RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 MBD3O95983 291 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 SAFBQ15424 915 aaKnown RBP eCLIP14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 HOMER1Q86YM7 354 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 GPC2Q8N158 579 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 RGS22Q8NE09 1264 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 PGBD1Q96JS3 809 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 PHF20Q9BVI0 1012 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 GPRC5DQ9NZD1 345 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 SNHG28P0DPA3 235 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 TNNI2P48788 182 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 TTBK2Q6IQ55 1244 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 KCTD1Q719H9 257 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 TEPSINQ96N21 525 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 ELP1O95163 1332 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 FAM205CA6NFA0 338 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 XBP1P17861 261 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 MMP14P50281 582 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 NPY5RQ15761 445 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 PRAMEF18Q5VWM3 479 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 TYW1BQ6NUM6 668 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 NOSTRINQ8IVI9 506 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 CABP5Q9NP86 173 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 NYAP2Q9P242 653 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 RCOR1Q9UKL0 485 aa14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 ISY1Q9ULR0 285 aaKnown RBP14.06□□□□□ -0.16
SPTBN1-203ENST00000389980 SLC16A2P36021 539 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 ZNF543Q08ER8 600 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 CCDC96Q2M329 555 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 NOM1Q5C9Z4 860 aaKnown RBP14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 EARS2Q5JPH6 523 aaKnown RBP14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 C9orf131Q5VYM1 1079 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 WWC2Q6AWC2 1192 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 PIGSQ96S52 555 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 LZTS2Q9BRK4 669 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 SPZ1Q9BXG8 430 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 DEFB129Q9H1M3 183 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 FOXP1Q9H334 677 aaPredicted RBP14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 A0A1W2PRG0 241 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 FSD2A1L4K1 749 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 HIRAP54198 1017 aaPredicted RBP14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 NLRP5P59047 1200 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 TNFAIP1Q13829 316 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 ASPRV1Q53RT3 343 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 ANGEL2Q5VTE6 544 aaKnown RBP14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 HEATR3Q7Z4Q2 680 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 CCDC84Q86UT8 332 aaPredicted RBP14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 MKL1Q969V6 931 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 RTEL1Q9NZ71 1219 aa14.05□□□□□ -0.16
SPTBN1-203ENST00000389980 TBC1D12O60347 775 aa14.04□□□□□ -0.16
SPTBN1-203ENST00000389980 KRT2P35908 639 aa14.04□□□□□ -0.16
SPTBN1-203ENST00000389980 ECE1P42892 770 aa14.04□□□□□ -0.16
SPTBN1-203ENST00000389980 ZSCAN23Q3MJ62 389 aa14.04□□□□□ -0.16
SPTBN1-203ENST00000389980 ANO1Q5XXA6 986 aa14.04□□□□□ -0.16
SPTBN1-203ENST00000389980 ATL3Q6DD88 541 aa14.04□□□□□ -0.16
SPTBN1-203ENST00000389980 LINC00301Q8NCQ3 95 aa14.04□□□□□ -0.16
SPTBN1-203ENST00000389980 NUP88Q99567 741 aaPredicted RBP14.04□□□□□ -0.16
SPTBN1-203ENST00000389980 ZBTB21Q9ULJ3 1066 aa14.04□□□□□ -0.16
SPTBN1-203ENST00000389980 GOLGA6L4A6NEF3 574 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 LIG1P18858 919 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 ATP2B1P20020 1258 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 TOB1P50616 345 aaPredicted RBP14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 STK38Q15208 465 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 SF3A1Q15459 793 aaKnown RBP14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 L1TD1Q5T7N2 865 aaKnown RBP14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 SLFN13Q68D06 897 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 GAS2L3Q86XJ1 694 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 ACER1Q8TDN7 264 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 RRP36Q96EU6 259 aaKnown RBP14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 POLR3EQ9NVU0 708 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 F5H6K3 240 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 ME1P48163 572 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 KLRC3Q07444 240 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 PPP4R3BQ5MIZ7 849 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 NBPF12Q5TAG4 269 aaPredicted RBP14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 SPICE1Q8N0Z3 855 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 PANK2Q9BZ23 570 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 RIOX1Q9H6W3 641 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 GGA3Q9NZ52 723 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 FZD1Q9UP38 647 aa14.03□□□□□ -0.16
SPTBN1-203ENST00000389980 ATAD5Q96QE3 1844 aa14.02□□□□□ -0.16
SPTBN1-203ENST00000389980 STXBP3O00186 592 aa14.02□□□□□ -0.16
SPTBN1-203ENST00000389980 MARCKSP29966 332 aaPredicted RBP14.02□□□□□ -0.16
SPTBN1-203ENST00000389980 CAP2P40123 477 aa14.02□□□□□ -0.16
SPTBN1-203ENST00000389980 SLC1A4P43007 532 aa14.02□□□□□ -0.16
SPTBN1-203ENST00000389980 NASPP49321 788 aaPredicted RBP14.02□□□□□ -0.16
SPTBN1-203ENST00000389980 MAP3K10Q02779 954 aa14.02□□□□□ -0.16
SPTBN1-203ENST00000389980 ADGRF4Q8IZF3 695 aa14.02□□□□□ -0.16
SPTBN1-203ENST00000389980 BICD2Q8TD16 824 aa14.02□□□□□ -0.16
SPTBN1-203ENST00000389980 RASGRP4Q8TDF6 673 aa14.02□□□□□ -0.16
SPTBN1-203ENST00000389980 BARHL2Q9NY43 387 aa14.02□□□□□ -0.16
SPTBN1-203ENST00000389980 PHF20L1A8MW92 1017 aa14.02□□□□□ -0.17
SPTBN1-203ENST00000389980 NDUFB10O96000 172 aa14.02□□□□□ -0.17
SPTBN1-203ENST00000389980 GPR162Q16538 588 aa14.02□□□□□ -0.17
SPTBN1-203ENST00000389980 KIAA1755Q5JYT7 1200 aa14.02□□□□□ -0.17
SPTBN1-203ENST00000389980 PKNOX2Q96KN3 472 aa14.02□□□□□ -0.17
SPTBN1-203ENST00000389980 GLIS2Q9BZE0 524 aaPredicted RBP14.02□□□□□ -0.17
SPTBN1-203ENST00000389980 JMJD4Q9H9V9 463 aa14.02□□□□□ -0.17
SPTBN1-203ENST00000389980 SEC63Q9UGP8 760 aaKnown RBP14.02□□□□□ -0.17
SPTBN1-203ENST00000389980 PCDHA7Q9UN72 937 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms