RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 STRNO43815 780 aa13.27□□□□□ -0.29
RFFL-204ENST00000414419 GJB1P08034 283 aa13.27□□□□□ -0.29
RFFL-204ENST00000414419 XRCC5P13010 732 aaKnown RBP13.27□□□□□ -0.29
RFFL-204ENST00000414419 RRP12Q5JTH9 1297 aaKnown RBP13.27□□□□□ -0.29
RFFL-204ENST00000414419 MKL1Q969V6 931 aa13.27□□□□□ -0.29
RFFL-204ENST00000414419 UNC93B1Q9H1C4 597 aa13.27□□□□□ -0.29
RFFL-204ENST00000414419 ISY1Q9ULR0 285 aaKnown RBP13.27□□□□□ -0.29
RFFL-204ENST00000414419 STX8Q9UNK0 236 aa13.27□□□□□ -0.29
RFFL-204ENST00000414419 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.29
RFFL-204ENST00000414419 ZMYM6O95789 1325 aa13.27□□□□□ -0.29
RFFL-204ENST00000414419 PLIN4Q96Q06 1357 aa13.27□□□□□ -0.29
RFFL-204ENST00000414419 A0A0G2JMZ2 1700 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 SLC15A5A6NIM6 579 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 ZNF213O14771 459 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 TNRC18O15417 2968 aaPredicted RBP13.26□□□□□ -0.29
RFFL-204ENST00000414419 ORC4O43929 436 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 NDUFB10O96000 172 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 ZKSCAN1P17029 563 aaPredicted RBP13.26□□□□□ -0.29
RFFL-204ENST00000414419 PTPREP23469 700 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 GJA8P48165 433 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 HAND2P61296 217 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 MAP2K5Q13163 448 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 MORN1Q5T089 497 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 MFSD6Q6ZSS7 791 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 NCAPG2Q86XI2 1143 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 LRRC47Q8N1G4 583 aaKnown RBP13.26□□□□□ -0.29
RFFL-204ENST00000414419 SHCBP1Q8NEM2 672 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 NUP88Q99567 741 aaPredicted RBP13.26□□□□□ -0.29
RFFL-204ENST00000414419 APBA2Q99767 749 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 SLF1Q9BQI6 1058 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 MOV10L1Q9BXT6 1211 aaKnown RBP13.26□□□□□ -0.29
RFFL-204ENST00000414419 RNF41Q9H4P4 317 aaPredicted RBP13.26□□□□□ -0.29
RFFL-204ENST00000414419 MROH8Q9H579 483 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 HMX1Q9NP08 348 aaPredicted RBP13.26□□□□□ -0.29
RFFL-204ENST00000414419 INCENPQ9NQS7 918 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 FBXO28Q9NVF7 368 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 PPP1R9AQ9ULJ8 1098 aa13.26□□□□□ -0.29
RFFL-204ENST00000414419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.26□□□□□ -0.29
RFFL-204ENST00000414419 RPTORQ8N122 1335 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 SLC25A27O95847 323 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 TFRCP02786 760 aaKnown RBP13.25□□□□□ -0.29
RFFL-204ENST00000414419 PCP11498 1178 aaKnown RBP13.25□□□□□ -0.29
RFFL-204ENST00000414419 CAPN2P17655 700 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 ERCC3P19447 782 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 AKNAD1Q5T1N1 836 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 SLFN13Q68D06 897 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 DPP9Q86TI2 863 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 PRPF38AQ8NAV1 312 aaKnown RBP13.25□□□□□ -0.29
RFFL-204ENST00000414419 GMCL1P1Q8NEA9 526 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 RUFY2Q8WXA3 655 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 TRIB2Q92519 343 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 DEFB118Q96PH6 123 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 SLC5A4Q9NY91 659 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 CTNNA3Q9UI47 895 aa13.25□□□□□ -0.29
RFFL-204ENST00000414419 VWA5AO00534 786 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 ZBED4O75132 1171 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 SGPL1O95470 568 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 FGRP09769 529 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 BMP3P12645 472 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 GSPT1P15170 499 aaKnown RBP13.24□□□□□ -0.29
RFFL-204ENST00000414419 COPB2P35606 906 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 STAT3P40763 770 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 IKQ13123 557 aaPredicted RBP13.24□□□□□ -0.29
RFFL-204ENST00000414419 GRB14Q14449 540 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 TMEM132BQ14DG7 1078 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 U2AF1L4Q8WU68 220 aaKnown RBP13.24□□□□□ -0.29
RFFL-204ENST00000414419 USP6NLQ92738 828 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 DSCC1Q9BVC3 393 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.24□□□□□ -0.29
RFFL-204ENST00000414419 FEM1BQ9UK73 627 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 ADAMTS5Q9UNA0 930 aa13.24□□□□□ -0.29
RFFL-204ENST00000414419 LAMA4Q16363 1823 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 NMT2O60551 498 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 FCER1AP12319 257 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 PRKAR2AP13861 404 aaKnown RBP13.23□□□□□ -0.29
RFFL-204ENST00000414419 ADORA2AP29274 412 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 SLC1A4P43007 532 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 CCL14Q16627 93 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 IMMTQ16891 758 aaKnown RBP13.23□□□□□ -0.29
RFFL-204ENST00000414419 MFSD14CQ5VZR4 134 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 RIOX2Q8IUF8 465 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 ESR2Q92731 530 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 PAK6Q9NQU5 681 aaPredicted RBP13.23□□□□□ -0.29
RFFL-204ENST00000414419 IL17RBQ9NRM6 502 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 MTMR7Q9Y216 660 aa13.23□□□□□ -0.29
RFFL-204ENST00000414419 BRCA2P51587 3418 aa13.22□□□□□ -0.29
RFFL-204ENST00000414419 RAD50Q92878 1312 aa13.22□□□□□ -0.29
RFFL-204ENST00000414419 TMEM232C9JQI7 657 aa13.22□□□□□ -0.29
RFFL-204ENST00000414419 MCCP23508 829 aa13.22□□□□□ -0.29
RFFL-204ENST00000414419 SLC4A3P48751 1232 aa13.22□□□□□ -0.29
RFFL-204ENST00000414419 TRIM32Q13049 653 aa13.22□□□□□ -0.29
RFFL-204ENST00000414419 CENPQQ7L2Z9 268 aaPredicted RBP13.22□□□□□ -0.29
RFFL-204ENST00000414419 ABRAQ8N0Z2 381 aa13.22□□□□□ -0.29
RFFL-204ENST00000414419 CPXCR1Q8N123 301 aa13.22□□□□□ -0.29
RFFL-204ENST00000414419 STAG1Q8WVM7 1258 aa13.22□□□□□ -0.29
RFFL-204ENST00000414419 CHMP4CQ96CF2 233 aa13.22□□□□□ -0.29
RFFL-204ENST00000414419 TEX13BQ9BXU2 312 aa13.22□□□□□ -0.29
RFFL-204ENST00000414419 TCP11L1Q9NUJ3 509 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms