RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 GIPRP48546 466 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 PMS1P54277 932 aaKnown RBP6□□□□□ -1.45
HMGB3P23-201ENST00000414981 TEKQ02763 1124 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 AUHQ13825 339 aaKnown RBP6□□□□□ -1.45
HMGB3P23-201ENST00000414981 FYB2Q5VWT5 728 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 LINC00116Q8NCU8 138 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 PDZD8Q8NEN9 1154 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 OR6P1Q8NGX9 317 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 SMARCC1Q92922 1105 aaPredicted RBP6□□□□□ -1.45
HMGB3P23-201ENST00000414981 TCTN2Q96GX1 697 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 PRDM14Q9GZV8 571 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 ZNF503-AS2A6NEH8 195 aa5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 ZGLP1P0C6A0 271 aa5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 EIF6P56537 245 aaKnown RBP5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 UNC5AQ6ZN44 842 aa5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 TMC3Q7Z5M5 1100 aa5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 SPPL2CQ8IUH8 684 aa5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 C7orf61Q8IZ16 206 aa5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 OXR1Q8N573 874 aa5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 ZNF512BQ96KM6 892 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 MKRN2Q9H000 416 aaKnown RBP5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 PCDHB12Q9Y5F1 795 aa5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 SLC12A7Q9Y666 1083 aa5.99□□□□□ -1.45
HMGB3P23-201ENST00000414981 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 PRAMEF1O95521 474 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 HK2P52789 917 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 PCBP3P57721 371 aaKnown RBP5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 DUSP4Q13115 394 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 SNW1Q13573 536 aaKnown RBP5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 NR0B2Q15466 257 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 BBS9Q3SYG4 887 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 OGFOD2Q6N063 350 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 LSRQ86X29 649 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 LILRA2Q8N149 483 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 C19orf47Q8N9M1 422 aaKnown RBP5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 ABHD4Q8TB40 342 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 LINC01599Q8WXQ3 324 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 MYLIPQ8WY64 445 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 SRRTQ9BXP5 876 aaKnown RBP5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 ACBD3Q9H3P7 528 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 SP110Q9HB58 689 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 GOLGA2P5Q9HBQ8 144 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 CHST7Q9NS84 486 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 FBXL21Q9UKT6 434 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 INPP5FQ9Y2H2 1132 aa5.98□□□□□ -1.45
HMGB3P23-201ENST00000414981 SSU72P8A0A1W2PR75 194 aa5.97□□□□□ -1.45
HMGB3P23-201ENST00000414981 FITM1A5D6W6 292 aa5.97□□□□□ -1.45
HMGB3P23-201ENST00000414981 CHRNEQ04844 493 aa5.97□□□□□ -1.45
HMGB3P23-201ENST00000414981 RUFY4Q6ZNE9 571 aa5.97□□□□□ -1.45
HMGB3P23-201ENST00000414981 CCDC144CPQ8IYA2 1237 aa5.97□□□□□ -1.45
HMGB3P23-201ENST00000414981 CCSER2Q9H7U1 834 aa5.97□□□□□ -1.45
HMGB3P23-201ENST00000414981 ZNF214Q9UL59 606 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P23-201ENST00000414981 STRIP2Q9ULQ0 834 aa5.97□□□□□ -1.45
HMGB3P23-201ENST00000414981 TTBK1Q5TCY1 1321 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P23-201ENST00000414981 C9IYK1 514 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 FARP2O94887 1054 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 TCF3P15923 654 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 ENDOUP21128 410 aaKnown RBP5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 NASPP49321 788 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 CASP7P55210 303 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 ERVFC1P60507 584 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 SNX17Q15036 470 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 ZYXQ15942 572 aaKnown RBP5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 CCDC81Q6ZN84 652 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 VPS37DQ86XT2 251 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 ANKS4BQ8N8V4 417 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 CPLX3Q8WVH0 158 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 SHDQ96IW2 340 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 KRTAP4-12Q9BQ66 201 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 TCFL5Q9UL49 500 aa5.96□□□□□ -1.46
HMGB3P23-201ENST00000414981 A0A087WZG4 1122 aa5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 KRTAP9-6A0A140TA67 174 aa5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 LRRC10BA6NIK2 292 aa5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 ATF4P18848 351 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 RPL10P27635 214 aaKnown RBP5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 ERCC5P28715 1186 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 BMP8BP34820 402 aa5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 G6PC3Q9BUM1 346 aa5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 FOXP3Q9BZS1 431 aa5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 GFOD1Q9NXC2 390 aa5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 EBF1Q9UH73 591 aa5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 LTBP3Q9NS15 1303 aa5.95□□□□□ -1.46
HMGB3P23-201ENST00000414981 A0A1W2PQH9 124 aa5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 TMEM82A0PJX8 343 aa5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 FAM86C2PA6NEL3 165 aa5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 SHOXO15266 292 aa5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 GSNP06396 782 aa5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 SYPP08247 313 aa5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 VAV1P15498 845 aa5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 CD247P20963 164 aa5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 KIR2DL1P43626 348 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 KIR2DL2P43627 348 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 RANGAP1P46060 587 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 TCEAL1Q15170 157 aa5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 AXDND1Q5T1B0 1012 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 PPFIBP1Q86W92 1011 aa5.94□□□□□ -1.46
HMGB3P23-201ENST00000414981 ZNF428Q96B54 188 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms