RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 FBXO28Q9NVF7 368 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 FLRT1Q9NZU1 646 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 NYAP2Q9P242 653 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 STAP2Q9UGK3 403 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 ISY1Q9ULR0 285 aaKnown RBP11.07□□□□□ -0.64
NUP50-206ENST00000422489 CTDP1Q9Y5B0 961 aaPredicted RBP11.07□□□□□ -0.64
NUP50-206ENST00000422489 TSPY3P0CV98 308 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 TSPY8P0CW00 308 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 ADORA2AP29274 412 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 CYP2C19P33261 490 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 STAT3P40763 770 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 PPARAQ07869 468 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 GRB14Q14449 540 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 TMEM132BQ14DG7 1078 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 FAM47AQ5JRC9 791 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 CHRDL2Q6WN34 429 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 ANKLE1Q8NAG6 615 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 SHCBP1Q8NEM2 672 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 C11orf49Q9H6J7 331 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 INCENPQ9NQS7 918 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 SLC5A4Q9NY91 659 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 SUPT16HQ9Y5B9 1047 aaKnown RBP11.06□□□□□ -0.64
NUP50-206ENST00000422489 FOCADQ5VW36 1801 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 CDK5RAP2Q96SN8 1893 aa11.06□□□□□ -0.64
NUP50-206ENST00000422489 PTPRFP10586 1907 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 VWA5AO00534 786 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 SLC25A27O95847 323 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 IGHDP01880 384 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 FCER1AP12319 257 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 CTDSPL2Q05D32 466 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 AAMPQ13685 434 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 KIFC2Q96AC6 838 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 CEP95Q96GE4 821 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 MMP19Q99542 508 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 OGDHLQ9ULD0 1010 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 PPP1R9AQ9ULJ8 1098 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 SALL3Q9BXA9 1300 aa11.05□□□□□ -0.64
NUP50-206ENST00000422489 COBLO75128 1261 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 ZBED4O75132 1171 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 TTLL1O95922 423 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 NDUFB10O96000 172 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 HOXC6P09630 235 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 KCTD2Q14681 263 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 PRAMEF19Q5SWL8 479 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 VPS53Q5VIR6 699 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 SLFN13Q68D06 897 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 LHX8Q68G74 356 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 C7orf61Q8IZ16 206 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 CPXCR1Q8N123 301 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 LRRC47Q8N1G4 583 aaKnown RBP11.04□□□□□ -0.64
NUP50-206ENST00000422489 NEDD1Q8NHV4 660 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 FAM227BQ96M60 508 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 SLF1Q9BQI6 1058 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 HELLSQ9NRZ9 838 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 TOMM22Q9NS69 142 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 MTMR4Q9NYA4 1195 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 HTTP42858 3142 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
NUP50-206ENST00000422489 IGKV6D-41A0A0C4DH26 115 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 TSPY2A6NKD2 308 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 RANBP6O60518 1105 aaKnown RBP11.03□□□□□ -0.64
NUP50-206ENST00000422489 PGK2P07205 417 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
NUP50-206ENST00000422489 MCMDC2Q4G0Z9 681 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 ANO1Q5XXA6 986 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 CHD1LQ86WJ1 897 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 RIOX2Q8IUF8 465 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 PRPF38AQ8NAV1 312 aaKnown RBP11.03□□□□□ -0.64
NUP50-206ENST00000422489 TRPV1Q8NER1 839 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 MKL1Q969V6 931 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 DDX20Q9UHI6 824 aaKnown RBP11.03□□□□□ -0.64
NUP50-206ENST00000422489 ZMYND8Q9ULU4 1186 aaPredicted RBP11.03□□□□□ -0.64
NUP50-206ENST00000422489 ADAMTS5Q9UNA0 930 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 MTMR7Q9Y216 660 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 MGAMO43451 1857 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 ROBO3Q96MS0 1386 aa11.03□□□□□ -0.64
NUP50-206ENST00000422489 BMP3P12645 472 aa11.02□□□□□ -0.65
NUP50-206ENST00000422489 IKQ13123 557 aaPredicted RBP11.02□□□□□ -0.65
NUP50-206ENST00000422489 NMIQ13287 307 aaPredicted RBP11.02□□□□□ -0.65
NUP50-206ENST00000422489 RRP12Q5JTH9 1297 aaKnown RBP11.02□□□□□ -0.65
NUP50-206ENST00000422489 OLFML2BQ68BL8 750 aa11.02□□□□□ -0.65
NUP50-206ENST00000422489 SNRNP48Q6IEG0 339 aaKnown RBP11.02□□□□□ -0.65
NUP50-206ENST00000422489 SMC5Q8IY18 1101 aa11.02□□□□□ -0.65
NUP50-206ENST00000422489 ABRAQ8N0Z2 381 aa11.02□□□□□ -0.65
NUP50-206ENST00000422489 DDX11Q96FC9 970 aa11.02□□□□□ -0.65
NUP50-206ENST00000422489 SENP6Q9GZR1 1112 aaPredicted RBP11.02□□□□□ -0.65
NUP50-206ENST00000422489 RAVER2Q9HCJ3 691 aaKnown RBP11.02□□□□□ -0.65
NUP50-206ENST00000422489 RBM27Q9P2N5 1060 aaKnown RBP11.02□□□□□ -0.65
NUP50-206ENST00000422489 FEM1BQ9UK73 627 aa11.02□□□□□ -0.65
NUP50-206ENST00000422489 STX8Q9UNK0 236 aa11.02□□□□□ -0.65
NUP50-206ENST00000422489 RBBP6Q7Z6E9 1792 aaKnown RBP11.02□□□□□ -0.65
NUP50-206ENST00000422489 KIAA0100Q14667 2235 aaKnown RBP11.01□□□□□ -0.65
NUP50-206ENST00000422489 DDX60LQ5H9U9 1706 aaKnown RBP11.01□□□□□ -0.65
NUP50-206ENST00000422489 A0A0D9SFI3 127 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 TMEM232C9JQI7 657 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 FOXP2O15409 715 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 MSCO60682 206 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 FGAP02671 866 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 SYN1P17600 705 aa11.01□□□□□ -0.65
NUP50-206ENST00000422489 SDSP20132 328 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 837 ms