RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 ADORA2AP29274 412 aa30.4■■■□□ 2.46
SMDT1-202ENST00000422252 DPP9Q86TI2 863 aa30.4■■■□□ 2.46
SMDT1-202ENST00000422252 NCAPG2Q86XI2 1143 aa30.4■■■□□ 2.46
SMDT1-202ENST00000422252 RWDD1Q9H446 243 aaPredicted RBP30.4■■■□□ 2.46
SMDT1-202ENST00000422252 COLQQ9Y215 455 aaPredicted RBP30.4■■■□□ 2.46
SMDT1-202ENST00000422252 ZNF236Q9UL36 1845 aa30.39■■■□□ 2.46
SMDT1-202ENST00000422252 SLC3A2P08195 630 aaKnown RBP30.39■■■□□ 2.46
SMDT1-202ENST00000422252 MNX1P50219 401 aaPredicted RBP30.39■■■□□ 2.46
SMDT1-202ENST00000422252 PDE4BQ07343 736 aa30.39■■■□□ 2.46
SMDT1-202ENST00000422252 PPARAQ07869 468 aa30.39■■■□□ 2.46
SMDT1-202ENST00000422252 TMEM132BQ14DG7 1078 aa30.39■■■□□ 2.46
SMDT1-202ENST00000422252 CCDC129Q6ZRS4 1044 aa30.39■■■□□ 2.46
SMDT1-202ENST00000422252 NBPF3Q9H094 633 aa30.39■■■□□ 2.46
SMDT1-202ENST00000422252 PPP1R9AQ9ULJ8 1098 aa30.39■■■□□ 2.46
SMDT1-202ENST00000422252 EVI5O60447 810 aa30.38■■■□□ 2.45
SMDT1-202ENST00000422252 SMC5Q8IY18 1101 aa30.38■■■□□ 2.45
SMDT1-202ENST00000422252 LNPKQ9C0E8 428 aa30.38■■■□□ 2.45
SMDT1-202ENST00000422252 CLIP2Q9UDT6 1046 aa30.38■■■□□ 2.45
SMDT1-202ENST00000422252 F5H6K3 240 aa30.37■■■□□ 2.45
SMDT1-202ENST00000422252 VWA5AO00534 786 aa30.37■■■□□ 2.45
SMDT1-202ENST00000422252 SLC25A27O95847 323 aa30.37■■■□□ 2.45
SMDT1-202ENST00000422252 KLRC3Q07444 240 aa30.37■■■□□ 2.45
SMDT1-202ENST00000422252 LHX8Q68G74 356 aa30.37■■■□□ 2.45
SMDT1-202ENST00000422252 ABRAQ8N0Z2 381 aa30.37■■■□□ 2.45
SMDT1-202ENST00000422252 FOXP2O15409 715 aa30.36■■■□□ 2.45
SMDT1-202ENST00000422252 CEP95Q96GE4 821 aa30.36■■■□□ 2.45
SMDT1-202ENST00000422252 NUP88Q99567 741 aaPredicted RBP30.36■■■□□ 2.45
SMDT1-202ENST00000422252 C11orf49Q9H6J7 331 aa30.36■■■□□ 2.45
SMDT1-202ENST00000422252 SLC5A4Q9NY91 659 aa30.36■■■□□ 2.45
SMDT1-202ENST00000422252 MTMR4Q9NYA4 1195 aa30.36■■■□□ 2.45
SMDT1-202ENST00000422252 NDUFB10O96000 172 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 IGHA2P01877 340 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 TSPY3P0CV98 308 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 TSPY8P0CW00 308 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 CYP2C19P33261 490 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 OLFML2BQ68BL8 750 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 RIOX2Q8IUF8 465 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 NEDD1Q8NHV4 660 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 EXOC6Q8TAG9 804 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 MKL1Q969V6 931 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 HELLSQ9NRZ9 838 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 PLIN4Q96Q06 1357 aa30.35■■■□□ 2.45
SMDT1-202ENST00000422252 CEP290O15078 2479 aa30.34■■■□□ 2.45
SMDT1-202ENST00000422252 COBLO75128 1261 aa30.34■■■□□ 2.45
SMDT1-202ENST00000422252 TTLL1O95922 423 aa30.34■■■□□ 2.45
SMDT1-202ENST00000422252 B4GALNT3Q6L9W6 998 aa30.34■■■□□ 2.45
SMDT1-202ENST00000422252 CHRDL2Q6WN34 429 aa30.34■■■□□ 2.45
SMDT1-202ENST00000422252 TICAM2Q86XR7 235 aa30.34■■■□□ 2.45
SMDT1-202ENST00000422252 SLF1Q9BQI6 1058 aa30.34■■■□□ 2.45
SMDT1-202ENST00000422252 SYNPO2Q9UMS6 1093 aa30.34■■■□□ 2.45
SMDT1-202ENST00000422252 COL11A1P12107 1806 aaPredicted RBP30.33■■■□□ 2.45
SMDT1-202ENST00000422252 FCER1AP12319 257 aa30.33■■■□□ 2.45
SMDT1-202ENST00000422252 STAT3P40763 770 aa30.33■■■□□ 2.45
SMDT1-202ENST00000422252 FAM47AQ5JRC9 791 aa30.33■■■□□ 2.45
SMDT1-202ENST00000422252 REPS2Q8NFH8 660 aa30.33■■■□□ 2.45
SMDT1-202ENST00000422252 MYH4Q9Y623 1939 aa30.32■■■□□ 2.44
SMDT1-202ENST00000422252 IGHDP01880 384 aa30.32■■■□□ 2.44
SMDT1-202ENST00000422252 CNGA1P29973 690 aa30.32■■■□□ 2.44
SMDT1-202ENST00000422252 TFAP4Q01664 338 aa30.32■■■□□ 2.44
SMDT1-202ENST00000422252 ZNF214Q9UL59 606 aaPredicted RBP30.32■■■□□ 2.44
SMDT1-202ENST00000422252 CYBAP13498 195 aa30.31■■■□□ 2.44
SMDT1-202ENST00000422252 COPB2P35606 906 aa30.31■■■□□ 2.44
SMDT1-202ENST00000422252 VPS53Q5VIR6 699 aa30.31■■■□□ 2.44
SMDT1-202ENST00000422252 CHD1LQ86WJ1 897 aa30.31■■■□□ 2.44
SMDT1-202ENST00000422252 DDX20Q9UHI6 824 aaKnown RBP30.31■■■□□ 2.44
SMDT1-202ENST00000422252 ALPK3Q96L96 1907 aa30.3■■■□□ 2.44
SMDT1-202ENST00000422252 TRIM6-TRIM34B2RNG4 842 aa30.3■■■□□ 2.44
SMDT1-202ENST00000422252 MSCO60682 206 aa30.3■■■□□ 2.44
SMDT1-202ENST00000422252 CTDSPL2Q05D32 466 aa30.3■■■□□ 2.44
SMDT1-202ENST00000422252 LRRC47Q8N1G4 583 aaKnown RBP30.3■■■□□ 2.44
SMDT1-202ENST00000422252 PRPF38AQ8NAV1 312 aaKnown RBP30.3■■■□□ 2.44
SMDT1-202ENST00000422252 GMCL1P1Q8NEA9 526 aa30.3■■■□□ 2.44
SMDT1-202ENST00000422252 TRPV1Q8NER1 839 aa30.3■■■□□ 2.44
SMDT1-202ENST00000422252 FAM227BQ96M60 508 aa30.3■■■□□ 2.44
SMDT1-202ENST00000422252 MMP19Q99542 508 aa30.3■■■□□ 2.44
SMDT1-202ENST00000422252 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.3■■■□□ 2.44
SMDT1-202ENST00000422252 PFASO15067 1338 aa30.29■■■□□ 2.44
SMDT1-202ENST00000422252 A0A0D9SFI3 127 aa30.29■■■□□ 2.44
SMDT1-202ENST00000422252 NUCB1Q02818 461 aa30.29■■■□□ 2.44
SMDT1-202ENST00000422252 ALX1Q15699 326 aa30.29■■■□□ 2.44
SMDT1-202ENST00000422252 MCMDC2Q4G0Z9 681 aa30.29■■■□□ 2.44
SMDT1-202ENST00000422252 ANAPC4Q9UJX5 808 aa30.29■■■□□ 2.44
SMDT1-202ENST00000422252 COL6A1P12109 1028 aa30.28■■■□□ 2.44
SMDT1-202ENST00000422252 MAML3Q96JK9 1138 aa30.28■■■□□ 2.44
SMDT1-202ENST00000422252 KCTD2Q14681 263 aa30.27■■■□□ 2.44
SMDT1-202ENST00000422252 PPP4R3BQ5MIZ7 849 aa30.27■■■□□ 2.44
SMDT1-202ENST00000422252 C7orf61Q8IZ16 206 aa30.27■■■□□ 2.44
SMDT1-202ENST00000422252 RILPL2Q969X0 211 aa30.27■■■□□ 2.44
SMDT1-202ENST00000422252 TEX13BQ9BXU2 312 aa30.27■■■□□ 2.44
SMDT1-202ENST00000422252 RBM27Q9P2N5 1060 aaKnown RBP30.27■■■□□ 2.44
SMDT1-202ENST00000422252 FEM1BQ9UK73 627 aa30.27■■■□□ 2.44
SMDT1-202ENST00000422252 FRMPD3Q5JV73 1810 aa30.26■■■□□ 2.44
SMDT1-202ENST00000422252 TSPY2A6NKD2 308 aa30.26■■■□□ 2.43
SMDT1-202ENST00000422252 FXR1P51114 621 aaKnown RBP eCLIP30.26■■■□□ 2.43
SMDT1-202ENST00000422252 NMIQ13287 307 aaPredicted RBP30.26■■■□□ 2.43
SMDT1-202ENST00000422252 SLFN13Q68D06 897 aa30.26■■■□□ 2.43
SMDT1-202ENST00000422252 SNRNP48Q6IEG0 339 aaKnown RBP30.26■■■□□ 2.43
SMDT1-202ENST00000422252 PLEKHM2Q8IWE5 1019 aa30.26■■■□□ 2.43
SMDT1-202ENST00000422252 OSBPL3Q9H4L5 887 aa30.26■■■□□ 2.43
SMDT1-202ENST00000422252 INCENPQ9NQS7 918 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 243.5 ms