RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 TRIM49BA6NDI0 452 aa20.78■□□□□ 0.92
IFFO1-204ENST00000396840 PP2D1A8MPX8 630 aa20.78■□□□□ 0.92
IFFO1-204ENST00000396840 CALM1P0DP23 149 aa20.78■□□□□ 0.92
IFFO1-204ENST00000396840 CALM2P0DP24 149 aa20.78■□□□□ 0.92
IFFO1-204ENST00000396840 CALM3P0DP25 149 aa20.78■□□□□ 0.92
IFFO1-204ENST00000396840 OAS2P29728 719 aaKnown RBP20.78■□□□□ 0.92
IFFO1-204ENST00000396840 ERVK-24P63145 666 aa20.78■□□□□ 0.92
IFFO1-204ENST00000396840 SLC35F6Q8N357 371 aa20.78■□□□□ 0.92
IFFO1-204ENST00000396840 NSUN4Q96CB9 384 aaKnown RBP20.78■□□□□ 0.92
IFFO1-204ENST00000396840 CACNA1SQ13698 1873 aa20.78■□□□□ 0.92
IFFO1-204ENST00000396840 PDXDC2PQ6P474 469 aa20.78■□□□□ 0.92
IFFO1-204ENST00000396840 DDAH1O94760 285 aa20.77■□□□□ 0.92
IFFO1-204ENST00000396840 BMP15O95972 392 aa20.77■□□□□ 0.92
IFFO1-204ENST00000396840 PAK1Q13153 545 aa20.77■□□□□ 0.92
IFFO1-204ENST00000396840 UBE4AQ14139 1066 aa20.77■□□□□ 0.92
IFFO1-204ENST00000396840 MARCH10Q8NA82 808 aaPredicted RBP20.77■□□□□ 0.92
IFFO1-204ENST00000396840 RABGGTAQ92696 567 aa20.77■□□□□ 0.92
IFFO1-204ENST00000396840 SLF1Q9BQI6 1058 aa20.77■□□□□ 0.92
IFFO1-204ENST00000396840 FAM205AQ6ZU69 1335 aa20.77■□□□□ 0.92
IFFO1-204ENST00000396840 ST5P78524 1137 aa20.77■□□□□ 0.92
IFFO1-204ENST00000396840 SMC1AQ14683 1233 aaKnown RBP20.77■□□□□ 0.92
IFFO1-204ENST00000396840 CNGA4Q8IV77 575 aa20.77■□□□□ 0.92
IFFO1-204ENST00000396840 PHLPP1O60346 1717 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 KCNJ18B7U540 433 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 USP17L8P0C7I0 530 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 RHOXF2BP0C7M4 288 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 TXLNAP40222 546 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 KCNJ12Q14500 433 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 SLC51AQ86UW1 340 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 RHOXF2Q9BQY4 288 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 BSDC1Q9NW68 430 aaPredicted RBP20.76■□□□□ 0.91
IFFO1-204ENST00000396840 MCM9Q9NXL9 1143 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 PRCPP42785 496 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 COPB1P53618 953 aaKnown RBP20.76■□□□□ 0.91
IFFO1-204ENST00000396840 RASGRP2Q7LDG7 609 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 STAG2Q8N3U4 1231 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 NEK11Q8NG66 645 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 NAA15Q9BXJ9 866 aaKnown RBP20.76■□□□□ 0.91
IFFO1-204ENST00000396840 ABHD10Q9NUJ1 306 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 TFR2Q9UP52 801 aa20.76■□□□□ 0.91
IFFO1-204ENST00000396840 STAT6P42226 847 aa20.75■□□□□ 0.91
IFFO1-204ENST00000396840 UBXN1Q04323 297 aa20.75■□□□□ 0.91
IFFO1-204ENST00000396840 SRGAP1Q7Z6B7 1085 aa20.75■□□□□ 0.91
IFFO1-204ENST00000396840 TRIM10Q9UDY6 481 aa20.75■□□□□ 0.91
IFFO1-204ENST00000396840 ZNF652Q9Y2D9 606 aa20.75■□□□□ 0.91
IFFO1-204ENST00000396840 RPN1P04843 607 aaKnown RBP20.75■□□□□ 0.91
IFFO1-204ENST00000396840 KRT9P35527 623 aa20.75■□□□□ 0.91
IFFO1-204ENST00000396840 PFKFB3Q16875 520 aaPredicted RBP20.75■□□□□ 0.91
IFFO1-204ENST00000396840 TCP11X2Q5H9J9 407 aa20.75■□□□□ 0.91
IFFO1-204ENST00000396840 DYNLL2Q96FJ2 89 aa20.75■□□□□ 0.91
IFFO1-204ENST00000396840 CHP1Q99653 195 aa20.75■□□□□ 0.91
IFFO1-204ENST00000396840 CRNKL1Q9BZJ0 848 aaKnown RBP20.75■□□□□ 0.91
IFFO1-204ENST00000396840 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.75■□□□□ 0.91
IFFO1-204ENST00000396840 LONRF2Q1L5Z9 754 aa20.74■□□□□ 0.91
IFFO1-204ENST00000396840 FUT8Q9BYC5 575 aa20.74■□□□□ 0.91
IFFO1-204ENST00000396840 SUGCTQ9HAC7 445 aa20.74■□□□□ 0.91
IFFO1-204ENST00000396840 CTAGE9A4FU28 777 aa20.74■□□□□ 0.91
IFFO1-204ENST00000396840 MCM6Q14566 821 aa20.74■□□□□ 0.91
IFFO1-204ENST00000396840 WWC2Q6AWC2 1192 aa20.74■□□□□ 0.91
IFFO1-204ENST00000396840 TXNRD3Q86VQ6 643 aa20.74■□□□□ 0.91
IFFO1-204ENST00000396840 PNKPQ96T60 521 aa20.74■□□□□ 0.91
IFFO1-204ENST00000396840 CDC23Q9UJX2 597 aa20.74■□□□□ 0.91
IFFO1-204ENST00000396840 GTPBP6O43824 516 aaPredicted RBP20.73■□□□□ 0.91
IFFO1-204ENST00000396840 CYP2C19P33261 490 aa20.73■□□□□ 0.91
IFFO1-204ENST00000396840 PMS1P54277 932 aaKnown RBP20.73■□□□□ 0.91
IFFO1-204ENST00000396840 TFAP4Q01664 338 aa20.73■□□□□ 0.91
IFFO1-204ENST00000396840 TYW1BQ6NUM6 668 aa20.73■□□□□ 0.91
IFFO1-204ENST00000396840 TRERF1Q96PN7 1200 aa20.73■□□□□ 0.91
IFFO1-204ENST00000396840 ANKZF1Q9H8Y5 726 aa20.73■□□□□ 0.91
IFFO1-204ENST00000396840 RWDD2AQ9UIY3 292 aa20.73■□□□□ 0.91
IFFO1-204ENST00000396840 KAT14Q9H8E8 782 aa20.73■□□□□ 0.91
IFFO1-204ENST00000396840 RNF216Q9NWF9 866 aaPredicted RBP20.73■□□□□ 0.91
IFFO1-204ENST00000396840 FGRP09769 529 aa20.72■□□□□ 0.91
IFFO1-204ENST00000396840 ZNF658Q5TYW1 1059 aaPredicted RBP20.72■□□□□ 0.91
IFFO1-204ENST00000396840 RCSD1Q6JBY9 416 aa20.72■□□□□ 0.91
IFFO1-204ENST00000396840 BLIDQ8IZY5 108 aa20.72■□□□□ 0.91
IFFO1-204ENST00000396840 CPVLQ9H3G5 476 aa20.72■□□□□ 0.91
IFFO1-204ENST00000396840 LIMA1Q9UHB6 759 aaKnown RBP20.72■□□□□ 0.91
IFFO1-204ENST00000396840 CT47A1Q5JQC4 288 aaPredicted RBP20.72■□□□□ 0.91
IFFO1-204ENST00000396840 TBC1D9BQ66K14 1250 aa20.72■□□□□ 0.91
IFFO1-204ENST00000396840 ANKRD20A12PQ8NF67 263 aa20.72■□□□□ 0.91
IFFO1-204ENST00000396840 GUCA1BQ9UMX6 200 aa20.72■□□□□ 0.91
IFFO1-204ENST00000396840 CCDC66A2RUB6 948 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 USP17L3A6NCW0 530 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 USP17L4A6NCW7 530 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 SEMA3EO15041 775 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 HIBADHP31937 336 aaKnown RBP20.71■□□□□ 0.91
IFFO1-204ENST00000396840 USP17L1Q7RTZ2 530 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 TMEM60Q9H2L4 133 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.71■□□□□ 0.91
IFFO1-204ENST00000396840 INF2Q27J81 1249 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 ENC1O14682 589 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 ZBTB22O15209 634 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 ORC4O43929 436 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 GOLGA8HP0CJ92 632 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 NCAPH2Q6IBW4 605 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 HEATR3Q7Z4Q2 680 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 TMTC1Q8IUR5 882 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 PNMA1Q8ND90 353 aa20.71■□□□□ 0.91
IFFO1-204ENST00000396840 PARP1P09874 1014 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms