RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 GLIS2Q9BZE0 524 aaPredicted RBP10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 TTLL1O95922 423 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 GH2P01242 217 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 TXKP42681 527 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 ANO1Q5XXA6 986 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 CEP68Q76N32 757 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 ERCC4Q92889 916 aaPredicted RBP10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 BRF1Q92994 677 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 CCDC77Q9BR77 488 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 FARP1Q9Y4F1 1045 aaPredicted RBP10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 RALGAPBQ86X10 1494 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 GOLGA6L10A6NI86 522 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 CTSHP09668 335 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 TMEM191BP0C7N4 346 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 ZAP70P43403 619 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 PPFIA1Q13136 1202 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 KRT24Q2M2I5 525 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 DEFB128Q7Z7B8 93 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 SH2B1Q9NRF2 756 aaPredicted RBP10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 ATP8A2Q9NTI2 1148 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 FAM184BQ9ULE4 1060 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 G3BP2Q9UN86 482 aaKnown RBP10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 BIVM-ERCC5R4GMW8 1640 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 DISP1Q96F81 1524 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 INSRP06213 1382 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 PI4K2BG5E9Z4 385 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 PDIA4P13667 645 aaKnown RBP10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 PRR16Q569H4 304 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 SMIM5Q71RC9 77 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 TRMT44Q8IYL2 757 aaKnown RBP10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 PI4K2BQ8TCG2 481 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 CAPNS2Q96L46 248 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 ZNF830Q96NB3 372 aaPredicted RBP10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 PLVAPQ9BX97 442 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 AMNQ9BXJ7 453 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 SENP6Q9GZR1 1112 aaPredicted RBP10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 HESX1Q9UBX0 185 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 MYO5CQ9NQX4 1742 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 IL16Q14005 1332 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 ARL4DP49703 201 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 KIF11P52732 1056 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 DCAF17Q5H9S7 520 aaPredicted RBP10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 GIMAP8Q8ND71 665 aaPredicted RBP10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 KIFAP3Q92845 792 aa10.28□□□□□ -0.76
LIMCH1-202ENST00000381753 MYPNQ86TC9 1320 aa10.27□□□□□ -0.76
LIMCH1-202ENST00000381753 TOP1P11387 765 aaKnown RBP10.27□□□□□ -0.76
LIMCH1-202ENST00000381753 ATP8B2P98198 1209 aa10.27□□□□□ -0.76
LIMCH1-202ENST00000381753 PLCB3Q01970 1234 aa10.27□□□□□ -0.76
LIMCH1-202ENST00000381753 SP3Q02447 781 aa10.27□□□□□ -0.76
LIMCH1-202ENST00000381753 PPP2R5AQ15172 486 aa10.27□□□□□ -0.76
LIMCH1-202ENST00000381753 BTBD8Q5XKL5 378 aa10.27□□□□□ -0.76
LIMCH1-202ENST00000381753 ANKRD13CQ8N6S4 541 aa10.27□□□□□ -0.76
LIMCH1-202ENST00000381753 PPP1R12CQ9BZL4 782 aa10.27□□□□□ -0.76
LIMCH1-202ENST00000381753 DYRK4Q9NR20 520 aa10.27□□□□□ -0.76
LIMCH1-202ENST00000381753 CPB1P15086 417 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 EIF4A1P60842 406 aaKnown RBP10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 NBPF10Q6P3W6 841 aaKnown RBP10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 KCTD1Q719H9 257 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 CCDC50Q8IVM0 306 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 SREK1Q8WXA9 508 aaKnown RBP10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 TSC1Q92574 1164 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 PTPRTO14522 1441 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 RGMBQ6NW40 437 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 C7orf61Q8IZ16 206 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 PCSK9Q8NBP7 692 aaKnown RBP10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 UPF3BQ9BZI7 483 aaKnown RBP10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 CPSF3Q9UKF6 684 aaKnown RBP10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 IKBKGQ9Y6K9 419 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 GPAA1O43292 621 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 STK10O94804 968 aaKnown RBP10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 EPB41P11171 864 aaKnown RBP10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 APPBP2Q92624 585 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 RAVER2Q9HCJ3 691 aaKnown RBP10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 ST7Q9NRC1 585 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 FAM169AQ9Y6X4 670 aa10.27□□□□□ -0.77
LIMCH1-202ENST00000381753 TOMM70O94826 608 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 TNNC1P63316 161 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 SYDE2Q5VT97 1194 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 REM2Q8IYK8 340 aaPredicted RBP10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 MARCH10Q8NA82 808 aaPredicted RBP10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 RGL2O15211 777 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 SUPT20HL2P0C7V6 817 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 AFMP43652 599 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 SV2BQ7L1I2 683 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 TMEM199Q8N511 208 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 CCP110O43303 1012 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 POLR2BP30876 1174 aaKnown RBP10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 PSMC4P43686 418 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 NMIQ13287 307 aaPredicted RBP10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 DMP1Q13316 513 aaPredicted RBP10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 PTPROQ16827 1216 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 BBS5Q8N3I7 341 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 GABPB2Q8TAK5 448 aaPredicted RBP10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 TRERF1Q96PN7 1200 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 NCAPGQ9BPX3 1015 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 RNF17Q9BXT8 1623 aaKnown RBP10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 NEURL1BA8MQ27 555 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 STAT3P40763 770 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 SOX10P56693 466 aa10.26□□□□□ -0.77
LIMCH1-202ENST00000381753 INHBEP58166 350 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms