RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SOCS4Q8WXH5 440 aa21.2■□□□□ 0.98
SBDSP1-202ENST00000423945 NDUFB10O96000 172 aa21.19■□□□□ 0.98
SBDSP1-202ENST00000423945 HMGCRP04035 888 aa21.19■□□□□ 0.98
SBDSP1-202ENST00000423945 XRCC5P13010 732 aaKnown RBP21.19■□□□□ 0.98
SBDSP1-202ENST00000423945 PTPREP23469 700 aa21.19■□□□□ 0.98
SBDSP1-202ENST00000423945 GJA8P48165 433 aa21.19■□□□□ 0.98
SBDSP1-202ENST00000423945 CWC27Q6UX04 472 aaKnown RBP21.19■□□□□ 0.98
SBDSP1-202ENST00000423945 NKX2-3Q8TAU0 364 aa21.19■□□□□ 0.98
SBDSP1-202ENST00000423945 SPATC1LQ9H0A9 340 aa21.19■□□□□ 0.98
SBDSP1-202ENST00000423945 IL25Q9H293 177 aa21.19■□□□□ 0.98
SBDSP1-202ENST00000423945 LAMA4Q16363 1823 aa21.19■□□□□ 0.98
SBDSP1-202ENST00000423945 ZNF236Q9UL36 1845 aa21.19■□□□□ 0.98
SBDSP1-202ENST00000423945 ORC4O43929 436 aa21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 RAD21O60216 631 aa21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 TMEM132BQ14DG7 1078 aa21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 CCL14Q16627 93 aa21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 SAMD1Q6SPF0 538 aaPredicted RBP21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 CCAR1Q8IX12 1150 aaKnown RBP21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 LRRC47Q8N1G4 583 aaKnown RBP21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 MB21D1Q8N884 522 aa21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 REPS2Q8NFH8 660 aa21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 PAK6Q9NQU5 681 aaPredicted RBP21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 IL17RBQ9NRM6 502 aa21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 PPP1R9AQ9ULJ8 1098 aa21.18■□□□□ 0.98
SBDSP1-202ENST00000423945 NMT2O60551 498 aa21.17■□□□□ 0.98
SBDSP1-202ENST00000423945 TTLL1O95922 423 aa21.17■□□□□ 0.98
SBDSP1-202ENST00000423945 MAP2K5Q13163 448 aa21.17■□□□□ 0.98
SBDSP1-202ENST00000423945 GRB14Q14449 540 aa21.17■□□□□ 0.98
SBDSP1-202ENST00000423945 MAP3K21Q5TCX8 1036 aa21.17■□□□□ 0.98
SBDSP1-202ENST00000423945 WDR78Q5VTH9 848 aa21.17■□□□□ 0.98
SBDSP1-202ENST00000423945 U2AF1L4Q8WU68 220 aaKnown RBP21.17■□□□□ 0.98
SBDSP1-202ENST00000423945 DIAPH3Q9NSV4 1193 aa21.17■□□□□ 0.98
SBDSP1-202ENST00000423945 ZNFX1Q9P2E3 1918 aaKnown RBP21.17■□□□□ 0.98
SBDSP1-202ENST00000423945 SLC15A5A6NIM6 579 aa21.16■□□□□ 0.98
SBDSP1-202ENST00000423945 VWA5AO00534 786 aa21.16■□□□□ 0.98
SBDSP1-202ENST00000423945 ERCC3P19447 782 aa21.16■□□□□ 0.98
SBDSP1-202ENST00000423945 RGS2P41220 211 aa21.16■□□□□ 0.98
SBDSP1-202ENST00000423945 NOVP48745 357 aa21.16■□□□□ 0.98
SBDSP1-202ENST00000423945 HAND2P61296 217 aa21.16■□□□□ 0.98
SBDSP1-202ENST00000423945 GMCL1P1Q8NEA9 526 aa21.16■□□□□ 0.98
SBDSP1-202ENST00000423945 SHCBP1Q8NEM2 672 aa21.16■□□□□ 0.98
SBDSP1-202ENST00000423945 APBA2Q99767 749 aa21.16■□□□□ 0.98
SBDSP1-202ENST00000423945 FLRT1Q9NZU1 646 aa21.16■□□□□ 0.98
SBDSP1-202ENST00000423945 SYNPO2Q9UMS6 1093 aa21.16■□□□□ 0.98
SBDSP1-202ENST00000423945 TSPY2A6NKD2 308 aa21.15■□□□□ 0.98
SBDSP1-202ENST00000423945 SGPL1O95470 568 aa21.15■□□□□ 0.98
SBDSP1-202ENST00000423945 UBE2Q1Q7Z7E8 422 aa21.15■□□□□ 0.98
SBDSP1-202ENST00000423945 TBC1D10CQ8IV04 446 aa21.15■□□□□ 0.98
SBDSP1-202ENST00000423945 NPLOC4Q8TAT6 608 aa21.15■□□□□ 0.98
SBDSP1-202ENST00000423945 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.15■□□□□ 0.98
SBDSP1-202ENST00000423945 ZNF214Q9UL59 606 aaPredicted RBP21.15■□□□□ 0.98
SBDSP1-202ENST00000423945 HIP1O00291 1037 aa21.14■□□□□ 0.97
SBDSP1-202ENST00000423945 IGHA2P01877 340 aa21.14■□□□□ 0.97
SBDSP1-202ENST00000423945 HOXC6P09630 235 aa21.14■□□□□ 0.97
SBDSP1-202ENST00000423945 PLS1Q14651 629 aa21.14■□□□□ 0.97
SBDSP1-202ENST00000423945 PRPF38BQ5VTL8 546 aaKnown RBP21.14■□□□□ 0.97
SBDSP1-202ENST00000423945 DEFB118Q96PH6 123 aa21.14■□□□□ 0.97
SBDSP1-202ENST00000423945 SLF1Q9BQI6 1058 aa21.14■□□□□ 0.97
SBDSP1-202ENST00000423945 CWC22Q9HCG8 908 aaKnown RBP21.14■□□□□ 0.97
SBDSP1-202ENST00000423945 RPTORQ8N122 1335 aa21.13■□□□□ 0.97
SBDSP1-202ENST00000423945 RANBP6O60518 1105 aaKnown RBP21.13■□□□□ 0.97
SBDSP1-202ENST00000423945 ZKSCAN1P17029 563 aaPredicted RBP21.13■□□□□ 0.97
SBDSP1-202ENST00000423945 MFAP1P55081 439 aaKnown RBP21.13■□□□□ 0.97
SBDSP1-202ENST00000423945 CACNB2Q08289 660 aaPredicted RBP21.13■□□□□ 0.97
SBDSP1-202ENST00000423945 SLFN13Q68D06 897 aa21.13■□□□□ 0.97
SBDSP1-202ENST00000423945 RASGRP2Q7LDG7 609 aa21.13■□□□□ 0.97
SBDSP1-202ENST00000423945 CRISPLD2Q9H0B8 497 aa21.13■□□□□ 0.97
SBDSP1-202ENST00000423945 IVNS1ABPQ9Y6Y0 642 aa21.13■□□□□ 0.97
SBDSP1-202ENST00000423945 PRKAR2AP13861 404 aaKnown RBP21.12■□□□□ 0.97
SBDSP1-202ENST00000423945 ADORA2AP29274 412 aa21.12■□□□□ 0.97
SBDSP1-202ENST00000423945 NCAPG2Q86XI2 1143 aa21.12■□□□□ 0.97
SBDSP1-202ENST00000423945 RIOX2Q8IUF8 465 aa21.12■□□□□ 0.97
SBDSP1-202ENST00000423945 TRMT44Q8IYL2 757 aaKnown RBP21.12■□□□□ 0.97
SBDSP1-202ENST00000423945 STAG1Q8WVM7 1258 aa21.12■□□□□ 0.97
SBDSP1-202ENST00000423945 MROH8Q9H579 483 aa21.12■□□□□ 0.97
SBDSP1-202ENST00000423945 STX8Q9UNK0 236 aa21.12■□□□□ 0.97
SBDSP1-202ENST00000423945 STRNO43815 780 aa21.11■□□□□ 0.97
SBDSP1-202ENST00000423945 COBLO75128 1261 aa21.11■□□□□ 0.97
SBDSP1-202ENST00000423945 RRP12Q5JTH9 1297 aaKnown RBP21.11■□□□□ 0.97
SBDSP1-202ENST00000423945 AKNAD1Q5T1N1 836 aa21.11■□□□□ 0.97
SBDSP1-202ENST00000423945 DSCC1Q9BVC3 393 aa21.11■□□□□ 0.97
SBDSP1-202ENST00000423945 HMX1Q9NP08 348 aaPredicted RBP21.11■□□□□ 0.97
SBDSP1-202ENST00000423945 FRMPD3Q5JV73 1810 aa21.11■□□□□ 0.97
SBDSP1-202ENST00000423945 NEDD4P46934 1319 aa21.1■□□□□ 0.97
SBDSP1-202ENST00000423945 PLXNA1Q9UIW2 1896 aa21.1■□□□□ 0.97
SBDSP1-202ENST00000423945 BMP3P12645 472 aa21.1■□□□□ 0.97
SBDSP1-202ENST00000423945 STAT3P40763 770 aa21.1■□□□□ 0.97
SBDSP1-202ENST00000423945 PRPF38AQ8NAV1 312 aaKnown RBP21.1■□□□□ 0.97
SBDSP1-202ENST00000423945 CHMP4CQ96CF2 233 aa21.1■□□□□ 0.97
SBDSP1-202ENST00000423945 GMCL1Q96IK5 515 aa21.1■□□□□ 0.97
SBDSP1-202ENST00000423945 TOMM22Q9NS69 142 aa21.1■□□□□ 0.97
SBDSP1-202ENST00000423945 TCP11L1Q9NUJ3 509 aa21.1■□□□□ 0.97
SBDSP1-202ENST00000423945 SLC25A27O95847 323 aa21.09■□□□□ 0.97
SBDSP1-202ENST00000423945 CHMLP26374 656 aa21.09■□□□□ 0.97
SBDSP1-202ENST00000423945 CCND3P30281 292 aaPredicted RBP21.09■□□□□ 0.97
SBDSP1-202ENST00000423945 RCSD1Q6JBY9 416 aa21.09■□□□□ 0.97
SBDSP1-202ENST00000423945 SKAP1Q86WV1 359 aa21.09■□□□□ 0.97
SBDSP1-202ENST00000423945 KIFC2Q96AC6 838 aa21.09■□□□□ 0.97
SBDSP1-202ENST00000423945 FEM1BQ9UK73 627 aa21.09■□□□□ 0.97
SBDSP1-202ENST00000423945 RIPK3Q9Y572 518 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms