RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PLCD1P51178 756 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 NAP1L1P55209 391 aaKnown RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 KARSQ15046 597 aaKnown RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 WASHC4Q2M389 1173 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 SLC9C2Q5TAH2 1124 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 PPP4R3AQ6IN85 833 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 KDM7AQ6ZMT4 941 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 CCDC8Q9H0W5 538 aaPredicted RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 ACTR5Q9H9F9 607 aaPredicted RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 NEURL1BA8MQ27 555 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 TULP1O00294 542 aaPredicted RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 RHOXF2BP0C7M4 288 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 ACTN3Q08043 901 aaPredicted RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 CDCA2Q69YH5 1023 aaPredicted RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 MB21D2Q8IYB1 491 aaPredicted RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 STK11IPQ8N1F8 1099 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 RHOXF2Q9BQY4 288 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 LRRC2Q9BYS8 371 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 PXDNQ92626 1479 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 MPDZO75970 2070 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 SCN4AP35499 1836 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 RAPGEF3O95398 923 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 LCA5LO95447 670 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 POLR3DP05423 398 aaPredicted RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 TNNI3KQ59H18 835 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 APOA5Q6Q788 366 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 SEC62Q99442 399 aaKnown RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 AATFQ9NY61 560 aaKnown RBP eCLIP5.77□□□□□ -1.49
RIF1-203ENST00000428287 FPGT-TNNI3KV9GXZ4 949 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 SHANK3Q9BYB0 1731 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 CPLX2Q6PUV4 134 aaKnown RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 GPATCH11Q8N954 259 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 ZNF507Q8TCN5 953 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 SUCLG2Q96I99 432 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 DNAJC7Q99615 494 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 MTRQ99707 1265 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 MOV10L1Q9BXT6 1211 aaKnown RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 STIM2Q9P246 746 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 TCP1P17987 556 aaKnown RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 ADCY2Q08462 1091 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 EPHA10Q5JZY3 1008 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 CEP85LQ5SZL2 805 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 ARFGAP2Q8N6H7 521 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 FBXO2Q9UK22 296 aaPredicted RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 TOGARAM1Q9Y4F4 1720 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 MAST3O60307 1309 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 H7C1W4 665 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 CALRP27797 417 aaKnown RBP5.76□□□□□ -1.49
RIF1-203ENST00000428287 IQCA1Q86XH1 822 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 RNF10Q8N5U6 811 aaKnown RBP5.76□□□□□ -1.49
RIF1-203ENST00000428287 CAPN11Q9UMQ6 739 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 EZRP15311 586 aaKnown RBP5.76□□□□□ -1.49
RIF1-203ENST00000428287 CCNG1P51959 295 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 TEFQ10587 303 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 PNOCQ13519 176 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 USP49Q70CQ1 688 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 ARL8AQ96BM9 186 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 NEUROD6Q96NK8 337 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 ZNF233A6NK53 670 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 TRAPPC3O43617 180 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 EPHB4P54760 987 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 RWDD2BP57060 319 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 ITGB3BPQ13352 177 aaPredicted RBP5.76□□□□□ -1.49
RIF1-203ENST00000428287 CYP26C1Q6V0L0 522 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 EP400NLQ6ZTU2 488 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 IGDCC4Q8TDY8 1250 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 CCT6BQ92526 530 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 ACSBG1Q96GR2 724 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 SCN8AQ9UQD0 1980 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 PTPRFP10586 1907 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 TTC26A0AVF1 554 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 GOLGA8KD6RF30 607 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 KRT86O43790 486 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 OPA1O60313 960 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 CDC37Q16543 378 aaPredicted RBP5.76□□□□□ -1.49
RIF1-203ENST00000428287 ZC3H12AQ5D1E8 599 aaKnown RBP5.76□□□□□ -1.49
RIF1-203ENST00000428287 NOSTRINQ8IVI9 506 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 JAKMIP2Q96AA8 810 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 CAPN7Q9Y6W3 813 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 SHTN1A0MZ66 631 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 FESP07332 822 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 LRCH2Q5VUJ6 765 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 CYB5D1Q6P9G0 228 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 FOXR2Q6PJQ5 311 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 CHGBP05060 677 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 MARCKSP29966 332 aaPredicted RBP5.76□□□□□ -1.49
RIF1-203ENST00000428287 CASP14P31944 242 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 SLC8A1P32418 973 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 GUCY1B3Q02153 619 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 PPFIBP1Q86W92 1011 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 ZSCAN29Q8IWY8 852 aaPredicted RBP5.76□□□□□ -1.49
RIF1-203ENST00000428287 CCDC134Q9H6E4 229 aa5.76□□□□□ -1.49
RIF1-203ENST00000428287 DOCK4Q8N1I0 1966 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 FNDC1Q4ZHG4 1894 aaPredicted RBP5.75□□□□□ -1.49
RIF1-203ENST00000428287 HMGB1P1B2RPK0 211 aaPredicted RBP5.75□□□□□ -1.49
RIF1-203ENST00000428287 KIF28PB7ZC32 967 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 CDKL5O76039 1030 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 GSTA1P08263 222 aa5.75□□□□□ -1.49
RIF1-203ENST00000428287 N4BP2L2Q92802 583 aaPredicted RBP5.75□□□□□ -1.49
RIF1-203ENST00000428287 MAP3K2Q9Y2U5 619 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms