RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 TRIM22Q8IYM9 498 aa19.6■□□□□ 0.73
PMS1-206ENST00000418224 RUFY1Q96T51 708 aa19.6■□□□□ 0.73
PMS1-206ENST00000418224 VPS16Q9H269 839 aa19.6■□□□□ 0.73
PMS1-206ENST00000418224 MYO1AQ9UBC5 1043 aa19.6■□□□□ 0.73
PMS1-206ENST00000418224 PCDHB6Q9Y5E3 794 aa19.6■□□□□ 0.73
PMS1-206ENST00000418224 TMEM94Q12767 1356 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 C4AP0C0L4 1744 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 C4BP0C0L5 1744 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 FSBPO95073 299 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 ATF3P18847 181 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 PHKA1P46020 1223 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 TTF1Q15361 905 aaPredicted RBP19.59■□□□□ 0.73
PMS1-206ENST00000418224 CEP85LQ5SZL2 805 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 CYP26C1Q6V0L0 522 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 KIF6Q6ZMV9 814 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 EGFL6Q8IUX8 553 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 HELBQ8NG08 1087 aaPredicted RBP19.59■□□□□ 0.73
PMS1-206ENST00000418224 NUP133Q8WUM0 1156 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 ABHD10Q9NUJ1 306 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 FBXO3Q9UK99 471 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 TJP1Q07157 1748 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 KRT9P35527 623 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 MATR3P43243 847 aaKnown RBP eCLIP19.59■□□□□ 0.73
PMS1-206ENST00000418224 AMOTL1Q8IY63 956 aa19.59■□□□□ 0.73
PMS1-206ENST00000418224 FBXO2Q9UK22 296 aaPredicted RBP19.59■□□□□ 0.73
PMS1-206ENST00000418224 N4BP3O15049 544 aa19.58■□□□□ 0.73
PMS1-206ENST00000418224 MMP1P03956 469 aa19.58■□□□□ 0.73
PMS1-206ENST00000418224 EZH2Q15910 746 aaKnown RBP19.58■□□□□ 0.73
PMS1-206ENST00000418224 PREPLQ4J6C6 727 aaPredicted RBP19.58■□□□□ 0.73
PMS1-206ENST00000418224 JAKMIP2Q96AA8 810 aa19.58■□□□□ 0.73
PMS1-206ENST00000418224 SH3GL2Q99962 352 aa19.58■□□□□ 0.73
PMS1-206ENST00000418224 FMNL1O95466 1100 aaPredicted RBP19.58■□□□□ 0.72
PMS1-206ENST00000418224 PCCAP05165 728 aaPredicted RBP19.58■□□□□ 0.72
PMS1-206ENST00000418224 CCDC40Q4G0X9 1142 aa19.58■□□□□ 0.72
PMS1-206ENST00000418224 CCDC122Q5T0U0 273 aa19.58■□□□□ 0.72
PMS1-206ENST00000418224 WASF1Q92558 559 aa19.58■□□□□ 0.72
PMS1-206ENST00000418224 FAXDC2Q96IV6 333 aa19.58■□□□□ 0.72
PMS1-206ENST00000418224 RIPOR2Q9Y4F9 1068 aa19.58■□□□□ 0.72
PMS1-206ENST00000418224 EPN1Q9Y6I3 576 aaPredicted RBP19.58■□□□□ 0.72
PMS1-206ENST00000418224 PDE2AO00408 941 aaPredicted RBP19.57■□□□□ 0.72
PMS1-206ENST00000418224 CD44P16070 742 aaKnown RBP19.57■□□□□ 0.72
PMS1-206ENST00000418224 PTPREP23469 700 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 PBX1P40424 430 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 CDR1P51861 262 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 IFT88Q13099 833 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 SPATA1Q5VX52 437 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 HDAC7Q8WUI4 952 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 SYNRGQ9UMZ2 1314 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 TARSL2A2RTX5 802 aaKnown RBP19.57■□□□□ 0.72
PMS1-206ENST00000418224 GOLGA8KD6RF30 607 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 MBD4O95243 580 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 E2F5Q15329 346 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 UBE3CQ15386 1083 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 RTN1Q16799 776 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 SGMS1Q86VZ5 419 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 STRBPQ96SI9 672 aaKnown RBP19.57■□□□□ 0.72
PMS1-206ENST00000418224 JADE2Q9NQC1 790 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 FAM184BQ9ULE4 1060 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 PCDH11XQ9BZA7 1347 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 PCDH11YQ9BZA8 1340 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 SARSP49591 514 aaKnown RBP19.57■□□□□ 0.72
PMS1-206ENST00000418224 SLC7A5Q01650 507 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 SF3B2Q13435 895 aaKnown RBP19.57■□□□□ 0.72
PMS1-206ENST00000418224 ZBTB38Q8NAP3 1195 aaPredicted RBP19.57■□□□□ 0.72
PMS1-206ENST00000418224 SGSM3Q96HU1 749 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 SCLT1Q96NL6 688 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 ARMT1Q9H993 441 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 CABP5Q9NP86 173 aa19.57■□□□□ 0.72
PMS1-206ENST00000418224 OPA1O60313 960 aa19.56■□□□□ 0.72
PMS1-206ENST00000418224 PDHBP11177 359 aa19.56■□□□□ 0.72
PMS1-206ENST00000418224 GCFC2P16383 781 aaKnown RBP19.56■□□□□ 0.72
PMS1-206ENST00000418224 CLNS1AP54105 237 aaKnown RBP19.56■□□□□ 0.72
PMS1-206ENST00000418224 GUCY1A3Q02108 690 aa19.56■□□□□ 0.72
PMS1-206ENST00000418224 TTMPQ5BVD1 217 aa19.56■□□□□ 0.72
PMS1-206ENST00000418224 RILPL1Q5EBL4 403 aa19.56■□□□□ 0.72
PMS1-206ENST00000418224 REXO2Q9Y3B8 237 aaKnown RBP19.56■□□□□ 0.72
PMS1-206ENST00000418224 ANKRD18BA2A2Z9 1011 aa19.56■□□□□ 0.72
PMS1-206ENST00000418224 BIRC2Q13490 618 aa19.56■□□□□ 0.72
PMS1-206ENST00000418224 IFNL3Q8IZI9 196 aa19.56■□□□□ 0.72
PMS1-206ENST00000418224 MAGEB6Q8N7X4 407 aa19.56■□□□□ 0.72
PMS1-206ENST00000418224 OXER1Q8TDS5 423 aa19.56■□□□□ 0.72
PMS1-206ENST00000418224 CSRNP2Q9H175 543 aa19.56■□□□□ 0.72
PMS1-206ENST00000418224 RIC1Q4ADV7 1423 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 ABCC12Q96J65 1359 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 NDUFA10O95299 355 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 IFNAR1P17181 557 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 ERCC5P28715 1186 aaPredicted RBP19.55■□□□□ 0.72
PMS1-206ENST00000418224 SEC24CP53992 1094 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 MFSD6Q6ZSS7 791 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 TTLL11Q8NHH1 800 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 CCDC51Q96ER9 411 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 EPB41L4AQ9HCS5 686 aaPredicted RBP19.55■□□□□ 0.72
PMS1-206ENST00000418224 LAMB4A4D0S4 1761 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 ERVV-2B6SEH9 535 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 CSF1RP07333 972 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 CKAP4Q07065 602 aaKnown RBP19.55■□□□□ 0.72
PMS1-206ENST00000418224 CCDC13Q8IYE1 715 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 RNF217Q8TC41 542 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 GLI3P10071 1580 aa19.55■□□□□ 0.72
PMS1-206ENST00000418224 SKAP2O75563 359 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms