RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 EEPD1Q7L9B9 569 aa17.26■□□□□ 0.35
LSS-202ENST00000397728 TECP42680 631 aa17.26■□□□□ 0.35
LSS-202ENST00000397728 SUGCTQ9HAC7 445 aa17.26■□□□□ 0.35
LSS-202ENST00000397728 ADD3Q9UEY8 706 aaKnown RBP17.26■□□□□ 0.35
LSS-202ENST00000397728 SCARF1Q14162 830 aa17.26■□□□□ 0.35
LSS-202ENST00000397728 OTUD6AQ7L8S5 288 aa17.26■□□□□ 0.35
LSS-202ENST00000397728 MROH2AA6NES4 1674 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 SPP2Q13103 211 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 PRPF4BQ13523 1007 aaKnown RBP17.25■□□□□ 0.35
LSS-202ENST00000397728 SYDE2Q5VT97 1194 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 CNNM4Q6P4Q7 775 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 LEO1Q8WVC0 666 aaPredicted RBP17.25■□□□□ 0.35
LSS-202ENST00000397728 PNMA3Q9UL41 463 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 PDIA6Q15084 440 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 PTPN14Q15678 1187 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 SCRN1Q12765 414 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 STRIP1Q5VSL9 837 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 ATG9AQ7Z3C6 839 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 COA7Q96BR5 231 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 TMX1Q9H3N1 280 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 DCP1AQ9NPI6 582 aaPredicted RBP17.25■□□□□ 0.35
LSS-202ENST00000397728 ZHX1Q9UKY1 873 aaPredicted RBP17.25■□□□□ 0.35
LSS-202ENST00000397728 EXOC7Q9UPT5 735 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.25■□□□□ 0.355e-7■■□□□ 13.4
LSS-202ENST00000397728 FMNL1O95466 1100 aaPredicted RBP17.25■□□□□ 0.35
LSS-202ENST00000397728 SEPT2Q15019 361 aa17.25■□□□□ 0.35
LSS-202ENST00000397728 DDX25Q9UHL0 483 aaKnown RBP17.25■□□□□ 0.35
LSS-202ENST00000397728 STYK1Q6J9G0 422 aa17.24■□□□□ 0.35
LSS-202ENST00000397728 KIAA1210Q9ULL0 1709 aa17.24■□□□□ 0.35
LSS-202ENST00000397728 GALNT17Q6IS24 598 aa17.24■□□□□ 0.35
LSS-202ENST00000397728 RNF169Q8NCN4 708 aa17.24■□□□□ 0.35
LSS-202ENST00000397728 RASGRP4Q8TDF6 673 aa17.24■□□□□ 0.35
LSS-202ENST00000397728 DEPDC5O75140 1603 aa17.24■□□□□ 0.35
LSS-202ENST00000397728 PTGS1P23219 599 aa17.24■□□□□ 0.35
LSS-202ENST00000397728 SEPT14Q6ZU15 432 aa17.24■□□□□ 0.35
LSS-202ENST00000397728 NT5C3AQ9H0P0 336 aa17.24■□□□□ 0.35
LSS-202ENST00000397728 EPB41P11171 864 aaKnown RBP17.24■□□□□ 0.35
LSS-202ENST00000397728 XKR9Q5GH70 373 aa17.24■□□□□ 0.35
LSS-202ENST00000397728 IGBP1P78318 339 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 CYP4A11Q02928 519 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 RNF26Q9BY78 433 aaPredicted RBP17.23■□□□□ 0.35
LSS-202ENST00000397728 UBXN1Q04323 297 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 CDAN1Q8IWY9 1227 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 TEKT3Q9BXF9 490 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 CSF1RP07333 972 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 RGS22Q8NE09 1264 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 COL5A2P05997 1499 aaPredicted RBP17.23■□□□□ 0.35
LSS-202ENST00000397728 USP17L5A8MUK1 530 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 GCNT3O95395 438 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 SNAP25P60880 206 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 FAM160B2Q86V87 743 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 NELFCDQ8IXH7 590 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 NEK11Q8NG66 645 aa17.23■□□□□ 0.35
LSS-202ENST00000397728 MRPL44Q9H9J2 332 aaKnown RBP17.23■□□□□ 0.35
LSS-202ENST00000397728 ZNF202O95125 648 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 OR52Z1P0C646 297 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 PGBD1Q96JS3 809 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 MAP7D2Q96T17 732 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 CETN3O15182 167 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 DEPTORQ8TB45 409 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 ALS2CR12Q96Q35 445 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 MXD3Q9BW11 206 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 AP5M1Q9H0R1 490 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 URI1O94763 535 aaPredicted RBP17.22■□□□□ 0.35
LSS-202ENST00000397728 RAPGEF1Q13905 1077 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 RASA3Q14644 834 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 ERCC3P19447 782 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 PAFAH1B1P43034 410 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 TMED8Q6PL24 325 aaPredicted RBP17.22■□□□□ 0.35
LSS-202ENST00000397728 SLFN12Q8IYM2 578 aa17.22■□□□□ 0.35
LSS-202ENST00000397728 RPAP1Q9BWH6 1393 aaPredicted RBP17.21■□□□□ 0.35
LSS-202ENST00000397728 SH2B2O14492 632 aaPredicted RBP17.21■□□□□ 0.35
LSS-202ENST00000397728 TRPC3Q13507 836 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 CDC37Q16543 378 aaPredicted RBP17.21■□□□□ 0.35
LSS-202ENST00000397728 DGKHQ86XP1 1220 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 FBXO18Q8NFZ0 1043 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 CENPHQ9H3R5 247 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 HACL1Q9UJ83 578 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 CTNND2Q9UQB3 1225 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 PPLO60437 1756 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 WDR44Q5JSH3 913 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 FAM102BQ5T8I3 360 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 MTERF4Q7Z6M4 381 aaKnown RBP17.21■□□□□ 0.35
LSS-202ENST00000397728 UTYO14607 1347 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 KIF4AO95239 1232 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 NBPF3Q9H094 633 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 GPBP1L1Q9HC44 474 aaPredicted RBP17.21■□□□□ 0.35
LSS-202ENST00000397728 REREQ9P2R6 1566 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.35
LSS-202ENST00000397728 USP17L10C9JJH3 530 aa17.21■□□□□ 0.34
LSS-202ENST00000397728 EXOC3O60645 756 aa17.21■□□□□ 0.34
LSS-202ENST00000397728 PPP1R2P41236 205 aa17.21■□□□□ 0.34
LSS-202ENST00000397728 SPOUT1Q5T280 376 aaKnown RBP17.21■□□□□ 0.34
LSS-202ENST00000397728 LUZP1Q86V48 1076 aa17.21■□□□□ 0.34
LSS-202ENST00000397728 GMPSP49915 693 aaPredicted RBP17.2■□□□□ 0.34
LSS-202ENST00000397728 UVSSAQ2YD98 709 aa17.2■□□□□ 0.34
LSS-202ENST00000397728 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms