RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 WDR78Q5VTH9 848 aa15.16■□□□□ 0.02
GPC1-204ENST00000426280 UBE2Q1Q7Z7E8 422 aa15.16■□□□□ 0.02
GPC1-204ENST00000426280 U2AF1L4Q8WU68 220 aaKnown RBP15.16■□□□□ 0.02
GPC1-204ENST00000426280 GTF3C2Q8WUA4 911 aaPredicted RBP15.16■□□□□ 0.02
GPC1-204ENST00000426280 DEFB118Q96PH6 123 aa15.16■□□□□ 0.02
GPC1-204ENST00000426280 SPATC1LQ9H0A9 340 aa15.16■□□□□ 0.02
GPC1-204ENST00000426280 CCDC171Q6TFL3 1326 aa15.16■□□□□ 0.02
GPC1-204ENST00000426280 PARP14Q460N5 1801 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 A0A0G2JMZ2 1700 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 COBLO75128 1261 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 SGPL1O95470 568 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 IGHA2P01877 340 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 TSPY3P0CV98 308 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 TSPY8P0CW00 308 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 ERCC3P19447 782 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 PDE4BQ07343 736 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 CACNB2Q08289 660 aaPredicted RBP15.15■□□□□ 0.02
GPC1-204ENST00000426280 MAP2K5Q13163 448 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 TTC22Q5TAA0 569 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 MAP3K21Q5TCX8 1036 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 TBC1D10CQ8IV04 446 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 SH2D4AQ9H788 454 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 PAK6Q9NQU5 681 aaPredicted RBP15.15■□□□□ 0.02
GPC1-204ENST00000426280 PPP1R9AQ9ULJ8 1098 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 RIPK3Q9Y572 518 aa15.15■□□□□ 0.02
GPC1-204ENST00000426280 KIAA0100Q14667 2235 aaKnown RBP15.15■□□□□ 0.02
GPC1-204ENST00000426280 VWA5AO00534 786 aa15.14■□□□□ 0.01
GPC1-204ENST00000426280 HMGCRP04035 888 aa15.14■□□□□ 0.01
GPC1-204ENST00000426280 XRCC5P13010 732 aaKnown RBP15.14■□□□□ 0.01
GPC1-204ENST00000426280 CCND3P30281 292 aaPredicted RBP15.14■□□□□ 0.01
GPC1-204ENST00000426280 MNX1P50219 401 aaPredicted RBP15.14■□□□□ 0.01
GPC1-204ENST00000426280 PLS1Q14651 629 aa15.14■□□□□ 0.01
GPC1-204ENST00000426280 CCAR1Q8IX12 1150 aaKnown RBP15.14■□□□□ 0.01
GPC1-204ENST00000426280 CCDC136Q96JN2 1154 aa15.14■□□□□ 0.01
GPC1-204ENST00000426280 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.14■□□□□ 0.01
GPC1-204ENST00000426280 GOPCQ9HD26 462 aa15.14■□□□□ 0.01
GPC1-204ENST00000426280 PLIN4Q96Q06 1357 aa15.13■□□□□ 0.01
GPC1-204ENST00000426280 SLC15A5A6NIM6 579 aa15.13■□□□□ 0.01
GPC1-204ENST00000426280 RANBP6O60518 1105 aaKnown RBP15.13■□□□□ 0.01
GPC1-204ENST00000426280 NOVP48745 357 aa15.13■□□□□ 0.01
GPC1-204ENST00000426280 CCNA1P78396 465 aa15.13■□□□□ 0.01
GPC1-204ENST00000426280 GRB14Q14449 540 aa15.13■□□□□ 0.01
GPC1-204ENST00000426280 TRPV1Q8NER1 839 aa15.13■□□□□ 0.01
GPC1-204ENST00000426280 CRISPLD2Q9H0B8 497 aa15.13■□□□□ 0.01
GPC1-204ENST00000426280 ZNF214Q9UL59 606 aaPredicted RBP15.13■□□□□ 0.01
GPC1-204ENST00000426280 MKI67P46013 3256 aaKnown RBP15.13■□□□□ 0.01
GPC1-204ENST00000426280 ORC4O43929 436 aa15.12■□□□□ 0.01
GPC1-204ENST00000426280 TTLL1O95922 423 aa15.12■□□□□ 0.01
GPC1-204ENST00000426280 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
GPC1-204ENST00000426280 RGS2P41220 211 aa15.12■□□□□ 0.01
GPC1-204ENST00000426280 RRP12Q5JTH9 1297 aaKnown RBP15.12■□□□□ 0.01
GPC1-204ENST00000426280 SLFN13Q68D06 897 aa15.12■□□□□ 0.01
GPC1-204ENST00000426280 NCAPG2Q86XI2 1143 aa15.12■□□□□ 0.01
GPC1-204ENST00000426280 TICAM2Q86XR7 235 aa15.12■□□□□ 0.01
GPC1-204ENST00000426280 DIS3LQ8TF46 1054 aaKnown RBP15.12■□□□□ 0.01
GPC1-204ENST00000426280 SOCS4Q8WXH5 440 aa15.12■□□□□ 0.01
GPC1-204ENST00000426280 RPTORQ8N122 1335 aa15.12■□□□□ 0.01
GPC1-204ENST00000426280 COL11A1P12107 1806 aaPredicted RBP15.11■□□□□ 0.01
GPC1-204ENST00000426280 TSPY2A6NKD2 308 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 TFRCP02786 760 aaKnown RBP15.11■□□□□ 0.01
GPC1-204ENST00000426280 SLC3A2P08195 630 aaKnown RBP15.11■□□□□ 0.01
GPC1-204ENST00000426280 HOXC6P09630 235 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 MCCP23508 829 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 ADORA2AP29274 412 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 CYP2C19P33261 490 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 STAT3P40763 770 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 SNAP25P60880 206 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 PRAMEF19Q5SWL8 479 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 RCSD1Q6JBY9 416 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 RIOX2Q8IUF8 465 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 SHCBP1Q8NEM2 672 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 APBA2Q99767 749 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 SLF1Q9BQI6 1058 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 ZNF287Q9HBT7 754 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 DIAPH3Q9NSV4 1193 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 NEDD4P46934 1319 aa15.11■□□□□ 0.01
GPC1-204ENST00000426280 MYH4Q9Y623 1939 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 PGK2P07205 417 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 ZKSCAN1P17029 563 aaPredicted RBP15.1■□□□□ 0.01
GPC1-204ENST00000426280 TAL1P17542 331 aaPredicted RBP15.1■□□□□ 0.01
GPC1-204ENST00000426280 LHX8Q68G74 356 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 KCTD1Q719H9 257 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 CENPQQ7L2Z9 268 aaPredicted RBP15.1■□□□□ 0.01
GPC1-204ENST00000426280 CPXCR1Q8N123 301 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 MB21D1Q8N884 522 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 GMCL1P1Q8NEA9 526 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 KIFC2Q96AC6 838 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 ZKSCAN3Q9BRR0 538 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 CWC22Q9HCG8 908 aaKnown RBP15.1■□□□□ 0.01
GPC1-204ENST00000426280 RAVER2Q9HCJ3 691 aaKnown RBP15.1■□□□□ 0.01
GPC1-204ENST00000426280 HMX1Q9NP08 348 aaPredicted RBP15.1■□□□□ 0.01
GPC1-204ENST00000426280 TOMM22Q9NS69 142 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 PCDH10Q9P2E7 1040 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 STX8Q9UNK0 236 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 MTMR7Q9Y216 660 aa15.1■□□□□ 0.01
GPC1-204ENST00000426280 TMEM232C9JQI7 657 aa15.09■□□□□ 0.01
GPC1-204ENST00000426280 CHMLP26374 656 aa15.09■□□□□ 0.01
GPC1-204ENST00000426280 SLC4A3P48751 1232 aa15.09■□□□□ 0.01
GPC1-204ENST00000426280 PTH1RQ03431 593 aa15.09■□□□□ 0.01
GPC1-204ENST00000426280 AKNAD1Q5T1N1 836 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms