RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PAK1Q13153 545 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 NFRKBQ6P4R8 1299 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 TMC4Q7Z404 712 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 OTUD6BQ8N6M0 293 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 LRWD1Q9UFC0 647 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 IFNL3Q8IZI9 196 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 IQUBQ8NA54 791 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 NOC3LQ8WTT2 800 aaKnown RBP18.36■□□□□ 0.53
PHTF1-205ENST00000393357 MS4A14Q96JA4 679 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 CTAGE1Q96RT6 745 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 PPANQ9NQ55 473 aaKnown RBP18.36■□□□□ 0.53
PHTF1-205ENST00000393357 SRPRBQ9Y5M8 271 aaKnown RBP18.36■□□□□ 0.53
PHTF1-205ENST00000393357 AGPSO00116 658 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 NKRFO15226 690 aaKnown RBP eCLIP18.36■□□□□ 0.53
PHTF1-205ENST00000393357 MOCS3O95396 460 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 ZFYP08048 801 aaPredicted RBP18.36■□□□□ 0.53
PHTF1-205ENST00000393357 MCTP2Q6DN12 878 aa18.36■□□□□ 0.53
PHTF1-205ENST00000393357 FAM207AQ9NSI2 230 aaPredicted RBP18.36■□□□□ 0.53
PHTF1-205ENST00000393357 ERCC5P28715 1186 aaPredicted RBP18.35■□□□□ 0.53
PHTF1-205ENST00000393357 PRCPP42785 496 aa18.35■□□□□ 0.53
PHTF1-205ENST00000393357 EPB41L4AQ9HCS5 686 aaPredicted RBP18.35■□□□□ 0.53
PHTF1-205ENST00000393357 PRPF6O94906 941 aaKnown RBP18.35■□□□□ 0.53
PHTF1-205ENST00000393357 ABCC6O95255 1503 aa18.35■□□□□ 0.53
PHTF1-205ENST00000393357 FMNL1O95466 1100 aaPredicted RBP18.35■□□□□ 0.53
PHTF1-205ENST00000393357 ITGA6P23229 1130 aa18.35■□□□□ 0.53
PHTF1-205ENST00000393357 ADD2P35612 726 aa18.35■□□□□ 0.53
PHTF1-205ENST00000393357 HERVK_113P62684 666 aa18.35■□□□□ 0.53
PHTF1-205ENST00000393357 NAA15Q9BXJ9 866 aaKnown RBP18.35■□□□□ 0.53
PHTF1-205ENST00000393357 JAG2Q9Y219 1238 aa18.35■□□□□ 0.53
PHTF1-205ENST00000393357 ADAMTS3O15072 1205 aa18.34■□□□□ 0.53
PHTF1-205ENST00000393357 OR8K1Q8NGG5 319 aa18.34■□□□□ 0.53
PHTF1-205ENST00000393357 STRN4Q9NRL3 753 aa18.34■□□□□ 0.53
PHTF1-205ENST00000393357 CACNA1FO60840 1977 aa18.34■□□□□ 0.53
PHTF1-205ENST00000393357 TCP11X2Q5H9J9 407 aa18.34■□□□□ 0.53
PHTF1-205ENST00000393357 GOLGB1Q14789 3259 aaKnown RBP18.34■□□□□ 0.53
PHTF1-205ENST00000393357 MYO1BO43795 1136 aa18.34■□□□□ 0.53
PHTF1-205ENST00000393357 PARP1P09874 1014 aaKnown RBP18.34■□□□□ 0.53
PHTF1-205ENST00000393357 E2F5Q15329 346 aa18.34■□□□□ 0.53
PHTF1-205ENST00000393357 ZNF654Q8IZM8 581 aa18.34■□□□□ 0.53
PHTF1-205ENST00000393357 FANCBQ8NB91 859 aa18.34■□□□□ 0.53
PHTF1-205ENST00000393357 TSEN2Q8NCE0 465 aaKnown RBP18.34■□□□□ 0.53
PHTF1-205ENST00000393357 AMPD2Q01433 879 aa18.33■□□□□ 0.53
PHTF1-205ENST00000393357 IFT88Q13099 833 aa18.33■□□□□ 0.53
PHTF1-205ENST00000393357 CCDC70Q6NSX1 233 aa18.33■□□□□ 0.53
PHTF1-205ENST00000393357 KANK3Q6NY19 840 aa18.33■□□□□ 0.53
PHTF1-205ENST00000393357 MAATS1Q7Z4T9 603 aa18.33■□□□□ 0.53
PHTF1-205ENST00000393357 LRP2BPQ9P2M1 347 aa18.33■□□□□ 0.53
PHTF1-205ENST00000393357 PACSIN2Q9UNF0 486 aaPredicted RBP18.33■□□□□ 0.53
PHTF1-205ENST00000393357 NMT2O60551 498 aa18.33■□□□□ 0.52
PHTF1-205ENST00000393357 EVX2Q03828 476 aa18.33■□□□□ 0.52
PHTF1-205ENST00000393357 CCDC178Q5BJE1 867 aa18.33■□□□□ 0.52
PHTF1-205ENST00000393357 LCORLQ8N3X6 602 aa18.33■□□□□ 0.52
PHTF1-205ENST00000393357 CRACR2BQ8N4Y2 399 aaPredicted RBP18.33■□□□□ 0.52
PHTF1-205ENST00000393357 SCLT1Q96NL6 688 aa18.33■□□□□ 0.52
PHTF1-205ENST00000393357 ZNHIT6Q9NWK9 470 aaKnown RBP18.33■□□□□ 0.52
PHTF1-205ENST00000393357 MAGEC2Q9UBF1 373 aaPredicted RBP18.33■□□□□ 0.52
PHTF1-205ENST00000393357 CEP131Q9UPN4 1083 aa18.33■□□□□ 0.52
PHTF1-205ENST00000393357 CPDO75976 1380 aa18.33■□□□□ 0.52
PHTF1-205ENST00000393357 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 KRT86O43790 486 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 MTIF2P46199 727 aaKnown RBP18.32■□□□□ 0.52
PHTF1-205ENST00000393357 TBC1D8BQ0IIM8 1120 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 TRADDQ15628 312 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 CT47A1Q5JQC4 288 aaPredicted RBP18.32■□□□□ 0.52
PHTF1-205ENST00000393357 LRP10Q7Z4F1 713 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 CXorf56Q9H5V9 222 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 CCNI2Q6ZMN8 369 aaPredicted RBP18.32■□□□□ 0.52
PHTF1-205ENST00000393357 TRAPPC11Q7Z392 1133 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 DNAAF5Q86Y56 855 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 CTCFLQ8NI51 663 aaPredicted RBP18.32■□□□□ 0.52
PHTF1-205ENST00000393357 WASF1Q92558 559 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 TBX22Q9Y458 520 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 MYH8P13535 1937 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 CHD2O14647 1828 aaKnown RBP18.32■□□□□ 0.52
PHTF1-205ENST00000393357 XDHP47989 1333 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 NLRP5P59047 1200 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 SETQ01105 290 aaPredicted RBP18.32■□□□□ 0.52
PHTF1-205ENST00000393357 KCNV1Q6PIU1 500 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 CCDC91Q7Z6B0 441 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 TMEM87BQ96K49 555 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 MMRN2Q9H8L6 949 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.32■□□□□ 0.52
PHTF1-205ENST00000393357 CAPN6Q9Y6Q1 641 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 UBR1Q8IWV7 1749 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 PIK3C2AO00443 1686 aa18.32■□□□□ 0.52
PHTF1-205ENST00000393357 DEXIO95424 95 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 IFNAR1P17181 557 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 STAT6P42226 847 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 KIF5AQ12840 1032 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 KRT28Q7Z3Y7 464 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 C2CD5Q86YS7 1000 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 SHISA4Q96DD7 197 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 KANSL2Q9H9L4 492 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 NFU1Q9UMS0 254 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 TTC38Q5R3I4 469 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 CDKAL1Q5VV42 579 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 CCDC42Q96M95 316 aa18.31■□□□□ 0.52
PHTF1-205ENST00000393357 CCDC43Q96MW1 224 aaKnown RBP18.31■□□□□ 0.52
PHTF1-205ENST00000393357 STRBPQ96SI9 672 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms