RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 SGSM2O43147 1006 aa20.37■□□□□ 0.85
LMCD1-204ENST00000426878 SH3TC2Q8TF17 1288 aa20.37■□□□□ 0.85
LMCD1-204ENST00000426878 IMMTQ16891 758 aaKnown RBP20.36■□□□□ 0.85
LMCD1-204ENST00000426878 GPR142Q7Z601 462 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 CCAR1Q8IX12 1150 aaKnown RBP20.36■□□□□ 0.85
LMCD1-204ENST00000426878 LRRC47Q8N1G4 583 aaKnown RBP20.36■□□□□ 0.85
LMCD1-204ENST00000426878 SOCS4Q8WXH5 440 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 ATG4CQ96DT6 458 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 TOMM22Q9NS69 142 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 FBXO28Q9NVF7 368 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 PPP1R9AQ9ULJ8 1098 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 STX8Q9UNK0 236 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 RAD21O60216 631 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 ADCY3O60266 1144 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 NMT2O60551 498 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 SOX10P56693 466 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 RRP12Q5JTH9 1297 aaKnown RBP20.36■□□□□ 0.85
LMCD1-204ENST00000426878 PLEKHH3Q7Z736 793 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 SHCBP1Q8NEM2 672 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 USP6NLQ92738 828 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 GMCL1Q96IK5 515 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 SPATC1LQ9H0A9 340 aa20.36■□□□□ 0.85
LMCD1-204ENST00000426878 KIAA0100Q14667 2235 aaKnown RBP20.35■□□□□ 0.85
LMCD1-204ENST00000426878 PLXNB2O15031 1838 aa20.35■□□□□ 0.85
LMCD1-204ENST00000426878 XRCC5P13010 732 aaKnown RBP20.35■□□□□ 0.85
LMCD1-204ENST00000426878 MORN1Q5T089 497 aa20.35■□□□□ 0.85
LMCD1-204ENST00000426878 SLFN13Q68D06 897 aa20.35■□□□□ 0.85
LMCD1-204ENST00000426878 ESR2Q92731 530 aa20.35■□□□□ 0.85
LMCD1-204ENST00000426878 TTC14Q96N46 770 aa20.35■□□□□ 0.85
LMCD1-204ENST00000426878 NUP88Q99567 741 aaPredicted RBP20.35■□□□□ 0.85
LMCD1-204ENST00000426878 NUDT12Q9BQG2 462 aa20.35■□□□□ 0.85
LMCD1-204ENST00000426878 VWA5AO00534 786 aa20.34■□□□□ 0.85
LMCD1-204ENST00000426878 BMP3P12645 472 aa20.34■□□□□ 0.85
LMCD1-204ENST00000426878 SKAP1Q86WV1 359 aa20.34■□□□□ 0.85
LMCD1-204ENST00000426878 PRPF38AQ8NAV1 312 aaKnown RBP20.34■□□□□ 0.85
LMCD1-204ENST00000426878 SLF1Q9BQI6 1058 aa20.34■□□□□ 0.85
LMCD1-204ENST00000426878 MOV10L1Q9BXT6 1211 aaKnown RBP20.34■□□□□ 0.85
LMCD1-204ENST00000426878 FEM1BQ9UK73 627 aa20.34■□□□□ 0.85
LMCD1-204ENST00000426878 NEDD4P46934 1319 aa20.34■□□□□ 0.85
LMCD1-204ENST00000426878 RBBP6Q7Z6E9 1792 aaKnown RBP20.34■□□□□ 0.85
LMCD1-204ENST00000426878 UBXN2AP68543 259 aa20.33■□□□□ 0.84
LMCD1-204ENST00000426878 PTH1RQ03431 593 aa20.33■□□□□ 0.84
LMCD1-204ENST00000426878 TMEM132BQ14DG7 1078 aa20.33■□□□□ 0.84
LMCD1-204ENST00000426878 REPS2Q8NFH8 660 aa20.33■□□□□ 0.84
LMCD1-204ENST00000426878 NKX2-3Q8TAU0 364 aa20.33■□□□□ 0.84
LMCD1-204ENST00000426878 SLC15A5A6NIM6 579 aa20.32■□□□□ 0.84
LMCD1-204ENST00000426878 PLA2G6O60733 806 aa20.32■□□□□ 0.84
LMCD1-204ENST00000426878 TOP1P11387 765 aaKnown RBP20.32■□□□□ 0.84
LMCD1-204ENST00000426878 ELNP15502 786 aa20.32■□□□□ 0.84
LMCD1-204ENST00000426878 PTPREP23469 700 aa20.32■□□□□ 0.84
LMCD1-204ENST00000426878 RCSD1Q6JBY9 416 aa20.32■□□□□ 0.84
LMCD1-204ENST00000426878 MAP4K1Q92918 833 aa20.32■□□□□ 0.84
LMCD1-204ENST00000426878 TMEM106CQ9BVX2 250 aa20.32■□□□□ 0.84
LMCD1-204ENST00000426878 MROH8Q9H579 483 aa20.32■□□□□ 0.84
LMCD1-204ENST00000426878 CNNM2Q9H8M5 875 aa20.32■□□□□ 0.84
LMCD1-204ENST00000426878 U3KPZ7 1027 aaPredicted RBP20.32■□□□□ 0.84
LMCD1-204ENST00000426878 STRNO43815 780 aa20.31■□□□□ 0.84
LMCD1-204ENST00000426878 SLC25A27O95847 323 aa20.31■□□□□ 0.84
LMCD1-204ENST00000426878 ERCC3P19447 782 aa20.31■□□□□ 0.84
LMCD1-204ENST00000426878 RGS2P41220 211 aa20.31■□□□□ 0.84
LMCD1-204ENST00000426878 GRB14Q14449 540 aa20.31■□□□□ 0.84
LMCD1-204ENST00000426878 CCDC178Q5BJE1 867 aa20.31■□□□□ 0.84
LMCD1-204ENST00000426878 TRMT44Q8IYL2 757 aaKnown RBP20.31■□□□□ 0.84
LMCD1-204ENST00000426878 TMEM47Q9BQJ4 181 aa20.31■□□□□ 0.84
LMCD1-204ENST00000426878 KRT23Q9C075 422 aa20.31■□□□□ 0.84
LMCD1-204ENST00000426878 CWC22Q9HCG8 908 aaKnown RBP20.31■□□□□ 0.84
LMCD1-204ENST00000426878 BIN2Q9UBW5 565 aaPredicted RBP20.31■□□□□ 0.84
LMCD1-204ENST00000426878 ZNF214Q9UL59 606 aaPredicted RBP20.31■□□□□ 0.84
LMCD1-204ENST00000426878 IVNS1ABPQ9Y6Y0 642 aa20.31■□□□□ 0.84
LMCD1-204ENST00000426878 COL11A1P12107 1806 aaPredicted RBP20.31■□□□□ 0.84
LMCD1-204ENST00000426878 ATP2A1O14983 1001 aa20.3■□□□□ 0.84
LMCD1-204ENST00000426878 FDX1P10109 184 aa20.3■□□□□ 0.84
LMCD1-204ENST00000426878 SLC1A4P43007 532 aa20.3■□□□□ 0.84
LMCD1-204ENST00000426878 MAP2K5Q13163 448 aa20.3■□□□□ 0.84
LMCD1-204ENST00000426878 SAMD1Q6SPF0 538 aaPredicted RBP20.3■□□□□ 0.84
LMCD1-204ENST00000426878 DGKHQ86XP1 1220 aa20.3■□□□□ 0.84
LMCD1-204ENST00000426878 RIOX2Q8IUF8 465 aa20.3■□□□□ 0.84
LMCD1-204ENST00000426878 ESYT1Q9BSJ8 1104 aa20.3■□□□□ 0.84
LMCD1-204ENST00000426878 PPP4R2Q9NY27 417 aa20.3■□□□□ 0.84
LMCD1-204ENST00000426878 POTEFA5A3E0 1075 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 KDM4AO75164 1064 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 HMGCRP04035 888 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 INHAP05111 366 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 HOXC6P09630 235 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 CYP2B6P20813 491 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 MCCP23508 829 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 COPB2P35606 906 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 STAT3P40763 770 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 PLS1Q14651 629 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 MTFR1Q15390 333 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 WDR78Q5VTH9 848 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 FAM160B2Q86V87 743 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 IQCA1Q86XH1 822 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 ABRAQ8N0Z2 381 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 CHURC1Q8WUH1 139 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 DCAF4Q8WV16 495 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 ANKS1AQ92625 1134 aa20.29■□□□□ 0.84
LMCD1-204ENST00000426878 B4E1Z4 1266 aa20.28■□□□□ 0.84
LMCD1-204ENST00000426878 TMEM232C9JQI7 657 aa20.28■□□□□ 0.84
LMCD1-204ENST00000426878 CYP21A2P08686 494 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms