RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 COPB1P53618 953 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 HERVK_113P62684 666 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 KRT31Q15323 416 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 FBXO31Q5XUX0 539 aaPredicted RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 KLHL10Q6JEL2 608 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 RALYLQ86SE5 291 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 SH2D3CQ8N5H7 860 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 TRIM58Q8NG06 486 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 MICAL1Q8TDZ2 1067 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 CUL5Q93034 780 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 SPAG5Q96R06 1193 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 LRRC1Q9BTT6 524 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 KDM4CQ9H3R0 1056 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 FBXO2Q9UK22 296 aaPredicted RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 SNX12Q9UMY4 172 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 RIPOR2Q9Y4F9 1068 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 KDM3BQ7LBC6 1761 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 GMNCA6NCL1 334 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 PDE2AO00408 941 aaPredicted RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 ATP6V1G2O95670 118 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 CCT6AP40227 531 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 SEMA3FQ13275 785 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 RILPL1Q5EBL4 403 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 CAPRIN2Q6IMN6 1127 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 MB21D2Q8IYB1 491 aaPredicted RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 CCDC170Q8IYT3 715 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 STK11IPQ8N1F8 1099 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 SPATA4Q8NEY3 305 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 PURBQ96QR8 312 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 PAG1Q9NWQ8 432 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 LUC7L2Q9Y383 392 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 C4AP0C0L4 1744 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 C4BP0C0L5 1744 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 PRR36Q9H6K5 1346 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 MST1RQ04912 1400 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 PPP1R12BO60237 982 aaPredicted RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 KRT14P02533 472 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 TCP1P17987 556 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 METAP2P50579 478 aaKnown RBP eCLIP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 STX17P56962 302 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 PAK2Q13177 524 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 ITGB3BPQ13352 177 aaPredicted RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 RIPK1Q13546 671 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 TTF1Q15361 905 aaPredicted RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 SAFBQ15424 915 aaKnown RBP eCLIP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 CCDC181Q5TID7 509 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 CREG2Q8IUH2 290 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 CACNA2D3Q8IZS8 1091 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 IQCKQ8N0W5 287 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 WASF1Q92558 559 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 CCDC43Q96MW1 224 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 CHP1Q99653 195 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 NUCKS1Q9H1E3 243 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 NOD2Q9HC29 1040 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 TRPC6Q9Y210 931 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 SRPRBQ9Y5M8 271 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 CPDO75976 1380 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 TOPAZ1Q8N9V7 1692 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 SH2B2O14492 632 aaPredicted RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 ZNF185O15231 689 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 RNF113AO15541 343 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 SEC24CP53992 1094 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 TFCP2Q12800 502 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 C8orf74Q6P047 294 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 NOSTRINQ8IVI9 506 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 CCDC155Q8N6L0 562 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 OSBPL7Q9BZF2 842 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 ZNHIT6Q9NWK9 470 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 DMGDHQ9UI17 866 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 SH3BP1Q9Y3L3 701 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 A0A1W2PQC6 194 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 ERICH2A1L162 156 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 C5orf60A6NFR6 353 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 ZNF233A6NK53 670 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 TACC1O75410 805 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 CHGBP05060 677 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 PAFAH1B1P43034 410 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 KIF5AQ12840 1032 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 TMED8Q6PL24 325 aaPredicted RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 FAM43BQ6ZT52 329 aaPredicted RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 BZW1Q7L1Q6 419 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.5□□□□□ -1.376e-8■■■■■ 40
R3HDM1-202ENST00000409478 TMX4Q9H1E5 349 aaPredicted RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 RWDD2AQ9UIY3 292 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 CORO1CQ9ULV4 474 aaPredicted RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 C15orf41Q9Y2V0 281 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 MAST3O60307 1309 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 PPP1R3GB7ZBB8 358 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 DNM1LO00429 736 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 ANXA1P04083 346 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 CD44P16070 742 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 ELF3P78545 371 aaPredicted RBP6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 UBXN1Q04323 297 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 TCP11X2Q5H9J9 407 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 HAUS3Q68CZ6 603 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 LRIG3Q6UXM1 1119 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 GRAMD1CQ8IYS0 662 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 WHAMMQ8TF30 809 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 NSMCE1Q8WV22 266 aa6.5□□□□□ -1.37
R3HDM1-202ENST00000409478 RBM33Q96EV2 1170 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms