RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 CDC25AP30304 524 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 LONP1P36776 959 aaKnown RBP19.7■□□□□ 0.74
SNED1-204ENST00000401884 TRAPPC10P48553 1259 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 RRAGAQ7L523 313 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 ATG9AQ7Z3C6 839 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 MB21D2Q8IYB1 491 aaPredicted RBP19.7■□□□□ 0.74
SNED1-204ENST00000401884 ISCA1Q9BUE6 129 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 CTNNA2P26232 953 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 TYW1BQ6NUM6 668 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 NEK8Q86SG6 692 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 FAM76AQ8TAV0 307 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 NOX5Q96PH1 765 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 IFIH1Q9BYX4 1025 aaKnown RBP19.7■□□□□ 0.74
SNED1-204ENST00000401884 SRPRBQ9Y5M8 271 aaKnown RBP19.7■□□□□ 0.74
SNED1-204ENST00000401884 TAF6LQ9Y6J9 622 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 EPB41P11171 864 aaKnown RBP19.7■□□□□ 0.74
SNED1-204ENST00000401884 DESP17661 470 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 OAS2P29728 719 aaKnown RBP19.7■□□□□ 0.74
SNED1-204ENST00000401884 SMC1AQ14683 1233 aaKnown RBP19.7■□□□□ 0.74
SNED1-204ENST00000401884 VWA3BQ502W6 1294 aa19.7■□□□□ 0.74
SNED1-204ENST00000401884 EPN1Q9Y6I3 576 aaPredicted RBP19.7■□□□□ 0.74
SNED1-204ENST00000401884 REREQ9P2R6 1566 aa19.69■□□□□ 0.74
SNED1-204ENST00000401884 TCP10Q12799 353 aa19.69■□□□□ 0.74
SNED1-204ENST00000401884 COPB1P53618 953 aaKnown RBP19.69■□□□□ 0.74
SNED1-204ENST00000401884 KCNQ4P56696 695 aa19.69■□□□□ 0.74
SNED1-204ENST00000401884 IBSPP21815 317 aaPredicted RBP19.69■□□□□ 0.74
SNED1-204ENST00000401884 EPSTI1Q96J88 318 aa19.69■□□□□ 0.74
SNED1-204ENST00000401884 ZBTB21Q9ULJ3 1066 aa19.69■□□□□ 0.74
SNED1-204ENST00000401884 CHMP2AO43633 222 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 NCAPH2Q6IBW4 605 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 GALNT17Q6IS24 598 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 CYB5R4Q7L1T6 521 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 HAUS4Q9H6D7 363 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 SEMA3EO15041 775 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 UTP14CQ5TAP6 766 aaKnown RBP19.68■□□□□ 0.74
SNED1-204ENST00000401884 DPP8Q6V1X1 898 aaPredicted RBP19.68■□□□□ 0.74
SNED1-204ENST00000401884 CCDC155Q8N6L0 562 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 BRD3Q15059 726 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 VSTM4Q8IW00 320 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 DNM3Q9UQ16 869 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 TRIM28Q13263 835 aaKnown RBP19.68■□□□□ 0.74
SNED1-204ENST00000401884 ERFEQ4G0M1 354 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 GDAP1L1Q96MZ0 367 aa19.68■□□□□ 0.74
SNED1-204ENST00000401884 CEMIPQ8WUJ3 1361 aa19.67■□□□□ 0.74
SNED1-204ENST00000401884 ARFGAP2Q8N6H7 521 aa19.67■□□□□ 0.74
SNED1-204ENST00000401884 EXOSC10Q01780 885 aaKnown RBP19.67■□□□□ 0.74
SNED1-204ENST00000401884 KLHL30Q0D2K2 578 aa19.67■□□□□ 0.74
SNED1-204ENST00000401884 CCDC144BQ3MJ40 725 aa19.67■□□□□ 0.74
SNED1-204ENST00000401884 HOOK3Q86VS8 718 aa19.67■□□□□ 0.74
SNED1-204ENST00000401884 SCLT1Q96NL6 688 aa19.67■□□□□ 0.74
SNED1-204ENST00000401884 TMEM110-MUSTN1A8MSY1 372 aa19.67■□□□□ 0.74
SNED1-204ENST00000401884 PTPREP23469 700 aa19.67■□□□□ 0.74
SNED1-204ENST00000401884 PKD2L1Q9P0L9 805 aa19.67■□□□□ 0.74
SNED1-204ENST00000401884 PCDHA12Q9UN75 941 aa19.67■□□□□ 0.74
SNED1-204ENST00000401884 FRMD4BQ9Y2L6 1034 aa19.67■□□□□ 0.74
SNED1-204ENST00000401884 COL3A1P02461 1466 aaPredicted RBP19.67■□□□□ 0.74
SNED1-204ENST00000401884 WHAMMP3Q1A5X7 153 aa19.66■□□□□ 0.74
SNED1-204ENST00000401884 PLA2G4DQ86XP0 818 aa19.66■□□□□ 0.74
SNED1-204ENST00000401884 TLDC2A0PJX2 215 aa19.66■□□□□ 0.74
SNED1-204ENST00000401884 BTDP43251 543 aa19.66■□□□□ 0.74
SNED1-204ENST00000401884 SLC39A2Q9NP94 309 aa19.66■□□□□ 0.74
SNED1-204ENST00000401884 RASAL2Q9UJF2 1139 aa19.66■□□□□ 0.74
SNED1-204ENST00000401884 LRRC47Q8N1G4 583 aaKnown RBP19.66■□□□□ 0.74
SNED1-204ENST00000401884 USP40Q9NVE5 1235 aa19.66■□□□□ 0.74
SNED1-204ENST00000401884 PRPF3O43395 683 aaKnown RBP19.66■□□□□ 0.74
SNED1-204ENST00000401884 ATP2C2O75185 946 aa19.66■□□□□ 0.74
SNED1-204ENST00000401884 ASIC2Q16515 512 aa19.66■□□□□ 0.74
SNED1-204ENST00000401884 BBXQ8WY36 941 aaPredicted RBP19.66■□□□□ 0.74
SNED1-204ENST00000401884 NT5C3AQ9H0P0 336 aa19.66■□□□□ 0.74
SNED1-204ENST00000401884 FRMPD2Q68DX3 1309 aaPredicted RBP19.65■□□□□ 0.74
SNED1-204ENST00000401884 USH1GQ495M9 461 aa19.65■□□□□ 0.74
SNED1-204ENST00000401884 RGS22Q8NE09 1264 aa19.65■□□□□ 0.74
SNED1-204ENST00000401884 AFAP1L1Q8TED9 768 aa19.65■□□□□ 0.74
SNED1-204ENST00000401884 CDC27P30260 824 aa19.65■□□□□ 0.74
SNED1-204ENST00000401884 RBL2Q08999 1139 aa19.65■□□□□ 0.74
SNED1-204ENST00000401884 MYOCDQ8IZQ8 938 aa19.65■□□□□ 0.74
SNED1-204ENST00000401884 CDC23Q9UJX2 597 aa19.65■□□□□ 0.74
SNED1-204ENST00000401884 ZNF609O15014 1411 aa19.65■□□□□ 0.74
SNED1-204ENST00000401884 VWDEQ8N2E2 1590 aa19.65■□□□□ 0.74
SNED1-204ENST00000401884 CD163L1Q9NR16 1453 aa19.65■□□□□ 0.74
SNED1-204ENST00000401884 C10orf67Q8IYJ2 551 aa19.64■□□□□ 0.74
SNED1-204ENST00000401884 NEDD4P46934 1319 aa19.64■□□□□ 0.74
SNED1-204ENST00000401884 RESP18Q5W5W9 173 aa19.64■□□□□ 0.73
SNED1-204ENST00000401884 RABGGTAQ92696 567 aa19.64■□□□□ 0.73
SNED1-204ENST00000401884 TUBGCP2Q9BSJ2 902 aa19.64■□□□□ 0.73
SNED1-204ENST00000401884 SND1Q7KZF4 910 aaKnown RBP eCLIP19.64■□□□□ 0.73
SNED1-204ENST00000401884 RPGRIP1Q96KN7 1286 aa19.64■□□□□ 0.73
SNED1-204ENST00000401884 TCHPQ9BT92 498 aa19.64■□□□□ 0.73
SNED1-204ENST00000401884 PXDNLA1KZ92 1463 aa19.64■□□□□ 0.73
SNED1-204ENST00000401884 SFMBT2Q5VUG0 894 aa19.64■□□□□ 0.73
SNED1-204ENST00000401884 PDIA6Q15084 440 aa19.63■□□□□ 0.73
SNED1-204ENST00000401884 SLC35F6Q8N357 371 aa19.63■□□□□ 0.73
SNED1-204ENST00000401884 IQCDQ96DY2 449 aa19.63■□□□□ 0.73
SNED1-204ENST00000401884 PCDHA4Q9UN74 947 aa19.63■□□□□ 0.73
SNED1-204ENST00000401884 USP17L8P0C7I0 530 aa19.63■□□□□ 0.73
SNED1-204ENST00000401884 STAG1Q8WVM7 1258 aa19.63■□□□□ 0.73
SNED1-204ENST00000401884 PSTPIP2Q9H939 334 aa19.63■□□□□ 0.73
SNED1-204ENST00000401884 WDR19Q8NEZ3 1342 aa19.63■□□□□ 0.73
SNED1-204ENST00000401884 PLEKHA8P1O95397 391 aa19.63■□□□□ 0.73
SNED1-204ENST00000401884 ATP2B4P23634 1241 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms