RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 ZYXQ15942 572 aaKnown RBP16.9■□□□□ 0.3
SGCE-202ENST00000415788 SYNE3Q6ZMZ3 975 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 GMCL1Q96IK5 515 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 SLC12A7Q9Y666 1083 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 PHIPQ8WWQ0 1821 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 TESPA1A2RU30 521 aaPredicted RBP16.9■□□□□ 0.3
SGCE-202ENST00000415788 ST18O60284 1047 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 DDAH1O94760 285 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 NDUFB10O96000 172 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 CALM1P0DP23 149 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 CALM2P0DP24 149 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 CALM3P0DP25 149 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 RCAN1P53805 252 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 SREBF2Q12772 1141 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 HS1BP3Q53T59 392 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 SLFN13Q68D06 897 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 ZSCAN30Q86W11 494 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 BRF1Q92994 677 aa16.9■□□□□ 0.3
SGCE-202ENST00000415788 GPHNQ9NQX3 736 aaPredicted RBP16.9■□□□□ 0.3
SGCE-202ENST00000415788 CCL15-CCL14A0A0B4J2E2 113 aa16.89■□□□□ 0.29
SGCE-202ENST00000415788 WDR46O15213 610 aaKnown RBP16.89■□□□□ 0.29
SGCE-202ENST00000415788 NASPP49321 788 aaPredicted RBP16.89■□□□□ 0.29
SGCE-202ENST00000415788 EVCP57679 992 aa16.89■□□□□ 0.29
SGCE-202ENST00000415788 TOB2Q14106 344 aaPredicted RBP16.89■□□□□ 0.29
SGCE-202ENST00000415788 CCL15Q16663 113 aa16.89■□□□□ 0.29
SGCE-202ENST00000415788 ZNF654Q8IZM8 581 aa16.89■□□□□ 0.29
SGCE-202ENST00000415788 DCAF4Q8WV16 495 aa16.89■□□□□ 0.29
SGCE-202ENST00000415788 PKNOX2Q96KN3 472 aa16.89■□□□□ 0.29
SGCE-202ENST00000415788 MAP3K14Q99558 947 aa16.89■□□□□ 0.29
SGCE-202ENST00000415788 WDR33Q9C0J8 1336 aaKnown RBP16.89■□□□□ 0.29
SGCE-202ENST00000415788 RAD21O60216 631 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 SNHG28P0DPA3 235 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 PDHBP11177 359 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 VCAM1P19320 739 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 MAP2K2P36507 400 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 SLC1A4P43007 532 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 GRM1Q13255 1194 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 PABPC4Q13310 644 aaKnown RBP eCLIP16.88■□□□□ 0.29
SGCE-202ENST00000415788 GADL1Q6ZQY3 521 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 SENP2Q9HC62 589 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 AGTPBP1Q9UPW5 1226 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 SLC45A1Q9Y2W3 748 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 HTRA3P83110 453 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 TROAPQ12815 778 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 GPATCH4Q5T3I0 446 aaKnown RBP16.88■□□□□ 0.29
SGCE-202ENST00000415788 APOA5Q6Q788 366 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 SPICE1Q8N0Z3 855 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 BRI3BPQ8WY22 251 aa16.88■□□□□ 0.29
SGCE-202ENST00000415788 KLF18A0A0U1RQI7 1052 aa16.87■□□□□ 0.29
SGCE-202ENST00000415788 BMP3P12645 472 aa16.87■□□□□ 0.29
SGCE-202ENST00000415788 VEGFBP49765 207 aa16.87■□□□□ 0.29
SGCE-202ENST00000415788 AK2P54819 239 aa16.87■□□□□ 0.29
SGCE-202ENST00000415788 ZNF445P59923 1031 aa16.87■□□□□ 0.29
SGCE-202ENST00000415788 NUCB2P80303 420 aa16.87■□□□□ 0.29
SGCE-202ENST00000415788 MOGSQ13724 837 aa16.87■□□□□ 0.29
SGCE-202ENST00000415788 OTUD7BQ6GQQ9 843 aa16.87■□□□□ 0.29
SGCE-202ENST00000415788 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.87■□□□□ 0.29
SGCE-202ENST00000415788 ANKRD23Q86SG2 305 aa16.87■□□□□ 0.29
SGCE-202ENST00000415788 PDCL3Q9H2J4 239 aa16.87■□□□□ 0.29
SGCE-202ENST00000415788 ZCCHC17Q9NP64 241 aaKnown RBP16.87■□□□□ 0.29
SGCE-202ENST00000415788 ZBTB43O43298 467 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 HOXA7P31268 230 aaPredicted RBP16.86■□□□□ 0.29
SGCE-202ENST00000415788 KIF5BP33176 963 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 KIF23Q02241 960 aaPredicted RBP16.86■□□□□ 0.29
SGCE-202ENST00000415788 APOBRQ0VD83 1088 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 PPP2R5BQ15173 497 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 ASPRV1Q53RT3 343 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 KIAA1755Q5JYT7 1200 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 CTCFLQ8NI51 663 aaPredicted RBP16.86■□□□□ 0.29
SGCE-202ENST00000415788 ZNF274Q96GC6 653 aaPredicted RBP16.86■□□□□ 0.29
SGCE-202ENST00000415788 USP17L15C9J2P7 530 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 USP17L13C9JLJ4 530 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 USP17L11C9JVI0 530 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 USP17L18D6R9N7 530 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 USP17L22D6RA61 530 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 USP17L17D6RBQ6 530 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 USP17L19D6RCP7 530 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 USP17L20D6RJB6 530 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 OFD1O75665 1012 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 BAG4O95429 457 aaKnown RBP16.86■□□□□ 0.29
SGCE-202ENST00000415788 PARP1P09874 1014 aaKnown RBP16.86■□□□□ 0.29
SGCE-202ENST00000415788 TM4SF4P48230 202 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 MCM2P49736 904 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 ZNF543Q08ER8 600 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 USP17L24Q0WX57 530 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 DGKZQ13574 1117 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 CCDC96Q2M329 555 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 NUP133Q8WUM0 1156 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 RPAP3Q9H6T3 665 aaPredicted RBP16.86■□□□□ 0.29
SGCE-202ENST00000415788 MTMR7Q9Y216 660 aa16.86■□□□□ 0.29
SGCE-202ENST00000415788 MYH4Q9Y623 1939 aa16.85■□□□□ 0.29
SGCE-202ENST00000415788 BTBD19C9JJ37 291 aa16.85■□□□□ 0.29
SGCE-202ENST00000415788 MSNP26038 577 aaKnown RBP16.85■□□□□ 0.29
SGCE-202ENST00000415788 GRM4Q14833 912 aa16.85■□□□□ 0.29
SGCE-202ENST00000415788 FAM83BQ5T0W9 1011 aa16.85■□□□□ 0.29
SGCE-202ENST00000415788 MICU3Q86XE3 530 aa16.85■□□□□ 0.29
SGCE-202ENST00000415788 TANGO6Q9C0B7 1094 aa16.85■□□□□ 0.29
SGCE-202ENST00000415788 FEM1BQ9UK73 627 aa16.85■□□□□ 0.29
SGCE-202ENST00000415788 PNMA3Q9UL41 463 aa16.85■□□□□ 0.29
SGCE-202ENST00000415788 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms