RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 TTC38Q5R3I4 469 aa17.64■□□□□ 0.41
CCDC85A-201ENST00000407595 FNBP4Q8N3X1 1017 aaPredicted RBP17.64■□□□□ 0.41
CCDC85A-201ENST00000407595 RABGGTAQ92696 567 aa17.64■□□□□ 0.41
CCDC85A-201ENST00000407595 ADAM21Q9UKJ8 722 aa17.64■□□□□ 0.41
CCDC85A-201ENST00000407595 COL5A2P05997 1499 aaPredicted RBP17.64■□□□□ 0.41
CCDC85A-201ENST00000407595 STX10O60499 249 aa17.64■□□□□ 0.41
CCDC85A-201ENST00000407595 TMEM266Q2M3C6 531 aa17.64■□□□□ 0.41
CCDC85A-201ENST00000407595 TOGARAM2Q6ZUX3 1019 aa17.64■□□□□ 0.41
CCDC85A-201ENST00000407595 CNGA4Q8IV77 575 aa17.64■□□□□ 0.41
CCDC85A-201ENST00000407595 TRIM47Q96LD4 638 aa17.64■□□□□ 0.41
CCDC85A-201ENST00000407595 CTNND2Q9UQB3 1225 aa17.64■□□□□ 0.41
CCDC85A-201ENST00000407595 USP42Q9H9J4 1324 aaKnown RBP17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 FAM170AA1A519 330 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 NTSR2O95665 410 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 CC2D1AQ6P1N0 951 aaPredicted RBP17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 TAB2Q9NYJ8 693 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 CTDNEP1O95476 244 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 CCDC122Q5T0U0 273 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 DTHD1Q6ZMT9 781 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 SMYD4Q8IYR2 804 aaPredicted RBP17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 BIN2Q9UBW5 565 aaPredicted RBP17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 MED23Q9ULK4 1368 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 MTIF2P46199 727 aaKnown RBP17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 INF2Q27J81 1249 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 SPICE1Q8N0Z3 855 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 SH3RF3Q8TEJ3 882 aaPredicted RBP17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 CALML4Q96GE6 196 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 C6orf50Q9HD87 102 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 FAN1Q9Y2M0 1017 aa17.63■□□□□ 0.41
CCDC85A-201ENST00000407595 USP17L2Q6R6M4 530 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 TXNRD3Q86VQ6 643 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 SAMM50Q9Y512 469 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 TCP10L2B9ZVM9 353 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 KLRF2D3W0D1 207 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 CALML3P27482 149 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 TTLL12Q14166 644 aaPredicted RBP17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 TXNRD1Q16881 649 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 RNF187Q5TA31 235 aaPredicted RBP17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 IQCEQ6IPM2 695 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 RBM43Q6ZSC3 357 aaKnown RBP17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 RGS22Q8NE09 1264 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 FOXN1O15353 648 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 CCNT1O60563 726 aaKnown RBP17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 RAD17O75943 681 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 GRAPQ13588 217 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 BRD3Q15059 726 aa17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 GRAPLQ8TC17 118 aaPredicted RBP17.62■□□□□ 0.41
CCDC85A-201ENST00000407595 ENGASEQ8NFI3 743 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 MXD3Q9BW11 206 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 SYNRGQ9UMZ2 1314 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 CAMTA1Q9Y6Y1 1673 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 MACROD2A1Z1Q3 448 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 MCM3P25205 808 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 CYP2C19P33261 490 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 SLC16A2P36021 539 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 SP4Q02446 784 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 TSGA10IPQ3SY00 556 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 ODF2Q5BJF6 829 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 NLGN1Q8N2Q7 840 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 SLC35F6Q8N357 371 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 MMRN2Q9H8L6 949 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 PEAK1Q9H792 1746 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 PPEF1O14829 653 aaPredicted RBP17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 ATP2B4P23634 1241 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 SLC1A4P43007 532 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 TCERG1LQ5VWI1 586 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 MB21D2Q8IYB1 491 aaPredicted RBP17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 JDP2Q8WYK2 163 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 PSMB7Q99436 277 aa17.61■□□□□ 0.41
CCDC85A-201ENST00000407595 TADA3O75528 432 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 ZMYND10O75800 440 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 GUCY1A2P33402 732 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 RBM28Q9NW13 759 aaKnown RBP17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 ARPP21Q9UBL0 812 aaPredicted RBP17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 LUC7L2Q9Y383 392 aaKnown RBP17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 KIF28PB7ZC32 967 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 SMIM22K7EJ46 135 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 CASP14P31944 242 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 MTF1Q14872 753 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 SRGAP1Q7Z6B7 1085 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 RRP15Q9Y3B9 282 aaKnown RBP17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 PIK3C2AO00443 1686 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 ENC1O14682 589 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 ZEB2O60315 1214 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 PLA2G4AP47712 749 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 CPXCR1Q8N123 301 aa17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 SCAF8Q9UPN6 1271 aaKnown RBP17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 ATF5Q9Y2D1 282 aaPredicted RBP17.6■□□□□ 0.41
CCDC85A-201ENST00000407595 PAFAH1B1P43034 410 aa17.59■□□□□ 0.41
CCDC85A-201ENST00000407595 IRX3P78415 501 aaPredicted RBP17.59■□□□□ 0.41
CCDC85A-201ENST00000407595 VPS72Q15906 364 aa17.59■□□□□ 0.41
CCDC85A-201ENST00000407595 TEKT1Q969V4 418 aa17.59■□□□□ 0.41
CCDC85A-201ENST00000407595 MYO1CO00159 1063 aa17.59■□□□□ 0.41
CCDC85A-201ENST00000407595 CLEC10AQ8IUN9 316 aa17.59■□□□□ 0.41
CCDC85A-201ENST00000407595 AFAP1L1Q8TED9 768 aa17.59■□□□□ 0.41
CCDC85A-201ENST00000407595 KCNB2Q92953 911 aa17.59■□□□□ 0.41
CCDC85A-201ENST00000407595 CUL5Q93034 780 aa17.59■□□□□ 0.41
CCDC85A-201ENST00000407595 RAB34Q9BZG1 259 aa17.59■□□□□ 0.41
CCDC85A-201ENST00000407595 CDC23Q9UJX2 597 aa17.59■□□□□ 0.41
CCDC85A-201ENST00000407595 ZBTB21Q9ULJ3 1066 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms