RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SMIM22K7EJ46 135 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 ARVCFO00192 962 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 SRGAP3O43295 1099 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 TLL1O43897 1013 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 DUSP11O75319 330 aaKnown RBP2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 FLOT1O75955 427 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 PGK2P07205 417 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 ASGR1P07306 291 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 C6orf222P0C671 652 aaPredicted RBP2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZNF865P0CJ78 1059 aaPredicted RBP2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 TAL1P17542 331 aaPredicted RBP2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 CST5P28325 142 aaPredicted RBP2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 COPB2P35606 906 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 MCAMP43121 646 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 USP5P45974 858 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 MRE11P49959 708 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 G3BP1Q13283 466 aaKnown RBP eCLIP2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 KCNA10Q16322 511 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZNF792Q3KQV3 632 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 CCDC184Q52MB2 194 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 TMEM67Q5HYA8 995 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 GNASQ5JWF2 1037 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 CCDC158Q5M9N0 1113 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 DNAH12Q6ZR08 3092 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 OTOP2Q7RTS6 562 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 FAM126BQ8IXS8 530 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 RPUSD2Q8IZ73 545 aaKnown RBP2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 GJD3Q8N144 294 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 MSL3Q8N5Y2 521 aaKnown RBP2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 KLHDC9Q8NEP7 349 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 SSH1Q8WYL5 1049 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 HLA-CQ95604 372 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 ATG4CQ96DT6 458 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 DDX11Q96FC9 970 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 CDCA7LQ96GN5 454 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 UIMC1Q96RL1 719 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 MMP19Q99542 508 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 SEZ6LQ9BYH1 1024 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 SH2D4AQ9H788 454 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 MRS2Q9HD23 443 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 IL23AQ9NPF7 189 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 SNRKQ9NRH2 765 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 YBX2Q9Y2T7 364 aaKnown RBP2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 PCDHA11Q9Y5I1 949 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 MTCH2Q9Y6C9 303 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 SLC4A7Q9Y6M7 1214 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 FAM186AA6NE01 2351 aa2.89□□□□□ -1.95
RNU4-53P-201ENST00000410828 ROBO3Q96MS0 1386 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 DOCK1Q14185 1865 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 PTPRFP10586 1907 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 A0A1B0GUL6 1792 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 A0A1W2PRG0 241 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 FAM86C2PA6NEL3 165 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZBBXA8MT70 800 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 KIF28PB7ZC32 967 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 RFXAPO00287 272 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 MPHOSPH10O00566 681 aaKnown RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 WDR46O15213 610 aaKnown RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 IDH1O75874 414 aaKnown RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 CABYRO75952 493 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 SNAI1O95863 264 aaPredicted RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 CYP2E1P05181 493 aaPredicted RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 POLR3DP05423 398 aaPredicted RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 PFKMP08237 780 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 GNAI3P08754 354 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ALADP13716 330 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 MYOGP15173 224 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ATP2A2P16615 1042 aaKnown RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 CYP7A1P22680 504 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 CYP2C18P33260 490 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 GUCY1A2P33402 732 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 SHMT1P34896 483 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 STAT3P40763 770 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 RABGGTBP53611 331 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 CCL23P55773 120 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 GJA9P57773 515 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 DYNLL1P63167 89 aaKnown RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 MTX1Q13505 466 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ACVR2BQ13705 512 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 TMEM132BQ14DG7 1078 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 SEPT2Q15019 361 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 CSPP1Q1MSJ5 1256 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ALDH1L2Q3SY69 923 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 TTC39AQ5SRH9 613 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 CCSAPQ6IQ19 270 aaPredicted RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 TMED8Q6PL24 325 aaPredicted RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 SAMD1Q6SPF0 538 aaPredicted RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 TMEM179Q6ZVK1 233 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ADGRA1Q86SQ6 560 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 RIOX2Q8IUF8 465 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 SPICE1Q8N0Z3 855 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 MIGA1Q8NAN2 632 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 PHOSPHO2Q8TCD6 241 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 LENG1Q96BZ8 264 aaPredicted RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ZNF512BQ96KM6 892 aaPredicted RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 API5Q9BZZ5 524 aaKnown RBP2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 KCNH6Q9H252 994 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ABHD16BQ9H3Z7 469 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 HIPK3Q9H422 1215 aa2.88□□□□□ -1.95
RNU4-53P-201ENST00000410828 ARHGEF10LQ9HCE6 1279 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms