RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 PPP2R2AP63151 447 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 RPS6KA1Q15418 735 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 FERMT2Q96AC1 680 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 KDM4CQ9H3R0 1056 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 ARHGEF5Q12774 1597 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 E7ENQ6 273 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 SART1O43290 800 aaKnown RBP11.01□□□□□ -0.65
PTPRM-203ENST00000400060 CRELD2Q6UXH1 353 aaPredicted RBP11.01□□□□□ -0.65
PTPRM-203ENST00000400060 KIF6Q6ZMV9 814 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 TOGARAM2Q6ZUX3 1019 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 TSPYL6Q8N831 410 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 B4GALNT2Q8NHY0 566 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 CNNM2Q9H8M5 875 aa11.01□□□□□ -0.65
PTPRM-203ENST00000400060 GRID2IPA4D2P6 1211 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 CPA1P15085 419 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 CCT6AP40227 531 aaKnown RBP11□□□□□ -0.65
PTPRM-203ENST00000400060 PDE6CP51160 858 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 RBL2Q08999 1139 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
PTPRM-203ENST00000400060 TBC1D1Q86TI0 1168 aaPredicted RBP11□□□□□ -0.65
PTPRM-203ENST00000400060 CALML4Q96GE6 196 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 TCP11L1Q9NUJ3 509 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 ADGRG1Q9Y653 693 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 H7C1D1 291 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 ROR2Q01974 943 aaKnown RBP11□□□□□ -0.65
PTPRM-203ENST00000400060 PNOCQ13519 176 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 SLC9C1Q4G0N8 1177 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 HHATQ5VTY9 493 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 BICD1Q96G01 975 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 NDUFA13Q9P0J0 144 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 CTNND1O60716 968 aaKnown RBP11□□□□□ -0.65
PTPRM-203ENST00000400060 TMCC1O94876 653 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 STX2P32856 288 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 GUCY2FP51841 1108 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 AGBL2Q5U5Z8 902 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 SPZ1Q9BXG8 430 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 CCDC8Q9H0W5 538 aaPredicted RBP11□□□□□ -0.65
PTPRM-203ENST00000400060 WDR3Q9UNX4 943 aaKnown RBP eCLIP11□□□□□ -0.65
PTPRM-203ENST00000400060 AMOTL2Q9Y2J4 779 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 CPSF1Q10570 1443 aaKnown RBP11□□□□□ -0.65
PTPRM-203ENST00000400060 RNF8O76064 485 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 PSMC4P43686 418 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 STX17P56962 302 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 TBC1D8BQ0IIM8 1120 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 PTGISQ16647 500 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 CHMP6Q96FZ7 201 aa11□□□□□ -0.65
PTPRM-203ENST00000400060 G3V3G9 751 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 TRIM37O94972 964 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 LSP1P33241 339 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 COG7P83436 770 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 PRPF4BQ13523 1007 aaKnown RBP10.99□□□□□ -0.65
PTPRM-203ENST00000400060 DCAF8Q5TAQ9 597 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 NAA35Q5VZE5 725 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
PTPRM-203ENST00000400060 RAB3IL1Q8TBN0 382 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 VPS16Q9H269 839 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 STRN4Q9NRL3 753 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 HEXIM1O94992 359 aaKnown RBP10.99□□□□□ -0.65
PTPRM-203ENST00000400060 IFIT1P09914 478 aaKnown RBP10.99□□□□□ -0.65
PTPRM-203ENST00000400060 UBE3BQ7Z3V4 1068 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 TCEANC2Q96MN5 208 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 DBF4Q9UBU7 674 aaPredicted RBP10.99□□□□□ -0.65
PTPRM-203ENST00000400060 ZNF148Q9UQR1 794 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 SOWAHDA6NJG2 315 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 DCTN3O75935 186 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 CTCFP49711 727 aaPredicted RBP10.99□□□□□ -0.65
PTPRM-203ENST00000400060 ITIH4Q14624 930 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 SLC39A14Q15043 492 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 CCNI2Q6ZMN8 369 aaPredicted RBP10.99□□□□□ -0.65
PTPRM-203ENST00000400060 TEKT4Q8WW24 435 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 SLC26A6Q9BXS9 759 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 CORO1CQ9ULV4 474 aaPredicted RBP10.99□□□□□ -0.65
PTPRM-203ENST00000400060 ABCD1P33897 745 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 GUCY2DQ02846 1103 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 MAP3K12Q12852 859 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 TMEM266Q2M3C6 531 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 ABTB1Q969K4 478 aaPredicted RBP10.99□□□□□ -0.65
PTPRM-203ENST00000400060 GRAMD1AQ96CP6 724 aa10.99□□□□□ -0.65
PTPRM-203ENST00000400060 THOC1Q96FV9 657 aaKnown RBP10.99□□□□□ -0.65
PTPRM-203ENST00000400060 ARHGAP10A1A4S6 786 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 KCNJ18B7U540 433 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 UBA7P41226 1012 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 SKOR1P84550 965 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 DEUP1Q05D60 604 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 KCNJ12Q14500 433 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 CFAP157Q5JU67 520 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 PPP1R21Q6ZMI0 780 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 EP400NLQ6ZTU2 488 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 NSMCE1Q8WV22 266 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 MAP4K1Q92918 833 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 PBKQ96KB5 322 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 WDR24Q96S15 920 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 NOC4LQ9BVI4 516 aaKnown RBP10.98□□□□□ -0.65
PTPRM-203ENST00000400060 ACEP12821 1306 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 ATP10AO60312 1499 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 NDUFA10O95299 355 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 KRT13P13646 458 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 MYL6BP14649 208 aa10.98□□□□□ -0.65
PTPRM-203ENST00000400060 C6orf118Q5T5N4 469 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms