RNA–Protein interactions for RNA: ENST00000399892.6

SEH1L-202, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best) BASIC

Gene SEH1L, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-202ENST00000399892 CCDC96Q2M329 555 aa20.75■□□□□ 0.91
SEH1L-202ENST00000399892 CATSPERGQ6ZRH7 1159 aa20.75■□□□□ 0.91
SEH1L-202ENST00000399892 IGDCC4Q8TDY8 1250 aa20.75■□□□□ 0.91
SEH1L-202ENST00000399892 C22orf23Q9BZE7 217 aa20.75■□□□□ 0.91
SEH1L-202ENST00000399892 CYP46A1Q9Y6A2 500 aa20.75■□□□□ 0.91
SEH1L-202ENST00000399892 CCDC69A6NI79 296 aa20.74■□□□□ 0.91
SEH1L-202ENST00000399892 GMCL1Q96IK5 515 aa20.74■□□□□ 0.91
SEH1L-202ENST00000399892 BACH2Q9BYV9 841 aa20.74■□□□□ 0.91
SEH1L-202ENST00000399892 RPS6KB1P23443 525 aa20.74■□□□□ 0.91
SEH1L-202ENST00000399892 COL9A3Q14050 684 aaPredicted RBP20.74■□□□□ 0.91
SEH1L-202ENST00000399892 RUFY3Q7L099 469 aa20.74■□□□□ 0.91
SEH1L-202ENST00000399892 CATIPQ7Z7H3 387 aa20.74■□□□□ 0.91
SEH1L-202ENST00000399892 DCAF4Q8WV16 495 aa20.74■□□□□ 0.91
SEH1L-202ENST00000399892 TM6SF1Q9BZW5 370 aa20.74■□□□□ 0.91
SEH1L-202ENST00000399892 SH2B2O14492 632 aaPredicted RBP20.73■□□□□ 0.91
SEH1L-202ENST00000399892 HSPA1AP0DMV8 641 aaKnown RBP20.73■□□□□ 0.91
SEH1L-202ENST00000399892 HSPA1BP0DMV9 641 aaKnown RBP20.73■□□□□ 0.91
SEH1L-202ENST00000399892 EXOSC10Q01780 885 aaKnown RBP20.73■□□□□ 0.91
SEH1L-202ENST00000399892 COG2Q14746 738 aa20.73■□□□□ 0.91
SEH1L-202ENST00000399892 UPF3BQ9BZI7 483 aaKnown RBP20.73■□□□□ 0.91
SEH1L-202ENST00000399892 LY9Q9HBG7 655 aa20.73■□□□□ 0.91
SEH1L-202ENST00000399892 HOXC10Q9NYD6 342 aa20.73■□□□□ 0.91
SEH1L-202ENST00000399892 TSKSQ9UJT2 592 aa20.73■□□□□ 0.91
SEH1L-202ENST00000399892 TLR2O60603 784 aa20.72■□□□□ 0.91
SEH1L-202ENST00000399892 LIFRP42702 1097 aa20.72■□□□□ 0.91
SEH1L-202ENST00000399892 KCTD1Q719H9 257 aa20.72■□□□□ 0.91
SEH1L-202ENST00000399892 P2RX7Q99572 595 aaKnown RBP20.72■□□□□ 0.91
SEH1L-202ENST00000399892 ZSWIM6Q9HCJ5 1215 aa20.72■□□□□ 0.91
SEH1L-202ENST00000399892 GPHNQ9NQX3 736 aaPredicted RBP20.72■□□□□ 0.91
SEH1L-202ENST00000399892 TMEM232C9JQI7 657 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 PDHBP11177 359 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 STAT2P52630 851 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 HERVK_113P62684 666 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 SYNE3Q6ZMZ3 975 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 SENP2Q9HC62 589 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 FEM1BQ9UK73 627 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 GCLCP48506 637 aaPredicted RBP20.71■□□□□ 0.91
SEH1L-202ENST00000399892 Q6ZUG5 572 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 RASGRP2Q7LDG7 609 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 GTF3C2Q8WUA4 911 aaPredicted RBP20.71■□□□□ 0.91
SEH1L-202ENST00000399892 CHURC1Q8WUH1 139 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 CFHR5Q9BXR6 569 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 SLC12A7Q9Y666 1083 aa20.71■□□□□ 0.91
SEH1L-202ENST00000399892 FRMPD2Q68DX3 1309 aaPredicted RBP20.71■□□□□ 0.91
SEH1L-202ENST00000399892 NUP133Q8WUM0 1156 aa20.7■□□□□ 0.9
SEH1L-202ENST00000399892 SLF1Q9BQI6 1058 aa20.7■□□□□ 0.9
SEH1L-202ENST00000399892 GPCPD1Q9NPB8 672 aa20.7■□□□□ 0.9
SEH1L-202ENST00000399892 FBXO28Q9NVF7 368 aa20.7■□□□□ 0.9
SEH1L-202ENST00000399892 CPA4Q9UI42 421 aa20.7■□□□□ 0.9
SEH1L-202ENST00000399892 NAP1L2Q9ULW6 460 aaPredicted RBP20.7■□□□□ 0.9
SEH1L-202ENST00000399892 CTDP1Q9Y5B0 961 aaPredicted RBP20.7■□□□□ 0.9
SEH1L-202ENST00000399892 PARP14Q460N5 1801 aa20.7■□□□□ 0.9
SEH1L-202ENST00000399892 PARP1P09874 1014 aaKnown RBP20.69■□□□□ 0.9
SEH1L-202ENST00000399892 GPATCH4Q5T3I0 446 aaKnown RBP20.69■□□□□ 0.9
SEH1L-202ENST00000399892 ZNF654Q8IZM8 581 aa20.69■□□□□ 0.9
SEH1L-202ENST00000399892 PRPF38AQ8NAV1 312 aaKnown RBP20.69■□□□□ 0.9
SEH1L-202ENST00000399892 KIFC2Q96AC6 838 aa20.69■□□□□ 0.9
SEH1L-202ENST00000399892 PAGR1Q9BTK6 254 aa20.69■□□□□ 0.9
SEH1L-202ENST00000399892 PDRG1Q9NUG6 133 aa20.69■□□□□ 0.9
SEH1L-202ENST00000399892 DSG3P32926 999 aa20.69■□□□□ 0.9
SEH1L-202ENST00000399892 FAM160B2Q86V87 743 aa20.69■□□□□ 0.9
SEH1L-202ENST00000399892 ANKRD13CQ8N6S4 541 aa20.69■□□□□ 0.9
SEH1L-202ENST00000399892 BRF1Q92994 677 aa20.69■□□□□ 0.9
SEH1L-202ENST00000399892 R3HDMLQ9H3Y0 253 aa20.69■□□□□ 0.9
SEH1L-202ENST00000399892 PPP1R9AQ9ULJ8 1098 aa20.69■□□□□ 0.9
SEH1L-202ENST00000399892 SPDYE16A6NNV3 312 aaPredicted RBP20.68■□□□□ 0.9
SEH1L-202ENST00000399892 FOXN1O15353 648 aa20.68■□□□□ 0.9
SEH1L-202ENST00000399892 GOLGA8HP0CJ92 632 aa20.68■□□□□ 0.9
SEH1L-202ENST00000399892 RBM25P49756 843 aaKnown RBP20.68■□□□□ 0.9
SEH1L-202ENST00000399892 ZNF543Q08ER8 600 aa20.68■□□□□ 0.9
SEH1L-202ENST00000399892 ASPRV1Q53RT3 343 aa20.68■□□□□ 0.9
SEH1L-202ENST00000399892 SGMS1Q86VZ5 419 aa20.68■□□□□ 0.9
SEH1L-202ENST00000399892 CTCFLQ8NI51 663 aaPredicted RBP20.68■□□□□ 0.9
SEH1L-202ENST00000399892 MYPNQ86TC9 1320 aa20.68■□□□□ 0.9
SEH1L-202ENST00000399892 RLFQ13129 1914 aa20.67■□□□□ 0.9
SEH1L-202ENST00000399892 DDAH1O94760 285 aa20.67■□□□□ 0.9
SEH1L-202ENST00000399892 CALM1P0DP23 149 aa20.67■□□□□ 0.9
SEH1L-202ENST00000399892 CALM2P0DP24 149 aa20.67■□□□□ 0.9
SEH1L-202ENST00000399892 CALM3P0DP25 149 aa20.67■□□□□ 0.9
SEH1L-202ENST00000399892 SNHG28P0DPA3 235 aa20.67■□□□□ 0.9
SEH1L-202ENST00000399892 CTCFP49711 727 aaPredicted RBP20.67■□□□□ 0.9
SEH1L-202ENST00000399892 ATG4CQ96DT6 458 aa20.67■□□□□ 0.9
SEH1L-202ENST00000399892 MYL10Q9BUA6 226 aa20.67■□□□□ 0.9
SEH1L-202ENST00000399892 GPR25O00155 361 aa20.67■□□□□ 0.9
SEH1L-202ENST00000399892 MICU3Q86XE3 530 aa20.67■□□□□ 0.9
SEH1L-202ENST00000399892 MB21D1Q8N884 522 aa20.67■□□□□ 0.9
SEH1L-202ENST00000399892 COL11A1P12107 1806 aaPredicted RBP20.66■□□□□ 0.9
SEH1L-202ENST00000399892 KLF18A0A0U1RQI7 1052 aa20.66■□□□□ 0.9
SEH1L-202ENST00000399892 DHX16O60231 1041 aaKnown RBP20.66■□□□□ 0.9
SEH1L-202ENST00000399892 KIF5BP33176 963 aa20.66■□□□□ 0.9
SEH1L-202ENST00000399892 SLC16A2P36021 539 aa20.66■□□□□ 0.9
SEH1L-202ENST00000399892 NEK4P51957 841 aa20.66■□□□□ 0.9
SEH1L-202ENST00000399892 TROAPQ12815 778 aa20.66■□□□□ 0.9
SEH1L-202ENST00000399892 TTBK2Q6IQ55 1244 aa20.66■□□□□ 0.9
SEH1L-202ENST00000399892 C17orf99Q6UX52 265 aa20.66■□□□□ 0.9
SEH1L-202ENST00000399892 ADGRA2Q96PE1 1338 aa20.65■□□□□ 0.9
SEH1L-202ENST00000399892 PLA2G6O60733 806 aa20.65■□□□□ 0.9
SEH1L-202ENST00000399892 SP3Q02447 781 aa20.65■□□□□ 0.9
SEH1L-202ENST00000399892 APOBRQ0VD83 1088 aa20.65■□□□□ 0.9
SEH1L-202ENST00000399892 PLS1Q14651 629 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms