RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 ZBTB43O43298 467 aa22.58■■□□□ 1.21
PSEN1-203ENST00000394157 RAD21O60216 631 aa22.58■■□□□ 1.21
PSEN1-203ENST00000394157 BMP3P12645 472 aa22.58■■□□□ 1.21
PSEN1-203ENST00000394157 VCAM1P19320 739 aa22.58■■□□□ 1.21
PSEN1-203ENST00000394157 MAP2K2P36507 400 aa22.58■■□□□ 1.21
PSEN1-203ENST00000394157 APOBRQ0VD83 1088 aa22.58■■□□□ 1.21
PSEN1-203ENST00000394157 MKRN3Q13064 507 aaKnown RBP22.58■■□□□ 1.21
PSEN1-203ENST00000394157 MOGSQ13724 837 aa22.58■■□□□ 1.21
PSEN1-203ENST00000394157 ASPRV1Q53RT3 343 aa22.58■■□□□ 1.21
PSEN1-203ENST00000394157 GADL1Q6ZQY3 521 aa22.58■■□□□ 1.21
PSEN1-203ENST00000394157 BRPF3Q9ULD4 1205 aa22.58■■□□□ 1.21
PSEN1-203ENST00000394157 AGTPBP1Q9UPW5 1226 aa22.58■■□□□ 1.21
PSEN1-203ENST00000394157 WDR33Q9C0J8 1336 aaKnown RBP22.57■■□□□ 1.2
PSEN1-203ENST00000394157 PLA2G6O60733 806 aa22.57■■□□□ 1.2
PSEN1-203ENST00000394157 PARP1P09874 1014 aaKnown RBP22.57■■□□□ 1.2
PSEN1-203ENST00000394157 HOXA7P31268 230 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-203ENST00000394157 KIF5BP33176 963 aa22.57■■□□□ 1.2
PSEN1-203ENST00000394157 ANKRD23Q86SG2 305 aa22.57■■□□□ 1.2
PSEN1-203ENST00000394157 SPICE1Q8N0Z3 855 aa22.57■■□□□ 1.2
PSEN1-203ENST00000394157 CTCFLQ8NI51 663 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-203ENST00000394157 BRI3BPQ8WY22 251 aa22.57■■□□□ 1.2
PSEN1-203ENST00000394157 LIMCH1Q9UPQ0 1083 aa22.57■■□□□ 1.2
PSEN1-203ENST00000394157 NID2Q14112 1375 aa22.57■■□□□ 1.2
PSEN1-203ENST00000394157 CCDC196A0A1B0GTZ2 297 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 USP17L15C9J2P7 530 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 USP17L13C9JLJ4 530 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 USP17L11C9JVI0 530 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 USP17L18D6R9N7 530 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 USP17L22D6RA61 530 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 USP17L17D6RBQ6 530 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 USP17L19D6RCP7 530 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 USP17L20D6RJB6 530 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 TM4SF4P48230 202 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 GNAQP50148 359 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 ZNF543Q08ER8 600 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 USP17L24Q0WX57 530 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 GRM4Q14833 912 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 KIAA1755Q5JYT7 1200 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 OTUD7BQ6GQQ9 843 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 FANCBQ8NB91 859 aa22.56■■□□□ 1.2
PSEN1-203ENST00000394157 ZSCAN31Q96LW9 406 aaPredicted RBP22.56■■□□□ 1.2
PSEN1-203ENST00000394157 GOLGA8BA8MQT2 603 aa22.55■■□□□ 1.2
PSEN1-203ENST00000394157 PDIA3P30101 505 aaKnown RBP22.55■■□□□ 1.2
PSEN1-203ENST00000394157 VEGFBP49765 207 aa22.55■■□□□ 1.2
PSEN1-203ENST00000394157 KIF23Q02241 960 aaPredicted RBP22.55■■□□□ 1.2
PSEN1-203ENST00000394157 CCDC96Q2M329 555 aa22.55■■□□□ 1.2
PSEN1-203ENST00000394157 MICU3Q86XE3 530 aa22.55■■□□□ 1.2
PSEN1-203ENST00000394157 CHURC1Q8WUH1 139 aa22.55■■□□□ 1.2
PSEN1-203ENST00000394157 NUP133Q8WUM0 1156 aa22.55■■□□□ 1.2
PSEN1-203ENST00000394157 CHMP4CQ96CF2 233 aa22.55■■□□□ 1.2
PSEN1-203ENST00000394157 LZTS2Q9BRK4 669 aa22.55■■□□□ 1.2
PSEN1-203ENST00000394157 RPAP3Q9H6T3 665 aaPredicted RBP22.55■■□□□ 1.2
PSEN1-203ENST00000394157 RBM28Q9NW13 759 aaKnown RBP22.55■■□□□ 1.2
PSEN1-203ENST00000394157 FEM1BQ9UK73 627 aa22.55■■□□□ 1.2
PSEN1-203ENST00000394157 MYPNQ86TC9 1320 aa22.55■■□□□ 1.2
PSEN1-203ENST00000394157 PALM3A6NDB9 673 aaPredicted RBP22.54■■□□□ 1.2
PSEN1-203ENST00000394157 METAP2P50579 478 aaKnown RBP eCLIP22.54■■□□□ 1.2
PSEN1-203ENST00000394157 GRM1Q13255 1194 aa22.54■■□□□ 1.2
PSEN1-203ENST00000394157 FAM83BQ5T0W9 1011 aa22.54■■□□□ 1.2
PSEN1-203ENST00000394157 GPAT2Q6NUI2 795 aa22.54■■□□□ 1.2
PSEN1-203ENST00000394157 CATSPERGQ6ZRH7 1159 aa22.54■■□□□ 1.2
PSEN1-203ENST00000394157 FAM160B2Q86V87 743 aa22.54■■□□□ 1.2
PSEN1-203ENST00000394157 SH2B1Q9NRF2 756 aaPredicted RBP22.54■■□□□ 1.2
PSEN1-203ENST00000394157 PNMA3Q9UL41 463 aa22.54■■□□□ 1.2
PSEN1-203ENST00000394157 TPCN1Q9ULQ1 816 aa22.54■■□□□ 1.2
PSEN1-203ENST00000394157 NAP1L2Q9ULW6 460 aaPredicted RBP22.54■■□□□ 1.2
PSEN1-203ENST00000394157 MTMR7Q9Y216 660 aa22.54■■□□□ 1.2
PSEN1-203ENST00000394157 GOLGA8AA7E2F4 631 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 OSBPP22059 807 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 SMARCA1P28370 1054 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 HTRA3P83110 453 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 DGKZQ13574 1117 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 TREML2Q5T2D2 321 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 BTNL9Q6UXG8 535 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 MYL10Q9BUA6 226 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 TANGO6Q9C0B7 1094 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 MAD2L2Q9UI95 211 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 HPS5Q9UPZ3 1129 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 THSD7BQ9C0I4 1608 aa22.53■■□□□ 1.2
PSEN1-203ENST00000394157 BTBD19C9JJ37 291 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 TMEM232C9JQI7 657 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 DHX16O60231 1041 aaKnown RBP22.52■■□□□ 1.2
PSEN1-203ENST00000394157 PFKFB2O60825 505 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 ALDH1A1P00352 501 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 FDX1P10109 184 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 STAT2P52630 851 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 COG2Q14746 738 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 RTN1Q16799 776 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 KCTD1Q719H9 257 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 IFNL1Q8IU54 200 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 SNX21Q969T3 373 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 NUP88Q99567 741 aaPredicted RBP22.52■■□□□ 1.2
PSEN1-203ENST00000394157 PTPN18Q99952 460 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 SLKQ9H2G2 1235 aaPredicted RBP22.52■■□□□ 1.2
PSEN1-203ENST00000394157 HOXC10Q9NYD6 342 aa22.52■■□□□ 1.2
PSEN1-203ENST00000394157 PDHXO00330 501 aa22.51■■□□□ 1.19
PSEN1-203ENST00000394157 IRX3P78415 501 aaPredicted RBP22.51■■□□□ 1.19
PSEN1-203ENST00000394157 PRPF38AQ8NAV1 312 aaKnown RBP22.51■■□□□ 1.19
PSEN1-203ENST00000394157 GTF3C2Q8WUA4 911 aaPredicted RBP22.51■■□□□ 1.19
PSEN1-203ENST00000394157 SLF1Q9BQI6 1058 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms