RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 NUP88Q99567 741 aaPredicted RBP23.04■■□□□ 1.28
CLN5-201ENST00000377453 CHP1Q99653 195 aa23.04■■□□□ 1.28
CLN5-201ENST00000377453 RHOXF2Q9BQY4 288 aa23.04■■□□□ 1.28
CLN5-201ENST00000377453 PES1O00541 588 aaKnown RBP23.03■■□□□ 1.28
CLN5-201ENST00000377453 KIF5CO60282 957 aa23.03■■□□□ 1.28
CLN5-201ENST00000377453 SMC1AQ14683 1233 aaKnown RBP23.03■■□□□ 1.28
CLN5-201ENST00000377453 FILIP1LQ4L180 1135 aa23.03■■□□□ 1.28
CLN5-201ENST00000377453 STAG2Q8N3U4 1231 aa23.03■■□□□ 1.28
CLN5-201ENST00000377453 MTA3Q9BTC8 594 aa23.03■■□□□ 1.28
CLN5-201ENST00000377453 FUT8Q9BYC5 575 aa23.03■■□□□ 1.28
CLN5-201ENST00000377453 GNL3LQ9NVN8 582 aaKnown RBP23.03■■□□□ 1.28
CLN5-201ENST00000377453 H3BQF6 201 aa23.03■■□□□ 1.28
CLN5-201ENST00000377453 SCG2P13521 617 aa23.03■■□□□ 1.28
CLN5-201ENST00000377453 PMS1P54277 932 aaKnown RBP23.03■■□□□ 1.28
CLN5-201ENST00000377453 TYW1BQ6NUM6 668 aa23.03■■□□□ 1.28
CLN5-201ENST00000377453 ANKZF1Q9H8Y5 726 aa23.03■■□□□ 1.28
CLN5-201ENST00000377453 ARFGAP3Q9NP61 516 aa23.03■■□□□ 1.28
CLN5-201ENST00000377453 DCP1AQ9NPI6 582 aaPredicted RBP23.03■■□□□ 1.28
CLN5-201ENST00000377453 CACNA1SQ13698 1873 aa23.02■■□□□ 1.28
CLN5-201ENST00000377453 USP17L8P0C7I0 530 aa23.02■■□□□ 1.28
CLN5-201ENST00000377453 CYP2C19P33261 490 aa23.02■■□□□ 1.28
CLN5-201ENST00000377453 COPB1P53618 953 aaKnown RBP23.02■■□□□ 1.28
CLN5-201ENST00000377453 LONRF2Q1L5Z9 754 aa23.02■■□□□ 1.28
CLN5-201ENST00000377453 CAVIN4Q5BKX8 364 aa23.02■■□□□ 1.28
CLN5-201ENST00000377453 MARCH10Q8NA82 808 aaPredicted RBP23.02■■□□□ 1.28
CLN5-201ENST00000377453 RABGGTAQ92696 567 aa23.02■■□□□ 1.28
CLN5-201ENST00000377453 NSUN4Q96CB9 384 aaKnown RBP23.02■■□□□ 1.28
CLN5-201ENST00000377453 RBM28Q9NW13 759 aaKnown RBP23.02■■□□□ 1.28
CLN5-201ENST00000377453 RNF216Q9NWF9 866 aaPredicted RBP23.02■■□□□ 1.28
CLN5-201ENST00000377453 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.02■■□□□ 1.28
CLN5-201ENST00000377453 MYH14Q7Z406 1995 aaKnown RBP23.02■■□□□ 1.28
CLN5-201ENST00000377453 TXLNAP40222 546 aa23.02■■□□□ 1.28
CLN5-201ENST00000377453 PRCPP42785 496 aa23.02■■□□□ 1.28
CLN5-201ENST00000377453 IQUBQ8NA54 791 aa23.02■■□□□ 1.28
CLN5-201ENST00000377453 DYNLL2Q96FJ2 89 aa23.02■■□□□ 1.28
CLN5-201ENST00000377453 BRIP1Q9BX63 1249 aa23.02■■□□□ 1.28
CLN5-201ENST00000377453 TXNRD3Q86VQ6 643 aa23.01■■□□□ 1.27
CLN5-201ENST00000377453 CPVLQ9H3G5 476 aa23.01■■□□□ 1.27
CLN5-201ENST00000377453 ABHD10Q9NUJ1 306 aa23.01■■□□□ 1.27
CLN5-201ENST00000377453 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.01■■□□□ 1.27
CLN5-201ENST00000377453 DOT1LQ8TEK3 1739 aa23.01■■□□□ 1.27
CLN5-201ENST00000377453 ROBO1Q9Y6N7 1651 aa23.01■■□□□ 1.27
CLN5-201ENST00000377453 TSPY2A6NKD2 308 aa23.01■■□□□ 1.27
CLN5-201ENST00000377453 KCNJ18B7U540 433 aa23.01■■□□□ 1.27
CLN5-201ENST00000377453 PAK1Q13153 545 aa23.01■■□□□ 1.27
CLN5-201ENST00000377453 KCNJ12Q14500 433 aa23.01■■□□□ 1.27
CLN5-201ENST00000377453 SRGAP1Q7Z6B7 1085 aa23.01■■□□□ 1.27
CLN5-201ENST00000377453 TPM1P09493 284 aa23■■□□□ 1.27
CLN5-201ENST00000377453 MYH13Q9UKX3 1938 aa23■■□□□ 1.27
CLN5-201ENST00000377453 MCM6Q14566 821 aa23■■□□□ 1.27
CLN5-201ENST00000377453 DDB1Q16531 1140 aa23■■□□□ 1.27
CLN5-201ENST00000377453 GPIHBP1Q8IV16 184 aa23■■□□□ 1.27
CLN5-201ENST00000377453 TMEM60Q9H2L4 133 aa23■■□□□ 1.27
CLN5-201ENST00000377453 RPN1P04843 607 aaKnown RBP22.99■■□□□ 1.27
CLN5-201ENST00000377453 GTF2E1P29083 439 aaPredicted RBP22.99■■□□□ 1.27
CLN5-201ENST00000377453 KRT9P35527 623 aa22.99■■□□□ 1.27
CLN5-201ENST00000377453 ARHGAP25P42331 645 aa22.99■■□□□ 1.27
CLN5-201ENST00000377453 TCP11X2Q5H9J9 407 aa22.99■■□□□ 1.27
CLN5-201ENST00000377453 NCAPH2Q6IBW4 605 aa22.99■■□□□ 1.27
CLN5-201ENST00000377453 RCSD1Q6JBY9 416 aa22.99■■□□□ 1.27
CLN5-201ENST00000377453 LRRC15Q8TF66 581 aa22.99■■□□□ 1.27
CLN5-201ENST00000377453 UBXN6Q9BZV1 441 aa22.99■■□□□ 1.27
CLN5-201ENST00000377453 CDC23Q9UJX2 597 aa22.99■■□□□ 1.27
CLN5-201ENST00000377453 DDAH1O94760 285 aa22.99■■□□□ 1.27
CLN5-201ENST00000377453 UBXN1Q04323 297 aa22.99■■□□□ 1.27
CLN5-201ENST00000377453 CTAGE1Q96RT6 745 aa22.99■■□□□ 1.27
CLN5-201ENST00000377453 IRF2BP1Q8IU81 584 aa22.98■■□□□ 1.27
CLN5-201ENST00000377453 CNGA4Q8IV77 575 aa22.98■■□□□ 1.27
CLN5-201ENST00000377453 RASSF8Q8NHQ8 419 aa22.98■■□□□ 1.27
CLN5-201ENST00000377453 MYH8P13535 1937 aa22.98■■□□□ 1.27
CLN5-201ENST00000377453 GTPBP6O43824 516 aaPredicted RBP22.98■■□□□ 1.27
CLN5-201ENST00000377453 HNRNPH2P55795 449 aaKnown RBP22.98■■□□□ 1.27
CLN5-201ENST00000377453 UBE4AQ14139 1066 aa22.98■■□□□ 1.27
CLN5-201ENST00000377453 PPP2R5BQ15173 497 aa22.98■■□□□ 1.27
CLN5-201ENST00000377453 PFKFB3Q16875 520 aaPredicted RBP22.98■■□□□ 1.27
CLN5-201ENST00000377453 SLC35G1Q2M3R5 365 aa22.98■■□□□ 1.27
CLN5-201ENST00000377453 MCM9Q9NXL9 1143 aa22.98■■□□□ 1.27
CLN5-201ENST00000377453 LIMA1Q9UHB6 759 aaKnown RBP22.98■■□□□ 1.27
CLN5-201ENST00000377453 USP17L3A6NCW0 530 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 USP17L4A6NCW7 530 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 ENC1O14682 589 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 N4BP1O75113 896 aaKnown RBP22.97■■□□□ 1.27
CLN5-201ENST00000377453 STAT6P42226 847 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 USP17L1Q7RTZ2 530 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 NOA1Q8NC60 698 aaKnown RBP22.97■■□□□ 1.27
CLN5-201ENST00000377453 SLC44A5Q8NCS7 719 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 HDAC6Q9UBN7 1215 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 GUCA1BQ9UMX6 200 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 REXO2Q9Y3B8 237 aaKnown RBP22.97■■□□□ 1.27
CLN5-201ENST00000377453 PHLPP1O60346 1717 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 CTAGE9A4FU28 777 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 C4orf32Q8N8J7 132 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 BSDC1Q9NW68 430 aaPredicted RBP22.97■■□□□ 1.27
CLN5-201ENST00000377453 RWDD2AQ9UIY3 292 aa22.97■■□□□ 1.27
CLN5-201ENST00000377453 NKRFO15226 690 aaKnown RBP eCLIP22.96■■□□□ 1.27
CLN5-201ENST00000377453 FGRP09769 529 aa22.96■■□□□ 1.27
CLN5-201ENST00000377453 CALM1P0DP23 149 aa22.96■■□□□ 1.27
CLN5-201ENST00000377453 CALM2P0DP24 149 aa22.96■■□□□ 1.27
CLN5-201ENST00000377453 CALM3P0DP25 149 aa22.96■■□□□ 1.27
CLN5-201ENST00000377453 KLK7P49862 253 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms