RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 GJA3Q9Y6H8 435 aa6.39□□□□□ -1.39
RFFL-202ENST00000394597 RBBP5Q15291 538 aaKnown RBP6.38□□□□□ -1.39
RFFL-202ENST00000394597 TTLL6Q8N841 843 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 DBNDD1Q9H9R9 158 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 ZNF609O15014 1411 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 PRDX5P30044 214 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 BRD3Q15059 726 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 DIXDC1Q155Q3 683 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 CEP85LQ5SZL2 805 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 CCDC121Q6ZUS5 278 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 DIS3L2Q8IYB7 885 aaKnown RBP6.38□□□□□ -1.39
RFFL-202ENST00000394597 TTC14Q96N46 770 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 ALDH8A1Q9H2A2 487 aaPredicted RBP6.38□□□□□ -1.39
RFFL-202ENST00000394597 BCS1LQ9Y276 419 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 COL14A1Q05707 1796 aaKnown RBP6.38□□□□□ -1.39
RFFL-202ENST00000394597 TUBBP07437 444 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 GYS1P13807 737 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 CCT5P48643 541 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 TUBB4BP68371 445 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 TTLL12Q14166 644 aaPredicted RBP6.38□□□□□ -1.39
RFFL-202ENST00000394597 LONRF2Q1L5Z9 754 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 CCDC93Q567U6 631 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 ANO1Q5XXA6 986 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 APOA5Q6Q788 366 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 RTKN2Q8IZC4 609 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 LEO1Q8WVC0 666 aaPredicted RBP6.38□□□□□ -1.39
RFFL-202ENST00000394597 GPCPD1Q9NPB8 672 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 LZTFL1Q9NQ48 299 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 FAN1Q9Y2M0 1017 aa6.38□□□□□ -1.39
RFFL-202ENST00000394597 SH2B2O14492 632 aaPredicted RBP6.37□□□□□ -1.39
RFFL-202ENST00000394597 LIFRP42702 1097 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 NT5C2P49902 561 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 TNIP1Q15025 636 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 FBXO33Q7Z6M2 555 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 CALML4Q96GE6 196 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 ZHX3Q9H4I2 956 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.37□□□□□ -1.39
RFFL-202ENST00000394597 DDAH1O94760 285 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 LARGE1O95461 756 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 TOB2Q14106 344 aaPredicted RBP6.37□□□□□ -1.39
RFFL-202ENST00000394597 PODNQ7Z5L7 613 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 NSUN7Q8NE18 718 aaKnown RBP6.37□□□□□ -1.39
RFFL-202ENST00000394597 BCAS4Q8TDM0 211 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 STAG1Q8WVM7 1258 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 CABS1Q96KC9 395 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 CLSTN2Q9H4D0 955 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 ATF5Q9Y2D1 282 aaPredicted RBP6.37□□□□□ -1.39
RFFL-202ENST00000394597 PHLPP1O60346 1717 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 ROBO1Q9Y6N7 1651 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 MRC1P22897 1456 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 USP17L3A6NCW0 530 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 USP17L4A6NCW7 530 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 GSG1L2A8MUP6 293 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 KIF4AO95239 1232 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 ARHGAP25P42331 645 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 GRIPAP1Q4V328 841 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 USP17L1Q7RTZ2 530 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 KRI1Q8N9T8 703 aaKnown RBP6.37□□□□□ -1.39
RFFL-202ENST00000394597 PNMA1Q8ND90 353 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 MICAL1Q8TDZ2 1067 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 TRIM6Q9C030 488 aaPredicted RBP6.37□□□□□ -1.39
RFFL-202ENST00000394597 SH2D4AQ9H788 454 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 ARHGEF10LQ9HCE6 1279 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 ZDHHC9Q9Y397 364 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 PNPLA7Q6ZV29 1317 aa6.37□□□□□ -1.39
RFFL-202ENST00000394597 CTAGE9A4FU28 777 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 GOLGA6CA6NDK9 693 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 CHGBP05060 677 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 CCDC175P0C221 793 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 USP17L8P0C7I0 530 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 GOLGA6DP0CG33 693 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 FGFR2P21802 821 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 AMPD3Q01432 767 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 HSP90AA4PQ58FG1 418 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 TBC1D16Q8TBP0 767 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 MRFAP1L1Q96HT8 127 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 IL25Q9H293 177 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 FAM204AQ9H8W3 233 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 GOLGA6AQ9NYA3 693 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 DONSONQ9NYP3 566 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 IMPACTQ9P2X3 320 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 ATP6V0A2Q9Y487 856 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 WDR19Q8NEZ3 1342 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 CYP2D7A0A087X1C5 515 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 C21orf2O43822 256 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 OPA1O60313 960 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 PPFIA4O75335 1185 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 MRPL12P52815 198 aaKnown RBP6.36□□□□□ -1.39
RFFL-202ENST00000394597 SWAP70Q9UH65 585 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 KCNJ14Q9UNX9 436 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 RGPD1P0DJD0 1748 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 PARP4Q9UKK3 1724 aaKnown RBP6.36□□□□□ -1.39
RFFL-202ENST00000394597 TULP2O00295 520 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 SLC1A4P43007 532 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 ARID5BQ14865 1188 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 ZNF174Q15697 407 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 ZNF569Q5MCW4 686 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 CMTR1Q8N1G2 835 aaKnown RBP6.36□□□□□ -1.39
RFFL-202ENST00000394597 FAM71BQ8TC56 605 aa6.36□□□□□ -1.39
RFFL-202ENST00000394597 SH3RF3Q8TEJ3 882 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 1298.5 ms