RNA–Protein interactions for RNA: ENST00000398646.3

FAM3B-202, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 5 BASIC

Gene FAM3B, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-202ENST00000398646 CCDC96Q2M329 555 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 SHROOM1Q2M3G4 852 aaPredicted RBP11.29□□□□□ -0.6
FAM3B-202ENST00000398646 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 MIGA2Q7L4E1 593 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 APOBEC3FQ8IUX4 373 aaKnown RBP11.29□□□□□ -0.6
FAM3B-202ENST00000398646 DIS3L2Q8IYB7 885 aaKnown RBP11.29□□□□□ -0.6
FAM3B-202ENST00000398646 REM2Q8IYK8 340 aaPredicted RBP11.29□□□□□ -0.6
FAM3B-202ENST00000398646 GPT2Q8TD30 523 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 LEO1Q8WVC0 666 aaPredicted RBP11.29□□□□□ -0.6
FAM3B-202ENST00000398646 USP28Q96RU2 1077 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 SPZ1Q9BXG8 430 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 ISY1Q9ULR0 285 aaKnown RBP11.29□□□□□ -0.6
FAM3B-202ENST00000398646 SCAF8Q9UPN6 1271 aaKnown RBP11.29□□□□□ -0.6
FAM3B-202ENST00000398646 ASTN2O75129 1339 aaPredicted RBP11.29□□□□□ -0.6
FAM3B-202ENST00000398646 ELP1O95163 1332 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 GOLGA6L4A6NEF3 574 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 BTBD18B2RXH4 712 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 CYTH3O43739 400 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 U2AF2P26368 475 aaKnown RBP eCLIP11.28□□□□□ -0.6
FAM3B-202ENST00000398646 KRT2P35908 639 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 NLRP5P59047 1200 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 GPATCH4Q5T3I0 446 aaKnown RBP11.28□□□□□ -0.6
FAM3B-202ENST00000398646 ANGEL2Q5VTE6 544 aaKnown RBP11.28□□□□□ -0.6
FAM3B-202ENST00000398646 SLFN13Q68D06 897 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 RASGRP2Q7LDG7 609 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 CDAN1Q8IWY9 1227 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
FAM3B-202ENST00000398646 TRPM4Q8TD43 1214 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 DCAF4Q8WV16 495 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 RRP36Q96EU6 259 aaKnown RBP11.28□□□□□ -0.6
FAM3B-202ENST00000398646 PHF20Q9BVI0 1012 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 UBA5Q9GZZ9 404 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 GZF1Q9H116 711 aaPredicted RBP11.28□□□□□ -0.6
FAM3B-202ENST00000398646 DEFB129Q9H1M3 183 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 FOXP1Q9H334 677 aaPredicted RBP11.28□□□□□ -0.6
FAM3B-202ENST00000398646 ARHGEF10LQ9HCE6 1279 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 SH3GLB2Q9NR46 395 aa11.28□□□□□ -0.6
FAM3B-202ENST00000398646 SEC63Q9UGP8 760 aaKnown RBP11.28□□□□□ -0.6
FAM3B-202ENST00000398646 MYH15Q9Y2K3 1946 aa11.27□□□□□ -0.6
FAM3B-202ENST00000398646 MYH4Q9Y623 1939 aa11.27□□□□□ -0.6
FAM3B-202ENST00000398646 GRIN3BO60391 1043 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 CALML3P27482 149 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 CAP2P40123 477 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 JAG1P78504 1218 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 MAP3K10Q02779 954 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 ZNF543Q08ER8 600 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 STK38Q15208 465 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 SLC35G1Q2M3R5 365 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 DCAF15Q66K64 600 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 DPY19L2Q6NUT2 758 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 HOMER1Q86YM7 354 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 SIAH1Q8IUQ4 282 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 NOSTRINQ8IVI9 506 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 CCDC148Q8NFR7 591 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 HOOK2Q96ED9 719 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 TEPSINQ96N21 525 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 CPVLQ9H3G5 476 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 RIOX1Q9H6W3 641 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 RTEL1Q9NZ71 1219 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 RCOR1Q9UKL0 485 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
FAM3B-202ENST00000398646 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
FAM3B-202ENST00000398646 F5H6K3 240 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 YEATS4O95619 227 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 SLC1A4P43007 532 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 PLCB2Q00722 1185 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 KLRC3Q07444 240 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 SF3A1Q15459 793 aaKnown RBP11.26□□□□□ -0.61
FAM3B-202ENST00000398646 ANO1Q5XXA6 986 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 CAVIN1Q6NZI2 390 aaKnown RBP11.26□□□□□ -0.61
FAM3B-202ENST00000398646 KCTD1Q719H9 257 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 HEATR3Q7Z4Q2 680 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 GMCL1P1Q8NEA9 526 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 CCDC12Q8WUD4 166 aaPredicted RBP11.26□□□□□ -0.61
FAM3B-202ENST00000398646 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.61
FAM3B-202ENST00000398646 SYAP1Q96A49 352 aaPredicted RBP11.26□□□□□ -0.61
FAM3B-202ENST00000398646 SHISA4Q96DD7 197 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 PIGSQ96S52 555 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 FTOQ9C0B1 505 aaKnown RBP eCLIP11.26□□□□□ -0.61
FAM3B-202ENST00000398646 ADARB2Q9NS39 739 aaKnown RBP11.26□□□□□ -0.61
FAM3B-202ENST00000398646 GGA3Q9NZ52 723 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 SYNPO2Q9UMS6 1093 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 CLIC4Q9Y696 253 aa11.26□□□□□ -0.61
FAM3B-202ENST00000398646 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
FAM3B-202ENST00000398646 STXBP3O00186 592 aa11.25□□□□□ -0.61
FAM3B-202ENST00000398646 ASNSP08243 561 aa11.25□□□□□ -0.61
FAM3B-202ENST00000398646 VEGFAP15692 232 aaPredicted RBP11.25□□□□□ -0.61
FAM3B-202ENST00000398646 NASPP49321 788 aaPredicted RBP11.25□□□□□ -0.61
FAM3B-202ENST00000398646 HIRAP54198 1017 aaPredicted RBP11.25□□□□□ -0.61
FAM3B-202ENST00000398646 NR5A1Q13285 461 aa11.25□□□□□ -0.61
FAM3B-202ENST00000398646 GSE1Q14687 1217 aa11.25□□□□□ -0.61
FAM3B-202ENST00000398646 NBPF12Q5TAG4 269 aaPredicted RBP11.25□□□□□ -0.61
FAM3B-202ENST00000398646 WWC2Q6AWC2 1192 aa11.25□□□□□ -0.61
FAM3B-202ENST00000398646 TTBK2Q6IQ55 1244 aa11.25□□□□□ -0.61
FAM3B-202ENST00000398646 FAM177A1Q8N128 213 aaPredicted RBP11.25□□□□□ -0.61
FAM3B-202ENST00000398646 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
FAM3B-202ENST00000398646 BICD2Q8TD16 824 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms