RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 FOXP3Q9BZS1 431 aa5.92□□□□□ -1.46
TRAV40-201ENST00000390467 PRDM14Q9GZV8 571 aa5.92□□□□□ -1.46
TRAV40-201ENST00000390467 ZNRF3Q9ULT6 936 aa5.92□□□□□ -1.46
TRAV40-201ENST00000390467 TMEM82A0PJX8 343 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 FAM86C2PA6NEL3 165 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 DBX1A6NMT0 343 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 NOTOA8MTQ0 251 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 CLEC3AO75596 197 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 PRAMEF1O95521 474 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 TSPAN15O95858 294 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 ACRP10323 421 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 GALK1P51570 392 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 RACK1P63244 317 aaKnown RBP5.91□□□□□ -1.46
TRAV40-201ENST00000390467 SYDE1Q6ZW31 735 aaPredicted RBP5.91□□□□□ -1.46
TRAV40-201ENST00000390467 USHBP1Q8N6Y0 703 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 LINC01599Q8WXQ3 324 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 SLC6A18Q96N87 628 aa5.91□□□□□ -1.46
TRAV40-201ENST00000390467 METTL5Q9NRN9 209 aaKnown RBP5.91□□□□□ -1.46
TRAV40-201ENST00000390467 FITM1A5D6W6 292 aa5.9□□□□□ -1.46
TRAV40-201ENST00000390467 CCNFP41002 786 aa5.9□□□□□ -1.46
TRAV40-201ENST00000390467 NR0B2Q15466 257 aa5.9□□□□□ -1.46
TRAV40-201ENST00000390467 ZPBP2Q6X784 338 aa5.9□□□□□ -1.46
TRAV40-201ENST00000390467 RNF111Q6ZNA4 994 aa5.9□□□□□ -1.46
TRAV40-201ENST00000390467 DAGLBQ8NCG7 672 aa5.9□□□□□ -1.46
TRAV40-201ENST00000390467 BHLHE22Q8NFJ8 381 aaPredicted RBP5.9□□□□□ -1.46
TRAV40-201ENST00000390467 ENOX1Q8TC92 643 aaKnown RBP5.9□□□□□ -1.46
TRAV40-201ENST00000390467 DHX38Q92620 1227 aaKnown RBP5.9□□□□□ -1.46
TRAV40-201ENST00000390467 ASCC2Q9H1I8 757 aaPredicted RBP5.9□□□□□ -1.46
TRAV40-201ENST00000390467 EPB41L4BQ9H329 900 aa5.9□□□□□ -1.46
TRAV40-201ENST00000390467 SIGLEC6O43699 453 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 PSPNO60542 156 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 FKTNO75072 461 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 USP2O75604 605 aaPredicted RBP5.89□□□□□ -1.47
TRAV40-201ENST00000390467 C1QTNF9P0C862 333 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 RPL10P27635 214 aaKnown RBP5.89□□□□□ -1.47
TRAV40-201ENST00000390467 RAD51AP2Q09MP3 1159 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 LRRFIP1Q32MZ4 808 aaKnown RBP5.89□□□□□ -1.47
TRAV40-201ENST00000390467 WAPLQ7Z5K2 1190 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 LILRA2Q8N149 483 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 OXR1Q8N573 874 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 ZNF655Q8N720 491 aaPredicted RBP5.89□□□□□ -1.47
TRAV40-201ENST00000390467 ANKS4BQ8N8V4 417 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 FBXO15Q8NCQ5 510 aaPredicted RBP5.89□□□□□ -1.47
TRAV40-201ENST00000390467 SHISA4Q96DD7 197 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 MKRN2Q9H000 416 aaKnown RBP5.89□□□□□ -1.47
TRAV40-201ENST00000390467 DCP1AQ9NPI6 582 aaPredicted RBP5.89□□□□□ -1.47
TRAV40-201ENST00000390467 GFOD1Q9NXC2 390 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 DDX41Q9UJV9 622 aaKnown RBP5.89□□□□□ -1.47
TRAV40-201ENST00000390467 TCFL5Q9UL49 500 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 PPT2Q9UMR5 302 aa5.89□□□□□ -1.47
TRAV40-201ENST00000390467 C9IYK1 514 aa5.88□□□□□ -1.47
TRAV40-201ENST00000390467 MEIS1O00470 390 aa5.88□□□□□ -1.47
TRAV40-201ENST00000390467 SHOXO15266 292 aa5.88□□□□□ -1.47
TRAV40-201ENST00000390467 SYPP08247 313 aa5.88□□□□□ -1.47
TRAV40-201ENST00000390467 CTSKP43235 329 aa5.88□□□□□ -1.47
TRAV40-201ENST00000390467 DUSP4Q13115 394 aa5.88□□□□□ -1.47
TRAV40-201ENST00000390467 METTL16Q86W50 562 aaKnown RBP5.88□□□□□ -1.47
TRAV40-201ENST00000390467 RNF34Q969K3 372 aa5.88□□□□□ -1.47
TRAV40-201ENST00000390467 MAP6Q96JE9 813 aa5.88□□□□□ -1.47
TRAV40-201ENST00000390467 GPR160Q9UJ42 338 aa5.88□□□□□ -1.47
TRAV40-201ENST00000390467 YBX2Q9Y2T7 364 aaKnown RBP5.88□□□□□ -1.47
TRAV40-201ENST00000390467 VAMP1P23763 118 aa5.87□□□□□ -1.47
TRAV40-201ENST00000390467 RAP1GAPP47736 663 aa5.87□□□□□ -1.47
TRAV40-201ENST00000390467 PCBP3P57721 371 aaKnown RBP5.87□□□□□ -1.47
TRAV40-201ENST00000390467 CHRNEQ04844 493 aa5.87□□□□□ -1.47
TRAV40-201ENST00000390467 ZYXQ15942 572 aaKnown RBP5.87□□□□□ -1.47
TRAV40-201ENST00000390467 TDRD10Q5VZ19 366 aaKnown RBP5.87□□□□□ -1.47
TRAV40-201ENST00000390467 SPOCD1Q6ZMY3 1216 aa5.87□□□□□ -1.47
TRAV40-201ENST00000390467 RUFY4Q6ZNE9 571 aa5.87□□□□□ -1.47
TRAV40-201ENST00000390467 PPFIBP1Q86W92 1011 aa5.87□□□□□ -1.47
TRAV40-201ENST00000390467 C1QL4Q86Z23 238 aa5.87□□□□□ -1.47
TRAV40-201ENST00000390467 LINC00116Q8NCU8 138 aa5.87□□□□□ -1.47
TRAV40-201ENST00000390467 INTS4Q96HW7 963 aaKnown RBP5.87□□□□□ -1.47
TRAV40-201ENST00000390467 HHIPL1Q96JK4 782 aa5.87□□□□□ -1.47
TRAV40-201ENST00000390467 PPP1R16BQ96T49 567 aa5.87□□□□□ -1.47
TRAV40-201ENST00000390467 CHST7Q9NS84 486 aa5.87□□□□□ -1.47
TRAV40-201ENST00000390467 SUCOQ9UBS9 1254 aaKnown RBP5.87□□□□□ -1.47
TRAV40-201ENST00000390467 CEBPAP49715 358 aaPredicted RBP5.86□□□□□ -1.47
TRAV40-201ENST00000390467 AUHQ13825 339 aaKnown RBP5.86□□□□□ -1.47
TRAV40-201ENST00000390467 CRTC3Q6UUV7 619 aa5.86□□□□□ -1.47
TRAV40-201ENST00000390467 NLRX1Q86UT6 975 aa5.86□□□□□ -1.47
TRAV40-201ENST00000390467 IRF2BP1Q8IU81 584 aa5.86□□□□□ -1.47
TRAV40-201ENST00000390467 HOMEZQ8IX15 550 aa5.86□□□□□ -1.47
TRAV40-201ENST00000390467 SYTL4Q96C24 671 aaPredicted RBP5.86□□□□□ -1.47
TRAV40-201ENST00000390467 FERD3LQ96RJ6 166 aa5.86□□□□□ -1.47
TRAV40-201ENST00000390467 CWC22Q9HCG8 908 aaKnown RBP5.86□□□□□ -1.47
TRAV40-201ENST00000390467 ZMYM5Q9UJ78 669 aa5.86□□□□□ -1.47
TRAV40-201ENST00000390467 MYOCOSA0A1B0GUC4 107 aa5.85□□□□□ -1.47
TRAV40-201ENST00000390467 ETV2O00321 342 aaPredicted RBP5.85□□□□□ -1.47
TRAV40-201ENST00000390467 SCAMP3O14828 347 aaKnown RBP5.85□□□□□ -1.47
TRAV40-201ENST00000390467 CFPP27918 469 aa5.85□□□□□ -1.47
TRAV40-201ENST00000390467 PAK2Q13177 524 aa5.85□□□□□ -1.47
TRAV40-201ENST00000390467 CCDC81Q6ZN84 652 aa5.85□□□□□ -1.47
TRAV40-201ENST00000390467 LSRQ86X29 649 aaPredicted RBP5.85□□□□□ -1.47
TRAV40-201ENST00000390467 SPPL2CQ8IUH8 684 aa5.85□□□□□ -1.47
TRAV40-201ENST00000390467 SIRT2Q8IXJ6 389 aa5.85□□□□□ -1.47
TRAV40-201ENST00000390467 TAB3Q8N5C8 712 aaPredicted RBP5.85□□□□□ -1.47
TRAV40-201ENST00000390467 SLC6A17Q9H1V8 727 aa5.85□□□□□ -1.47
TRAV40-201ENST00000390467 CD320Q9NPF0 282 aa5.85□□□□□ -1.47
TRAV40-201ENST00000390467 PCDHB12Q9Y5F1 795 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms