RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 ARMC3Q5W041 872 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 MSL1Q68DK7 614 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 LACRTQ9GZZ8 138 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 STIM2Q9P246 746 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 BACH1O14867 736 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 PRC1O43663 620 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 ACTN4O43707 911 aaKnown RBP14.28□□□□□ -0.12
HERC3-203ENST00000407637 ELF3P78545 371 aaPredicted RBP14.28□□□□□ -0.12
HERC3-203ENST00000407637 TNNI3KQ59H18 835 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 CCDC181Q5TID7 509 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 HAUS3Q68CZ6 603 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 MIS18BP1Q6P0N0 1132 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 CUL5Q93034 780 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 SPAG5Q96R06 1193 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 DBNDD2Q9BQY9 259 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 NUCKS1Q9H1E3 243 aaKnown RBP14.28□□□□□ -0.12
HERC3-203ENST00000407637 EBF2Q9HAK2 575 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 TAB2Q9NYJ8 693 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 C15orf41Q9Y2V0 281 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 FPGT-TNNI3KV9GXZ4 949 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 MACROD2A1Z1Q3 448 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 KCNQ3O43525 872 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 SMNDC1O75940 238 aaKnown RBP eCLIP14.28□□□□□ -0.12
HERC3-203ENST00000407637 EIF4A1P60842 406 aaKnown RBP14.28□□□□□ -0.12
HERC3-203ENST00000407637 CREG2Q8IUH2 290 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 EHBP1Q8NDI1 1231 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 HAUS7Q99871 368 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 EHD2Q9NZN4 543 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 DUSP10Q9Y6W6 482 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 PRR36Q9H6K5 1346 aa14.27□□□□□ -0.12
HERC3-203ENST00000407637 ADRA2BP18089 450 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 PSMD2Q13200 908 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 ITGB3BPQ13352 177 aaPredicted RBP14.27□□□□□ -0.13
HERC3-203ENST00000407637 KBTBD3Q8NAB2 608 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 ATP6V1G3Q96LB4 118 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 CTNND2Q9UQB3 1225 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 LEMD3Q9Y2U8 911 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 MAP3K15Q6ZN16 1313 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 DDX60Q8IY21 1712 aaKnown RBP14.27□□□□□ -0.13
HERC3-203ENST00000407637 ANO9A1A5B4 782 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 KRT86O43790 486 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 IPO7O95373 1038 aaKnown RBP14.27□□□□□ -0.13
HERC3-203ENST00000407637 FAM153BP0C7A2 387 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 TFCP2Q12800 502 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 DPYDQ12882 1025 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 PROSER3Q2NL68 480 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 FAM153CQ494X1 144 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 EMC10Q5UCC4 262 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 HIBCHQ6NVY1 386 aaPredicted RBP14.27□□□□□ -0.13
HERC3-203ENST00000407637 C3orf20Q8ND61 904 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 SPATA4Q8NEY3 305 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 SPATA20Q8TB22 786 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 RUBCNQ92622 972 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 HOMER3Q9NSC5 361 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 BABAM1Q9NWV8 329 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 FAM153AQ9UHL3 310 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 L3MBTL1Q9Y468 752 aa14.27□□□□□ -0.13
HERC3-203ENST00000407637 NWD2Q9ULI1 1742 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 TSPOAP1O95153 1857 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 SEMA3EO15041 775 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 RXRAP19793 462 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 AFMP43652 599 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 BYSLQ13895 437 aaKnown RBP14.26□□□□□ -0.13
HERC3-203ENST00000407637 TRIM14Q14142 442 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 USP49Q70CQ1 688 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 IQCKQ8N0W5 287 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 PHKBQ93100 1093 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 CCDC47Q96A33 483 aaKnown RBP14.26□□□□□ -0.13
HERC3-203ENST00000407637 HVCN1Q96D96 273 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 SEC16BQ96JE7 1060 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 ZNF570Q96NI8 536 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 PSMB7Q99436 277 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 MLH3Q9UHC1 1453 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 TTC26A0AVF1 554 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 ANP32DO95626 131 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 COPB1P53618 953 aaKnown RBP14.26□□□□□ -0.13
HERC3-203ENST00000407637 FBXL16Q8N461 479 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 PIK3R5Q8WYR1 880 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 FAM210AQ96ND0 272 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 FBXO2Q9UK22 296 aaPredicted RBP14.26□□□□□ -0.13
HERC3-203ENST00000407637 MAST3O60307 1309 aa14.26□□□□□ -0.13
HERC3-203ENST00000407637 FLT4P35916 1363 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 GMNCA6NCL1 334 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 DNAJC8O75937 253 aaPredicted RBP14.25□□□□□ -0.13
HERC3-203ENST00000407637 PPP1R7Q15435 360 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 ACSBG1Q96GR2 724 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 HELLSQ9NRZ9 838 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 SNX12Q9UMY4 172 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 MST1RQ04912 1400 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 ESYT3A0FGR9 886 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 GUCY2FP51841 1108 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 ANTXR2P58335 489 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 LACTB2Q53H82 288 aaPredicted RBP14.25□□□□□ -0.13
HERC3-203ENST00000407637 KSR2Q6VAB6 950 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 TXNDC2Q86VQ3 553 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 CACNA2D3Q8IZS8 1091 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 FNBP4Q8N3X1 1017 aaPredicted RBP14.25□□□□□ -0.13
HERC3-203ENST00000407637 SMCR8Q8TEV9 937 aaPredicted RBP14.25□□□□□ -0.13
HERC3-203ENST00000407637 NFU1Q9UMS0 254 aa14.25□□□□□ -0.13
HERC3-203ENST00000407637 SRRM3A6NNA2 597 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms