RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 ANKZF1Q9H8Y5 726 aa12.78□□□□□ -0.36
SPOP-202ENST00000393328 POLR3EQ9NVU0 708 aa12.78□□□□□ -0.36
SPOP-202ENST00000393328 CWC15Q9P013 229 aaKnown RBP12.78□□□□□ -0.36
SPOP-202ENST00000393328 MYH13Q9UKX3 1938 aa12.77□□□□□ -0.36
SPOP-202ENST00000393328 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.36
SPOP-202ENST00000393328 C6orf229H3BNL8 230 aa12.77□□□□□ -0.36
SPOP-202ENST00000393328 FMNL1O95466 1100 aaPredicted RBP12.77□□□□□ -0.36
SPOP-202ENST00000393328 SERPINB2P05120 415 aa12.77□□□□□ -0.36
SPOP-202ENST00000393328 VSNL1P62760 191 aa12.77□□□□□ -0.36
SPOP-202ENST00000393328 MRPS25P82663 173 aaKnown RBP12.77□□□□□ -0.36
SPOP-202ENST00000393328 AKAP17AQ02040 695 aaKnown RBP12.77□□□□□ -0.36
SPOP-202ENST00000393328 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.36
SPOP-202ENST00000393328 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.36
SPOP-202ENST00000393328 TGFBRAP1Q8WUH2 860 aa12.77□□□□□ -0.36
SPOP-202ENST00000393328 SHISA4Q96DD7 197 aa12.77□□□□□ -0.36
SPOP-202ENST00000393328 UBXN6Q9BZV1 441 aa12.77□□□□□ -0.36
SPOP-202ENST00000393328 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.36
SPOP-202ENST00000393328 PCDHB6Q9Y5E3 794 aa12.77□□□□□ -0.36
SPOP-202ENST00000393328 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.36
SPOP-202ENST00000393328 TSPY2A6NKD2 308 aa12.77□□□□□ -0.37
SPOP-202ENST00000393328 CCP110O43303 1012 aa12.77□□□□□ -0.37
SPOP-202ENST00000393328 CBFA2T2O43439 604 aa12.77□□□□□ -0.37
SPOP-202ENST00000393328 IFNAR1P17181 557 aa12.77□□□□□ -0.37
SPOP-202ENST00000393328 CMA1P23946 247 aa12.77□□□□□ -0.37
SPOP-202ENST00000393328 CDC25AP30304 524 aa12.77□□□□□ -0.37
SPOP-202ENST00000393328 SLC20A2Q08357 652 aa12.77□□□□□ -0.37
SPOP-202ENST00000393328 EARS2Q5JPH6 523 aaKnown RBP12.77□□□□□ -0.37
SPOP-202ENST00000393328 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.37
SPOP-202ENST00000393328 RAD9BQ6WBX8 426 aa12.77□□□□□ -0.37
SPOP-202ENST00000393328 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.77□□□□□ -0.37
SPOP-202ENST00000393328 GSPT2Q8IYD1 628 aaKnown RBP12.77□□□□□ -0.37
SPOP-202ENST00000393328 SRRTQ9BXP5 876 aaKnown RBP12.77□□□□□ -0.37
SPOP-202ENST00000393328 CRNKL1Q9BZJ0 848 aaKnown RBP12.77□□□□□ -0.37
SPOP-202ENST00000393328 POLD4Q9HCU8 107 aa12.77□□□□□ -0.37
SPOP-202ENST00000393328 LDHBP07195 334 aaKnown RBP12.76□□□□□ -0.37
SPOP-202ENST00000393328 GYS1P13807 737 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 NOP2P46087 812 aaKnown RBP12.76□□□□□ -0.37
SPOP-202ENST00000393328 SLC39A14Q15043 492 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 SAFBQ15424 915 aaKnown RBP eCLIP12.76□□□□□ -0.37
SPOP-202ENST00000393328 SEC23AQ15436 765 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 MUM1L1Q5H9M0 696 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 TTC19Q6DKK2 380 aaPredicted RBP12.76□□□□□ -0.37
SPOP-202ENST00000393328 USP49Q70CQ1 688 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 IQCA1Q86XH1 822 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 CPVLQ9H3G5 476 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 ENC1O14682 589 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 ADAMTS3O15072 1205 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 POLR2DO15514 142 aaKnown RBP12.76□□□□□ -0.37
SPOP-202ENST00000393328 YEATS4O95619 227 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 AFMP43652 599 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 TOB1P50616 345 aaPredicted RBP12.76□□□□□ -0.37
SPOP-202ENST00000393328 GRAPQ13588 217 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 MSL1Q68DK7 614 aa12.76□□□□□ -0.37
SPOP-202ENST00000393328 GRAPLQ8TC17 118 aaPredicted RBP12.76□□□□□ -0.37
SPOP-202ENST00000393328 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
SPOP-202ENST00000393328 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 IBSPP21815 317 aaPredicted RBP12.75□□□□□ -0.37
SPOP-202ENST00000393328 USP17L1Q7RTZ2 530 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 CATIPQ7Z7H3 387 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 NOSTRINQ8IVI9 506 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 NOA1Q8NC60 698 aaKnown RBP12.75□□□□□ -0.37
SPOP-202ENST00000393328 RABGGTAQ92696 567 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 BPIFA3Q9BQP9 254 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 TSPYL1Q9H0U9 437 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 KCNH3Q9ULD8 1083 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 WNT7AO00755 349 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 CUTAO60888 179 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 TPM1P09493 284 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 CCT6AP40227 531 aaKnown RBP12.75□□□□□ -0.37
SPOP-202ENST00000393328 RBL2Q08999 1139 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 SPECC1LQ69YQ0 1117 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 SLC35F6Q8N357 371 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 MXD3Q9BW11 206 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 TRIM10Q9UDY6 481 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 SERTAD1Q9UHV2 236 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 TRPC5Q9UL62 973 aaPredicted RBP12.75□□□□□ -0.37
SPOP-202ENST00000393328 EIF3CLB5ME19 914 aaKnown RBP12.75□□□□□ -0.37
SPOP-202ENST00000393328 IKBKBO14920 756 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 MMP1P03956 469 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 TFAP4Q01664 338 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 PTPAQ15257 358 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 BEND6Q5SZJ8 279 aaPredicted RBP12.75□□□□□ -0.37
SPOP-202ENST00000393328 EXOC4Q96A65 974 aa12.75□□□□□ -0.37
SPOP-202ENST00000393328 EIF3CQ99613 913 aaKnown RBP12.75□□□□□ -0.37
SPOP-202ENST00000393328 LRRIQ3A6PVS8 624 aaPredicted RBP12.74□□□□□ -0.37
SPOP-202ENST00000393328 DDR1Q08345 913 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 ATL3Q6DD88 541 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 CAPZA3Q96KX2 299 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 MAP3K14Q99558 947 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 FAM204AQ9H8W3 233 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 SPATA31A6Q5VVP1 1343 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 SLURP2P0DP57 97 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 PLCD1P51178 756 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 DNAJC21Q5F1R6 531 aaKnown RBP12.74□□□□□ -0.37
SPOP-202ENST00000393328 EHD4Q9H223 541 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 MKNK2Q9HBH9 465 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 HDAC6Q9UBN7 1215 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 MAN1B1Q9UKM7 699 aa12.74□□□□□ -0.37
SPOP-202ENST00000393328 STX8Q9UNK0 236 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms