RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TRIM43Q96BQ3 446 aaPredicted RBP18.58■□□□□ 0.56
CHMP3-202ENST00000393773 SLC5A4Q9NY91 659 aa18.58■□□□□ 0.56
CHMP3-202ENST00000393773 PRKAB2O43741 272 aa18.57■□□□□ 0.56
CHMP3-202ENST00000393773 MBD4O95243 580 aa18.57■□□□□ 0.56
CHMP3-202ENST00000393773 ADD2P35612 726 aa18.57■□□□□ 0.56
CHMP3-202ENST00000393773 SH2D4AQ9H788 454 aa18.57■□□□□ 0.56
CHMP3-202ENST00000393773 ADAMTS5Q9UNA0 930 aa18.57■□□□□ 0.56
CHMP3-202ENST00000393773 PHF24Q9UPV7 400 aa18.57■□□□□ 0.56
CHMP3-202ENST00000393773 CHD9Q3L8U1 2897 aa18.57■□□□□ 0.56
CHMP3-202ENST00000393773 LRRC37A2A6NM11 1700 aa18.57■□□□□ 0.56
CHMP3-202ENST00000393773 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
CHMP3-202ENST00000393773 CYP2D7A0A087X1C5 515 aa18.56■□□□□ 0.56
CHMP3-202ENST00000393773 FCER1AP12319 257 aa18.56■□□□□ 0.56
CHMP3-202ENST00000393773 CLASRPQ8N2M8 674 aaKnown RBP18.56■□□□□ 0.56
CHMP3-202ENST00000393773 FERMT2Q96AC1 680 aa18.56■□□□□ 0.56
CHMP3-202ENST00000393773 KIF1BPQ96EK5 621 aa18.56■□□□□ 0.56
CHMP3-202ENST00000393773 CDX2Q99626 313 aaPredicted RBP18.56■□□□□ 0.56
CHMP3-202ENST00000393773 NRBP1Q9UHY1 535 aa18.56■□□□□ 0.56
CHMP3-202ENST00000393773 SLC25A27O95847 323 aa18.55■□□□□ 0.56
CHMP3-202ENST00000393773 MYCNP04198 464 aaPredicted RBP18.55■□□□□ 0.56
CHMP3-202ENST00000393773 SMAD3P84022 425 aaKnown RBP18.55■□□□□ 0.56
CHMP3-202ENST00000393773 C12orf60Q5U649 245 aa18.55■□□□□ 0.56
CHMP3-202ENST00000393773 C16orf86Q6ZW13 317 aa18.55■□□□□ 0.56
CHMP3-202ENST00000393773 REPS2Q8NFH8 660 aa18.55■□□□□ 0.56
CHMP3-202ENST00000393773 TTYH1Q9H313 450 aaPredicted RBP18.55■□□□□ 0.56
CHMP3-202ENST00000393773 XPNPEP3Q9NQH7 507 aa18.55■□□□□ 0.56
CHMP3-202ENST00000393773 ATP8A2Q9NTI2 1148 aa18.55■□□□□ 0.56
CHMP3-202ENST00000393773 FBXO28Q9NVF7 368 aa18.55■□□□□ 0.56
CHMP3-202ENST00000393773 PAG1Q9NWQ8 432 aa18.55■□□□□ 0.56
CHMP3-202ENST00000393773 ZNF214Q9UL59 606 aaPredicted RBP18.55■□□□□ 0.56
CHMP3-202ENST00000393773 MUC3AQ02505 3323 aa18.55■□□□□ 0.56
CHMP3-202ENST00000393773 TTC28Q96AY4 2481 aa18.55■□□□□ 0.56
CHMP3-202ENST00000393773 APBB1O00213 710 aa18.54■□□□□ 0.56
CHMP3-202ENST00000393773 CHGBP05060 677 aa18.54■□□□□ 0.56
CHMP3-202ENST00000393773 PGK2P07205 417 aa18.54■□□□□ 0.56
CHMP3-202ENST00000393773 IFIT2P09913 472 aaKnown RBP18.54■□□□□ 0.56
CHMP3-202ENST00000393773 ITGB8P26012 769 aa18.54■□□□□ 0.56
CHMP3-202ENST00000393773 CDK8P49336 464 aa18.54■□□□□ 0.56
CHMP3-202ENST00000393773 HNRNPUQ00839 825 aaKnown RBP eCLIP18.54■□□□□ 0.56
CHMP3-202ENST00000393773 TLE2Q04725 743 aa18.54■□□□□ 0.56
CHMP3-202ENST00000393773 RIOX2Q8IUF8 465 aa18.54■□□□□ 0.56
CHMP3-202ENST00000393773 SIRT2Q8IXJ6 389 aa18.54■□□□□ 0.56
CHMP3-202ENST00000393773 CCDC17Q96LX7 622 aa18.54■□□□□ 0.56
CHMP3-202ENST00000393773 MMP19Q99542 508 aa18.54■□□□□ 0.56
CHMP3-202ENST00000393773 SEMA6BQ9H3T3 888 aa18.54■□□□□ 0.56
CHMP3-202ENST00000393773 A0A1W2PQ45 241 aaPredicted RBP18.53■□□□□ 0.56
CHMP3-202ENST00000393773 A0A1W2PQY0 241 aa18.53■□□□□ 0.56
CHMP3-202ENST00000393773 RARBP10826 455 aa18.53■□□□□ 0.56
CHMP3-202ENST00000393773 EEF2P13639 858 aaKnown RBP18.53■□□□□ 0.56
CHMP3-202ENST00000393773 TAL1P17542 331 aaPredicted RBP18.53■□□□□ 0.56
CHMP3-202ENST00000393773 ZNF792Q3KQV3 632 aa18.53■□□□□ 0.56
CHMP3-202ENST00000393773 SAMD1Q6SPF0 538 aaPredicted RBP18.53■□□□□ 0.56
CHMP3-202ENST00000393773 MAFAQ8NHW3 353 aaPredicted RBP18.53■□□□□ 0.56
CHMP3-202ENST00000393773 GBF1Q92538 1859 aa18.53■□□□□ 0.56
CHMP3-202ENST00000393773 LENG1Q96BZ8 264 aaPredicted RBP18.53■□□□□ 0.56
CHMP3-202ENST00000393773 TINF2Q9BSI4 451 aa18.53■□□□□ 0.56
CHMP3-202ENST00000393773 PPP1R9AQ9ULJ8 1098 aa18.53■□□□□ 0.56
CHMP3-202ENST00000393773 VWA5AO00534 786 aa18.52■□□□□ 0.56
CHMP3-202ENST00000393773 CLTBP09497 229 aa18.52■□□□□ 0.56
CHMP3-202ENST00000393773 ZNF865P0CJ78 1059 aaPredicted RBP18.52■□□□□ 0.56
CHMP3-202ENST00000393773 EPHB4P54760 987 aa18.52■□□□□ 0.56
CHMP3-202ENST00000393773 DIS3Q9Y2L1 958 aaKnown RBP18.52■□□□□ 0.56
CHMP3-202ENST00000393773 USP17L12C9JPN9 530 aa18.51■□□□□ 0.55
CHMP3-202ENST00000393773 USP17L21D6R901 530 aa18.51■□□□□ 0.55
CHMP3-202ENST00000393773 KIAA0355O15063 1070 aa18.51■□□□□ 0.55
CHMP3-202ENST00000393773 ADAMTS4O75173 837 aa18.51■□□□□ 0.55
CHMP3-202ENST00000393773 PGK1P00558 417 aa18.51■□□□□ 0.55
CHMP3-202ENST00000393773 MYLIPQ8WY64 445 aa18.51■□□□□ 0.55
CHMP3-202ENST00000393773 HAUS7Q99871 368 aa18.51■□□□□ 0.55
CHMP3-202ENST00000393773 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.51■□□□□ 0.55
CHMP3-202ENST00000393773 BOLA2Q9H3K6 86 aa18.51■□□□□ 0.55
CHMP3-202ENST00000393773 AKR1A1P14550 325 aa18.5■□□□□ 0.55
CHMP3-202ENST00000393773 ATP5JP18859 108 aa18.5■□□□□ 0.55
CHMP3-202ENST00000393773 COPB2P35606 906 aa18.5■□□□□ 0.55
CHMP3-202ENST00000393773 KCTD2Q14681 263 aa18.5■□□□□ 0.55
CHMP3-202ENST00000393773 UBE3CQ15386 1083 aa18.5■□□□□ 0.55
CHMP3-202ENST00000393773 FAM83BQ5T0W9 1011 aa18.5■□□□□ 0.55
CHMP3-202ENST00000393773 RNF180Q86T96 592 aa18.5■□□□□ 0.55
CHMP3-202ENST00000393773 RPAP2Q8IXW5 612 aaPredicted RBP18.5■□□□□ 0.55
CHMP3-202ENST00000393773 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.5■□□□□ 0.55
CHMP3-202ENST00000393773 KANSL2Q9H9L4 492 aa18.5■□□□□ 0.55
CHMP3-202ENST00000393773 GOPCQ9HD26 462 aa18.5■□□□□ 0.55
CHMP3-202ENST00000393773 SYNRGQ9UMZ2 1314 aa18.49■□□□□ 0.55
CHMP3-202ENST00000393773 CHD7Q9P2D1 2997 aa18.49■□□□□ 0.55
CHMP3-202ENST00000393773 LCTP09848 1927 aa18.49■□□□□ 0.55
CHMP3-202ENST00000393773 TMEM265A0A087WTH1 108 aa18.49■□□□□ 0.55
CHMP3-202ENST00000393773 PQBP1O60828 265 aaKnown RBP18.49■□□□□ 0.55
CHMP3-202ENST00000393773 STAT3P40763 770 aa18.49■□□□□ 0.55
CHMP3-202ENST00000393773 CTR9Q6PD62 1173 aa18.49■□□□□ 0.55
CHMP3-202ENST00000393773 AMOTL1Q8IY63 956 aa18.49■□□□□ 0.55
CHMP3-202ENST00000393773 RNPC3Q96LT9 517 aaKnown RBP18.49■□□□□ 0.55
CHMP3-202ENST00000393773 ZBTB40Q9NUA8 1239 aa18.49■□□□□ 0.55
CHMP3-202ENST00000393773 TACC3Q9Y6A5 838 aa18.49■□□□□ 0.55
CHMP3-202ENST00000393773 RAB11FIP3O75154 756 aa18.48■□□□□ 0.55
CHMP3-202ENST00000393773 HMMRO75330 724 aa18.48■□□□□ 0.55
CHMP3-202ENST00000393773 PUS7LQ9H0K6 701 aaKnown RBP18.48■□□□□ 0.55
CHMP3-202ENST00000393773 ARPP21Q9UBL0 812 aaPredicted RBP18.48■□□□□ 0.55
CHMP3-202ENST00000393773 SLC4A4Q9Y6R1 1079 aa18.48■□□□□ 0.55
CHMP3-202ENST00000393773 SYNGAP1Q96PV0 1343 aa18.48■□□□□ 0.55
CHMP3-202ENST00000393773 REV3LO60673 3130 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms