RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 TUBGCP2Q9BSJ2 902 aa10.04□□□□□ -0.8
CRNKL1-201ENST00000377327 RAB17Q9H0T7 212 aa10.04□□□□□ -0.8
CRNKL1-201ENST00000377327 KLC4Q9NSK0 619 aa10.04□□□□□ -0.8
CRNKL1-201ENST00000377327 GJB4Q9NTQ9 266 aa10.04□□□□□ -0.8
CRNKL1-201ENST00000377327 ATP7AQ04656 1500 aa10.04□□□□□ -0.8
CRNKL1-201ENST00000377327 LRRD1A4D1F6 860 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 CCDC160A6NGH7 325 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 RPN1P04843 607 aaKnown RBP10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 NAPAP54920 295 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 BEND6Q5SZJ8 279 aaPredicted RBP10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 CXCR5P32302 372 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 MEX3CQ5U5Q3 659 aaKnown RBP10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 DZIP1Q86YF9 867 aaKnown RBP10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 CRNKL1Q9BZJ0 848 aaKnown RBP10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 SH3TC1Q8TE82 1336 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 HNRNPH1P31943 449 aaKnown RBP10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 CTDSPL2Q05D32 466 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 KRT31Q15323 416 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 ENGASEQ8NFI3 743 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 SAAL1Q96ER3 474 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 AIFM3Q96NN9 605 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 SUGCTQ9HAC7 445 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 C6orf50Q9HD87 102 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 ABHD10Q9NUJ1 306 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 UGGT1Q9NYU2 1555 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 MAST3O60307 1309 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 hCG_1642624A0A1W2PR95 340 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 TARSL2A2RTX5 802 aaKnown RBP10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 CCDC169A6NNP5 214 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 KRIT1O00522 736 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 TEX33O43247 280 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 SMIM24O75264 130 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 IRAK1P51617 712 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 CYP27A1Q02318 531 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 AKNAD1Q5T1N1 836 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 GSPT2Q8IYD1 628 aaKnown RBP10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 WHAMMQ8TF30 809 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 EEF2KMTQ96G04 330 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 KLHL14Q9P2G3 628 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 L1RE1Q9UN81 338 aa10.03□□□□□ -0.8
CRNKL1-201ENST00000377327 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 B4DLN1 442 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 CTNND1O60716 968 aaKnown RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 EHHADHQ08426 723 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 LRRC31Q6UY01 552 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 PROSER2Q86WR7 435 aaPredicted RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 CMTR1Q8N1G2 835 aaKnown RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 FANCBQ8NB91 859 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 MRPL44Q9H9J2 332 aaKnown RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 GPHNQ9NQX3 736 aaPredicted RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.02□□□□□ -0.811e-5■■■■□ 19.8
CRNKL1-201ENST00000377327 TMOD3Q9NYL9 352 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 SRPRBQ9Y5M8 271 aaKnown RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 CDK12Q9NYV4 1490 aaPredicted RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 ANO9A1A5B4 782 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 PLEKHG3A1L390 1219 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 ZRANB2O95218 330 aaKnown RBP eCLIP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 ELF1P32519 619 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 ZBED6P86452 979 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 SLMAPQ14BN4 828 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 LETM2Q2VYF4 491 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 ZNF654Q8IZM8 581 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 RAB3IPQ96QF0 476 aaPredicted RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 SMC6Q96SB8 1091 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 ARMT1Q9H993 441 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 LRWD1Q9UFC0 647 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 RWDD2AQ9UIY3 292 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 EIF3HO15372 352 aaKnown RBP eCLIP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 FLOT1O75955 427 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 BRD2P25440 801 aaKnown RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 GNA11P29992 359 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 RASSF2P50749 326 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 RASSF7Q02833 373 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 PTGDRQ13258 359 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 SYCE1Q8N0S2 351 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 TC2NQ8N9U0 490 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 HELBQ8NG08 1087 aaPredicted RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 RIN2Q8WYP3 895 aaPredicted RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 NHEJ1Q9H9Q4 299 aaPredicted RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 PRDM11Q9NQV5 511 aa10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 INTS9Q9NV88 658 aaKnown RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 IQSEC3Q9UPP2 1182 aaPredicted RBP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.02□□□□□ -0.81
CRNKL1-201ENST00000377327 ZNF532Q9HCE3 1301 aa10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 TMEM110-MUSTN1A8MSY1 372 aa10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 H3BQF6 201 aa10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 TBCAO75347 108 aaKnown RBP10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 STAG1Q8WVM7 1258 aa10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 ARHGEF2Q92974 986 aaKnown RBP10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 KLHL29Q96CT2 875 aa10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 TEX13AQ9BXU3 409 aaPredicted RBP10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 NFU1Q9UMS0 254 aa10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 CTDP1Q9Y5B0 961 aaPredicted RBP10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 IKBKGQ9Y6K9 419 aa10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 ADCY10Q96PN6 1610 aa10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 PTPREP23469 700 aa10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 MRPS25P82663 173 aaKnown RBP10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 STXBP4Q6ZWJ1 553 aa10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 LRRN4CLQ8ND94 238 aa10.01□□□□□ -0.81
CRNKL1-201ENST00000377327 ARMC2Q8NEN0 867 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms