RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 F5H6K3 240 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 STRNO43815 780 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 RAD21O60216 631 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 FARP2O94887 1054 aaPredicted RBP23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 KLRC3Q07444 240 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 ALX1Q15699 326 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 FAM83BQ5T0W9 1011 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 VPS53Q5VIR6 699 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 NEDD1Q8NHV4 660 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 CEP95Q96GE4 821 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 MROH8Q9H579 483 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 FBXO28Q9NVF7 368 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 SYNPO2Q9UMS6 1093 aa23.33■■□□□ 1.33
TSPAN4-209ENST00000409543 TSPY3P0CV98 308 aa23.32■■□□□ 1.32
TSPAN4-209ENST00000409543 TSPY8P0CW00 308 aa23.32■■□□□ 1.32
TSPAN4-209ENST00000409543 ERCC3P19447 782 aa23.32■■□□□ 1.32
TSPAN4-209ENST00000409543 CACNB2Q08289 660 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-209ENST00000409543 PLS1Q14651 629 aa23.32■■□□□ 1.32
TSPAN4-209ENST00000409543 RILPL2Q969X0 211 aa23.32■■□□□ 1.32
TSPAN4-209ENST00000409543 ANAPC4Q9UJX5 808 aa23.32■■□□□ 1.32
TSPAN4-209ENST00000409543 PPP1R9AQ9ULJ8 1098 aa23.32■■□□□ 1.32
TSPAN4-209ENST00000409543 A0A0D9SFI3 127 aa23.31■■□□□ 1.32
TSPAN4-209ENST00000409543 TTLL1O95922 423 aa23.31■■□□□ 1.32
TSPAN4-209ENST00000409543 NDUFB10O96000 172 aa23.31■■□□□ 1.32
TSPAN4-209ENST00000409543 TFAP4Q01664 338 aa23.31■■□□□ 1.32
TSPAN4-209ENST00000409543 TMEM132BQ14DG7 1078 aa23.31■■□□□ 1.32
TSPAN4-209ENST00000409543 SAMD1Q6SPF0 538 aaPredicted RBP23.31■■□□□ 1.32
TSPAN4-209ENST00000409543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.31■■□□□ 1.32
TSPAN4-209ENST00000409543 VWA5AO00534 786 aa23.3■■□□□ 1.32
TSPAN4-209ENST00000409543 NMIQ13287 307 aaPredicted RBP23.3■■□□□ 1.32
TSPAN4-209ENST00000409543 FAM47AQ5JRC9 791 aa23.3■■□□□ 1.32
TSPAN4-209ENST00000409543 ANKLE1Q8NAG6 615 aa23.3■■□□□ 1.32
TSPAN4-209ENST00000409543 NUP88Q99567 741 aaPredicted RBP23.3■■□□□ 1.32
TSPAN4-209ENST00000409543 HTATIP2Q9BUP3 242 aa23.3■■□□□ 1.32
TSPAN4-209ENST00000409543 ZNF236Q9UL36 1845 aa23.29■■□□□ 1.32
TSPAN4-209ENST00000409543 SLC25A27O95847 323 aa23.29■■□□□ 1.32
TSPAN4-209ENST00000409543 ADORA2AP29274 412 aa23.29■■□□□ 1.32
TSPAN4-209ENST00000409543 CTDSPL2Q05D32 466 aa23.29■■□□□ 1.32
TSPAN4-209ENST00000409543 MFSD14CQ5VZR4 134 aa23.29■■□□□ 1.32
TSPAN4-209ENST00000409543 DPP9Q86TI2 863 aa23.29■■□□□ 1.32
TSPAN4-209ENST00000409543 NCAPG2Q86XI2 1143 aa23.29■■□□□ 1.32
TSPAN4-209ENST00000409543 ABRAQ8N0Z2 381 aa23.29■■□□□ 1.32
TSPAN4-209ENST00000409543 NPLOC4Q8TAT6 608 aa23.29■■□□□ 1.32
TSPAN4-209ENST00000409543 FLRT1Q9NZU1 646 aa23.29■■□□□ 1.32
TSPAN4-209ENST00000409543 MYH4Q9Y623 1939 aa23.29■■□□□ 1.32
TSPAN4-209ENST00000409543 FGAP02671 866 aa23.28■■□□□ 1.32
TSPAN4-209ENST00000409543 SDSP20132 328 aa23.28■■□□□ 1.32
TSPAN4-209ENST00000409543 PPP4R3BQ5MIZ7 849 aa23.28■■□□□ 1.32
TSPAN4-209ENST00000409543 RIOX2Q8IUF8 465 aa23.28■■□□□ 1.32
TSPAN4-209ENST00000409543 GMCL1P1Q8NEA9 526 aa23.28■■□□□ 1.32
TSPAN4-209ENST00000409543 DPF3Q92784 378 aa23.28■■□□□ 1.32
TSPAN4-209ENST00000409543 SLF1Q9BQI6 1058 aa23.28■■□□□ 1.32
TSPAN4-209ENST00000409543 OGDHLQ9ULD0 1010 aa23.28■■□□□ 1.32
TSPAN4-209ENST00000409543 COL11A1P12107 1806 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-209ENST00000409543 IGHA2P01877 340 aa23.27■■□□□ 1.32
TSPAN4-209ENST00000409543 HSPD1P10809 573 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-209ENST00000409543 ZNF589Q86UQ0 364 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-209ENST00000409543 PRPF38AQ8NAV1 312 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-209ENST00000409543 REPS2Q8NFH8 660 aa23.27■■□□□ 1.32
TSPAN4-209ENST00000409543 INCENPQ9NQS7 918 aa23.27■■□□□ 1.32
TSPAN4-209ENST00000409543 ZNF214Q9UL59 606 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-209ENST00000409543 ZMYM6O95789 1325 aa23.27■■□□□ 1.32
TSPAN4-209ENST00000409543 CCDC171Q6TFL3 1326 aa23.27■■□□□ 1.32
TSPAN4-209ENST00000409543 TSPY2A6NKD2 308 aa23.26■■□□□ 1.31
TSPAN4-209ENST00000409543 ORC4O43929 436 aa23.26■■□□□ 1.31
TSPAN4-209ENST00000409543 FGRP09769 529 aa23.26■■□□□ 1.31
TSPAN4-209ENST00000409543 FCER1AP12319 257 aa23.26■■□□□ 1.31
TSPAN4-209ENST00000409543 CCND3P30281 292 aaPredicted RBP23.26■■□□□ 1.31
TSPAN4-209ENST00000409543 STAT3P40763 770 aa23.26■■□□□ 1.31
TSPAN4-209ENST00000409543 MFAP1P55081 439 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-209ENST00000409543 LRRC47Q8N1G4 583 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-209ENST00000409543 PAWRQ96IZ0 340 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-209ENST00000409543 SLC5A4Q9NY91 659 aa23.26■■□□□ 1.31
TSPAN4-209ENST00000409543 COBLO75128 1261 aa23.25■■□□□ 1.31
TSPAN4-209ENST00000409543 COPB2P35606 906 aa23.25■■□□□ 1.31
TSPAN4-209ENST00000409543 OLFML2BQ68BL8 750 aa23.25■■□□□ 1.31
TSPAN4-209ENST00000409543 NECAB2Q7Z6G3 386 aa23.25■■□□□ 1.31
TSPAN4-209ENST00000409543 FEM1BQ9UK73 627 aa23.25■■□□□ 1.31
TSPAN4-209ENST00000409543 TACC3Q9Y6A5 838 aa23.25■■□□□ 1.31
TSPAN4-209ENST00000409543 CYP2C19P33261 490 aa23.24■■□□□ 1.31
TSPAN4-209ENST00000409543 IRX6P78412 446 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-209ENST00000409543 SLFN13Q68D06 897 aa23.24■■□□□ 1.31
TSPAN4-209ENST00000409543 LHX8Q68G74 356 aa23.24■■□□□ 1.31
TSPAN4-209ENST00000409543 IL17RBQ9NRM6 502 aa23.24■■□□□ 1.31
TSPAN4-209ENST00000409543 CEP290O15078 2479 aa23.24■■□□□ 1.31
TSPAN4-209ENST00000409543 H0YGN5 161 aa23.23■■□□□ 1.31
TSPAN4-209ENST00000409543 HIP1O00291 1037 aa23.23■■□□□ 1.31
TSPAN4-209ENST00000409543 RANBP6O60518 1105 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-209ENST00000409543 MNX1P50219 401 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-209ENST00000409543 DIS3LQ8TF46 1054 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-209ENST00000409543 GMCL1Q96IK5 515 aa23.23■■□□□ 1.31
TSPAN4-209ENST00000409543 TEX13BQ9BXU2 312 aa23.23■■□□□ 1.31
TSPAN4-209ENST00000409543 NBPF3Q9H094 633 aa23.23■■□□□ 1.31
TSPAN4-209ENST00000409543 ATP2A1O14983 1001 aa23.22■■□□□ 1.31
TSPAN4-209ENST00000409543 ZBED4O75132 1171 aa23.22■■□□□ 1.31
TSPAN4-209ENST00000409543 BMP3P12645 472 aa23.22■■□□□ 1.31
TSPAN4-209ENST00000409543 NOVP48745 357 aa23.22■■□□□ 1.31
TSPAN4-209ENST00000409543 KIFC2Q96AC6 838 aa23.22■■□□□ 1.31
TSPAN4-209ENST00000409543 MMP19Q99542 508 aa23.22■■□□□ 1.31
TSPAN4-209ENST00000409543 DIAPH3Q9NSV4 1193 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms