RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 SYMPKQ92797 1274 aaKnown RBP10.32□□□□□ -0.76
TDP1-202ENST00000393452 SMARCE1Q969G3 411 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 SPZ1Q9BXG8 430 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 PCDHA4Q9UN74 947 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 STX8Q9UNK0 236 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 ATP1A3P13637 1013 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 SMARCA1P28370 1054 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 CCZ1BP86790 482 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 CCZ1P86791 482 aaPredicted RBP10.32□□□□□ -0.76
TDP1-202ENST00000393452 ARL6IP4Q66PJ3 421 aaKnown RBP10.32□□□□□ -0.76
TDP1-202ENST00000393452 POTEAQ6S8J7 498 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 FILIP1Q7Z7B0 1213 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 CERS5Q8N5B7 392 aa10.32□□□□□ -0.76
TDP1-202ENST00000393452 UQCRHLA0A096LP55 91 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 SMC2O95347 1197 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 UQCRHP07919 91 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 ALDH1B1P30837 517 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 GABPAQ06546 454 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 DHX8Q14562 1220 aaKnown RBP10.31□□□□□ -0.76
TDP1-202ENST00000393452 WWC2Q6AWC2 1192 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 C4orf32Q8N8J7 132 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 FLAD1Q8NFF5 587 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 CCDC148Q8NFR7 591 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 MYRIPQ8NFW9 859 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 GPKOWQ92917 476 aaPredicted RBP eCLIP10.31□□□□□ -0.762e-6■■■□□ 15.9
TDP1-202ENST00000393452 CCDC34Q96HJ3 373 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 KCND1Q9NSA2 647 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 BARHL2Q9NY43 387 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 MYH8P13535 1937 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 KLRF2D3W0D1 207 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 STXBP3O00186 592 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 TOP1P11387 765 aaKnown RBP10.31□□□□□ -0.76
TDP1-202ENST00000393452 SKILP12757 684 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 PDE6BP35913 854 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 E2F4Q16254 413 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 CT47A1Q5JQC4 288 aaPredicted RBP10.31□□□□□ -0.76
TDP1-202ENST00000393452 GRAMD1CQ8IYS0 662 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 ENOX1Q8TC92 643 aaKnown RBP10.31□□□□□ -0.76
TDP1-202ENST00000393452 DHX58Q96C10 678 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 ZC3H12CQ9C0D7 883 aaKnown RBP10.31□□□□□ -0.76
TDP1-202ENST00000393452 FANCLQ9NW38 375 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 DACH1Q9UI36 760 aa10.31□□□□□ -0.76
TDP1-202ENST00000393452 VWA3AA6NCI4 1184 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 RIMBP2O15034 1052 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 GTF2F1P35269 517 aaKnown RBP eCLIP10.3□□□□□ -0.76
TDP1-202ENST00000393452 IL17AQ16552 155 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 CEP95Q96GE4 821 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 PAGE5Q96GU1 130 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 DYNC1I1O14576 645 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 CBFA2T2O43439 604 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 ZNF18P17022 549 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 ERCC5P28715 1186 aaPredicted RBP10.3□□□□□ -0.76
TDP1-202ENST00000393452 MCM7P33993 719 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 DPYDQ12882 1025 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 CCDC150Q8NCX0 1101 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 MASTLQ96GX5 879 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 GSDMAQ96QA5 445 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 MED15Q96RN5 788 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 PYM1Q9BRP8 204 aaKnown RBP10.3□□□□□ -0.76
TDP1-202ENST00000393452 ZMYND12Q9H0C1 365 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 PCDHA6Q9UN73 950 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 PCDHA8Q9Y5H6 950 aa10.3□□□□□ -0.76
TDP1-202ENST00000393452 C10orf71Q711Q0 1435 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 MMP10P09238 476 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 PARP1P09874 1014 aaKnown RBP10.29□□□□□ -0.76
TDP1-202ENST00000393452 LONP1P36776 959 aaKnown RBP10.29□□□□□ -0.76
TDP1-202ENST00000393452 UBASH3AP57075 661 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 FMR1Q06787 632 aaKnown RBP eCLIP10.29□□□□□ -0.76
TDP1-202ENST00000393452 ARMCX5Q6P1M9 558 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 HHIPL2Q6UWX4 724 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 DPP8Q6V1X1 898 aaPredicted RBP10.29□□□□□ -0.76
TDP1-202ENST00000393452 TMC6Q7Z403 805 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 DPF2Q92785 391 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 MYO3BQ8WXR4 1341 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 GREB1LQ9C091 1923 aaPredicted RBP10.29□□□□□ -0.76
TDP1-202ENST00000393452 IGKV6D-41A0A0C4DH26 115 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 APBA3O96018 575 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 GOLGA8HP0CJ92 632 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 KCNJ6P48051 423 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 RASGRP2Q7LDG7 609 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 HEATR3Q7Z4Q2 680 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 IQUBQ8NA54 791 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 RASGRP4Q8TDF6 673 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 DDX4Q9NQI0 724 aaKnown RBP10.29□□□□□ -0.76
TDP1-202ENST00000393452 MTMR4Q9NYA4 1195 aa10.29□□□□□ -0.76
TDP1-202ENST00000393452 TTF2Q9UNY4 1162 aaKnown RBP10.29□□□□□ -0.76
TDP1-202ENST00000393452 CCDC194A0A1B0GVG4 234 aa10.28□□□□□ -0.76
TDP1-202ENST00000393452 SERPINC1P01008 464 aa10.28□□□□□ -0.76
TDP1-202ENST00000393452 AFMP43652 599 aa10.28□□□□□ -0.76
TDP1-202ENST00000393452 ZNF772Q68DY9 489 aaPredicted RBP10.28□□□□□ -0.76
TDP1-202ENST00000393452 PDXDC2PQ6P474 469 aa10.28□□□□□ -0.76
TDP1-202ENST00000393452 VSTM4Q8IW00 320 aa10.28□□□□□ -0.76
TDP1-202ENST00000393452 RIOX1Q9H6W3 641 aa10.28□□□□□ -0.76
TDP1-202ENST00000393452 NFE2L3Q9Y4A8 694 aa10.28□□□□□ -0.76
TDP1-202ENST00000393452 PARP3Q9Y6F1 533 aa10.28□□□□□ -0.76
TDP1-202ENST00000393452 RGPD3A6NKT7 1758 aaPredicted RBP10.28□□□□□ -0.76
TDP1-202ENST00000393452 RGPD4Q7Z3J3 1758 aa10.28□□□□□ -0.76
TDP1-202ENST00000393452 ADAMTSL1Q8N6G6 1762 aa10.28□□□□□ -0.76
TDP1-202ENST00000393452 SNHG28P0DPA3 235 aa10.28□□□□□ -0.76
TDP1-202ENST00000393452 SFPQP23246 707 aaKnown RBP eCLIP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms