RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 PPP1R13BQ96KQ4 1090 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 GTPBP4Q9BZE4 634 aaKnown RBP16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 CCDC113Q9H0I3 377 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 TBC1D7Q9P0N9 293 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 CDC27P30260 824 aa16.46■□□□□ 0.22
SFMBT1-201ENST00000394752 HINFPQ9BQA5 517 aa16.46■□□□□ 0.22
SFMBT1-201ENST00000394752 MCM3P25205 808 aa16.45■□□□□ 0.22
SFMBT1-201ENST00000394752 XDHP47989 1333 aa16.45■□□□□ 0.22
SFMBT1-201ENST00000394752 BICDL2A1A5D9 508 aa16.45■□□□□ 0.22
SFMBT1-201ENST00000394752 TBCAO75347 108 aaKnown RBP16.45■□□□□ 0.22
SFMBT1-201ENST00000394752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.45■□□□□ 0.22
SFMBT1-201ENST00000394752 USP27XA6NNY8 438 aa16.45■□□□□ 0.22
SFMBT1-201ENST00000394752 PLCD1P51178 756 aa16.45■□□□□ 0.22
SFMBT1-201ENST00000394752 PPARDQ03181 441 aa16.45■□□□□ 0.22
SFMBT1-201ENST00000394752 SV2BQ7L1I2 683 aa16.45■□□□□ 0.22
SFMBT1-201ENST00000394752 SYCP3Q8IZU3 236 aa16.45■□□□□ 0.22
SFMBT1-201ENST00000394752 SCG2P13521 617 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 FMR1NBQ8N0W7 255 aaPredicted RBP16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 NAPGQ99747 312 aaPredicted RBP16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 GOPCQ9HD26 462 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 LEMD3Q9Y2U8 911 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 PPP6R2O75170 966 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 COL9A3Q14050 684 aaPredicted RBP16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 VPS72Q15906 364 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 MFSD14BQ5SR56 506 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 MAATS1Q7Z4T9 603 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 NEK11Q8NG66 645 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 FAM207AQ9NSI2 230 aaPredicted RBP16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 PNPLA7Q6ZV29 1317 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 DDAH1O94760 285 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 MMP1P03956 469 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 NONOQ15233 471 aaKnown RBP eCLIP16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 BLIDQ8IZY5 108 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 ARHGEF1Q92888 912 aaKnown RBP16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 RNF26Q9BY78 433 aaPredicted RBP16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 BIN2Q9UBW5 565 aaPredicted RBP16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 LRWD1Q9UFC0 647 aa16.44■□□□□ 0.22
SFMBT1-201ENST00000394752 KIF28PB7ZC32 967 aa16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 IBSPP21815 317 aaPredicted RBP16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 CKAP4Q07065 602 aaKnown RBP16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 CERS3Q8IU89 383 aa16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 KCNF1Q9H3M0 494 aa16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 RSPH14Q9UHP6 348 aa16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 PARP3Q9Y6F1 533 aa16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 RGPD5Q99666 1765 aa16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 CYP26C1Q6V0L0 522 aa16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 FAM84BQ96KN1 310 aaPredicted RBP16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 FOXP1Q9H334 677 aaPredicted RBP16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 PRDX5P30044 214 aa16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 SF3B3Q15393 1217 aaKnown RBP16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 TIGD1Q96MW7 591 aa16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 BRIP1Q9BX63 1249 aa16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 PLEKHA4Q9H4M7 779 aa16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 EPB41L4AQ9HCS5 686 aaPredicted RBP16.43■□□□□ 0.22
SFMBT1-201ENST00000394752 ATP2B4P23634 1241 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 TCP10Q12799 353 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 TMTC1Q8IUR5 882 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 CABP7Q86V35 215 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 SGMS1Q86VZ5 419 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 FCHSD1Q86WN1 690 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 SNX29Q8TEQ0 813 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 MAN1B1Q9UKM7 699 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 SMCO2A6NFE2 343 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 CASP14P31944 242 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 GRAPQ13588 217 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 PLS1Q14651 629 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 GRAPLQ8TC17 118 aaPredicted RBP16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 TTF2Q9UNY4 1162 aaKnown RBP16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 KLRF2D3W0D1 207 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 PLEKHA8P1O95397 391 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 FDPSP14324 419 aaKnown RBP16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 FGFR2P21802 821 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 TECP42680 631 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 IFFO1Q0D2I5 559 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 NELFCDQ8IXH7 590 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 SEPT12Q8IYM1 358 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 LRRC27Q9C0I9 530 aa16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 TRPM3Q9HCF6 1732 aaPredicted RBP16.42■□□□□ 0.22
SFMBT1-201ENST00000394752 FOXN1O15353 648 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 TBC1D22AQ8WUA7 517 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 EYA3Q99504 573 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 SHTN1A0MZ66 631 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 SPDYE3A6NKU9 549 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 SERPINB2P05120 415 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 RAPGEF1Q13905 1077 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 DCAF17Q5H9S7 520 aaPredicted RBP16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 OXER1Q8TDS5 423 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 IFT81Q8WYA0 676 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 NLRC4Q9NPP4 1024 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 TMEM232C9JQI7 657 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 SPATA1Q5VX52 437 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 NAA15Q9BXJ9 866 aaKnown RBP16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 RABEP2Q9H5N1 569 aa16.41■□□□□ 0.22
SFMBT1-201ENST00000394752 KCNJ18B7U540 433 aa16.4■□□□□ 0.22
SFMBT1-201ENST00000394752 IKBKBO14920 756 aa16.4■□□□□ 0.22
SFMBT1-201ENST00000394752 BTDP43251 543 aa16.4■□□□□ 0.22
SFMBT1-201ENST00000394752 GTF2IP78347 998 aa16.4■□□□□ 0.22
SFMBT1-201ENST00000394752 MORC3Q14149 939 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms