RNA–Protein interactions for RNA: ENST00000427786.1

PPP1CB-206, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 4

Gene PPP1CB, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-206ENST00000427786 ZMYM6O95789 1325 aa23.33■■□□□ 1.32
PPP1CB-206ENST00000427786 ZKSCAN1P17029 563 aaPredicted RBP23.32■■□□□ 1.32
PPP1CB-206ENST00000427786 CAPN2P17655 700 aa23.32■■□□□ 1.32
PPP1CB-206ENST00000427786 NMIQ13287 307 aaPredicted RBP23.32■■□□□ 1.32
PPP1CB-206ENST00000427786 ALX1Q15699 326 aa23.32■■□□□ 1.32
PPP1CB-206ENST00000427786 FAM83BQ5T0W9 1011 aa23.32■■□□□ 1.32
PPP1CB-206ENST00000427786 REPS2Q8NFH8 660 aa23.32■■□□□ 1.32
PPP1CB-206ENST00000427786 MKL1Q969V6 931 aa23.32■■□□□ 1.32
PPP1CB-206ENST00000427786 MTMR4Q9NYA4 1195 aa23.32■■□□□ 1.32
PPP1CB-206ENST00000427786 PPP1R9AQ9ULJ8 1098 aa23.32■■□□□ 1.32
PPP1CB-206ENST00000427786 NDUFB10O96000 172 aa23.31■■□□□ 1.32
PPP1CB-206ENST00000427786 PRKAR2AP13861 404 aaKnown RBP23.31■■□□□ 1.32
PPP1CB-206ENST00000427786 PDE4BQ07343 736 aa23.31■■□□□ 1.32
PPP1CB-206ENST00000427786 TMEM132BQ14DG7 1078 aa23.31■■□□□ 1.32
PPP1CB-206ENST00000427786 MCMDC2Q4G0Z9 681 aa23.31■■□□□ 1.32
PPP1CB-206ENST00000427786 ZNF444Q8N0Y2 327 aaPredicted RBP23.31■■□□□ 1.32
PPP1CB-206ENST00000427786 HMX1Q9NP08 348 aaPredicted RBP23.31■■□□□ 1.32
PPP1CB-206ENST00000427786 FLRT1Q9NZU1 646 aa23.31■■□□□ 1.32
PPP1CB-206ENST00000427786 ALPK3Q96L96 1907 aa23.31■■□□□ 1.32
PPP1CB-206ENST00000427786 F5H6K3 240 aa23.3■■□□□ 1.32
PPP1CB-206ENST00000427786 FARP2O94887 1054 aaPredicted RBP23.3■■□□□ 1.32
PPP1CB-206ENST00000427786 ERCC3P19447 782 aa23.3■■□□□ 1.32
PPP1CB-206ENST00000427786 KLRC3Q07444 240 aa23.3■■□□□ 1.32
PPP1CB-206ENST00000427786 NUP88Q99567 741 aaPredicted RBP23.3■■□□□ 1.32
PPP1CB-206ENST00000427786 TRIM6-TRIM34B2RNG4 842 aa23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 VWA5AO00534 786 aa23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 SLC3A2P08195 630 aaKnown RBP23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 FGRP09769 529 aa23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 CTDSPL2Q05D32 466 aa23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 CACNB2Q08289 660 aaPredicted RBP23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 WDR78Q5VTH9 848 aa23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 NPLOC4Q8TAT6 608 aa23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 CWC22Q9HCG8 908 aaKnown RBP23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 CLIP2Q9UDT6 1046 aa23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 ZNF214Q9UL59 606 aaPredicted RBP23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 IVNS1ABPQ9Y6Y0 642 aa23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 CCDC171Q6TFL3 1326 aa23.29■■□□□ 1.32
PPP1CB-206ENST00000427786 TTLL1O95922 423 aa23.28■■□□□ 1.32
PPP1CB-206ENST00000427786 TSPY3P0CV98 308 aa23.28■■□□□ 1.32
PPP1CB-206ENST00000427786 TSPY8P0CW00 308 aa23.28■■□□□ 1.32
PPP1CB-206ENST00000427786 HSPD1P10809 573 aaKnown RBP23.28■■□□□ 1.32
PPP1CB-206ENST00000427786 SDSP20132 328 aa23.28■■□□□ 1.32
PPP1CB-206ENST00000427786 TFAP4Q01664 338 aa23.28■■□□□ 1.32
PPP1CB-206ENST00000427786 FAM47AQ5JRC9 791 aa23.28■■□□□ 1.32
PPP1CB-206ENST00000427786 GMCL1P1Q8NEA9 526 aa23.28■■□□□ 1.32
PPP1CB-206ENST00000427786 RILPL2Q969X0 211 aa23.28■■□□□ 1.32
PPP1CB-206ENST00000427786 MROH8Q9H579 483 aa23.28■■□□□ 1.32
PPP1CB-206ENST00000427786 ZNFX1Q9P2E3 1918 aaKnown RBP23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 STRNO43815 780 aa23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 FGAP02671 866 aa23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 PDE4AP27815 886 aa23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 ADORA2AP29274 412 aa23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 NOVP48745 357 aa23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 MNX1P50219 401 aaPredicted RBP23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 IRX6P78412 446 aaPredicted RBP23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 ABRAQ8N0Z2 381 aa23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 LRRC47Q8N1G4 583 aaKnown RBP23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 INCENPQ9NQS7 918 aa23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 OGDHLQ9ULD0 1010 aa23.27■■□□□ 1.32
PPP1CB-206ENST00000427786 PLXNA1Q9UIW2 1896 aa23.26■■□□□ 1.31
PPP1CB-206ENST00000427786 ORC4O43929 436 aa23.26■■□□□ 1.31
PPP1CB-206ENST00000427786 TFRCP02786 760 aaKnown RBP23.26■■□□□ 1.31
PPP1CB-206ENST00000427786 RIOX2Q8IUF8 465 aa23.26■■□□□ 1.31
PPP1CB-206ENST00000427786 ANKLE1Q8NAG6 615 aa23.26■■□□□ 1.31
PPP1CB-206ENST00000427786 IL17RBQ9NRM6 502 aa23.26■■□□□ 1.31
PPP1CB-206ENST00000427786 RAD21O60216 631 aa23.25■■□□□ 1.31
PPP1CB-206ENST00000427786 SLC25A27O95847 323 aa23.25■■□□□ 1.31
PPP1CB-206ENST00000427786 CCND3P30281 292 aaPredicted RBP23.25■■□□□ 1.31
PPP1CB-206ENST00000427786 PLS1Q14651 629 aa23.25■■□□□ 1.31
PPP1CB-206ENST00000427786 SLF1Q9BQI6 1058 aa23.25■■□□□ 1.31
PPP1CB-206ENST00000427786 NBPF3Q9H094 633 aa23.25■■□□□ 1.31
PPP1CB-206ENST00000427786 COBLO75128 1261 aa23.24■■□□□ 1.31
PPP1CB-206ENST00000427786 OLFML2BQ68BL8 750 aa23.24■■□□□ 1.31
PPP1CB-206ENST00000427786 LHX8Q68G74 356 aa23.24■■□□□ 1.31
PPP1CB-206ENST00000427786 SAMD1Q6SPF0 538 aaPredicted RBP23.24■■□□□ 1.31
PPP1CB-206ENST00000427786 NCAPG2Q86XI2 1143 aa23.24■■□□□ 1.31
PPP1CB-206ENST00000427786 DIS3LQ8TF46 1054 aaKnown RBP23.24■■□□□ 1.31
PPP1CB-206ENST00000427786 TSPY2A6NKD2 308 aa23.22■■□□□ 1.31
PPP1CB-206ENST00000427786 ATP2A1O14983 1001 aa23.22■■□□□ 1.31
PPP1CB-206ENST00000427786 NMT2O60551 498 aa23.22■■□□□ 1.31
PPP1CB-206ENST00000427786 GSPT1P15170 499 aaKnown RBP23.22■■□□□ 1.31
PPP1CB-206ENST00000427786 STAT3P40763 770 aa23.22■■□□□ 1.31
PPP1CB-206ENST00000427786 MFSD14CQ5VZR4 134 aa23.22■■□□□ 1.31
PPP1CB-206ENST00000427786 PRPF38AQ8NAV1 312 aaKnown RBP23.22■■□□□ 1.31
PPP1CB-206ENST00000427786 TRPV1Q8NER1 839 aa23.22■■□□□ 1.31
PPP1CB-206ENST00000427786 GMCL1Q96IK5 515 aa23.22■■□□□ 1.31
PPP1CB-206ENST00000427786 PAWRQ96IZ0 340 aaKnown RBP23.22■■□□□ 1.31
PPP1CB-206ENST00000427786 HTATIP2Q9BUP3 242 aa23.22■■□□□ 1.31
PPP1CB-206ENST00000427786 CEP290O15078 2479 aa23.21■■□□□ 1.31
PPP1CB-206ENST00000427786 DNAH12Q6ZR08 3092 aa23.21■■□□□ 1.31
PPP1CB-206ENST00000427786 CYBAP13498 195 aa23.21■■□□□ 1.31
PPP1CB-206ENST00000427786 CYP2C19P33261 490 aa23.21■■□□□ 1.31
PPP1CB-206ENST00000427786 SLFN13Q68D06 897 aa23.21■■□□□ 1.31
PPP1CB-206ENST00000427786 TEX13BQ9BXU2 312 aa23.21■■□□□ 1.31
PPP1CB-206ENST00000427786 FEM1BQ9UK73 627 aa23.21■■□□□ 1.31
PPP1CB-206ENST00000427786 FCER1AP12319 257 aa23.2■■□□□ 1.3
PPP1CB-206ENST00000427786 COPB2P35606 906 aa23.2■■□□□ 1.3
PPP1CB-206ENST00000427786 PPP4R3BQ5MIZ7 849 aa23.2■■□□□ 1.3
PPP1CB-206ENST00000427786 DPP9Q86TI2 863 aa23.2■■□□□ 1.3
PPP1CB-206ENST00000427786 TBC1D10CQ8IV04 446 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms