNS1ABPQ9Y6Y0 642 aa21.41■■□□□ 1.02
SSR4P1-202ENST00000429427 BMP3P12645 472 aa21.4■■□□□ 1.02
SSR4P1-202ENST00000429427 MCCP23508 829 aa21.4■■□□□ 1.02
SSR4P1-202ENST00000429427 STAT3P40763 770 aa21.4■■□□□ 1.02
SSR4P1-202ENST00000429427 PRPF38AQ8NAV1 312 aaKnown RBP21.4■■□□□ 1.02
SSR4P1-202ENST00000429427 TCP11L1Q9NUJ3 509 aa21.4■■□□□ 1.02
SSR4P1-202ENST00000429427 STRNO43815 780 aa21.39■■□□□ 1.01
SSR4P1-202ENST00000429427 CCND3P30281 292 aaPredicted RBP21.39■■□□□ 1.01
SSR4P1-202ENST00000429427 MFSD6Q6ZSS7 791 aa21.39■■□□□ 1.01
SSR4P1-202ENST00000429427 TRMT44Q8IYL2 757 aaKnown RBP21.39■■□□□ 1.01
SSR4P1-202ENST00000429427 KIFC2Q96AC6 838 aa21.39■■□□□ 1.01
SSR4P1-202ENST00000429427 SLC38A10Q9HBR0 1119 aa21.39■■□□□ 1.01
SSR4P1-202ENST00000429427 FEM1BQ9UK73 627 aa21.39■■□□□ 1.01
SSR4P1-202ENST00000429427 RAD50Q92878 1312 aa21.38■■□□□ 1.01
SSR4P1-202ENST00000429427 TMEM232C9JQI7 657 aa21.38■■□□□ 1.01
SSR4P1-202ENST00000429427 ZNF213O14771 459 aa21.38■■□□□ 1.01
SSR4P1-202ENST00000429427 SLC25A27O95847 323 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms