RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 MYO1AQ9UBC5 1043 aa11.42□□□□□ -0.58
USP11-203ENST00000377080 LIMA1Q9UHB6 759 aaKnown RBP11.42□□□□□ -0.58
USP11-203ENST00000377080 KCNJ14Q9UNX9 436 aa11.42□□□□□ -0.58
USP11-203ENST00000377080 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
USP11-203ENST00000377080 MYH14Q7Z406 1995 aaKnown RBP11.41□□□□□ -0.58
USP11-203ENST00000377080 POTEB2H3BUK9 544 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 CALML3P27482 149 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 FMR1Q06787 632 aaKnown RBP eCLIP11.41□□□□□ -0.583e-12■■■■■ 43.2
USP11-203ENST00000377080 ERCC6LQ2NKX8 1250 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 ISM2Q6H9L7 571 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 TMCO3Q6UWJ1 677 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 TMTC3Q6ZXV5 915 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 RSRC2Q7L4I2 434 aaKnown RBP11.41□□□□□ -0.58
USP11-203ENST00000377080 FBXO33Q7Z6M2 555 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 CNGA4Q8IV77 575 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 ENAHQ8N8S7 591 aaPredicted RBP11.41□□□□□ -0.58
USP11-203ENST00000377080 MED15Q96RN5 788 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 INCENPQ9NQS7 918 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 ADD3Q9UEY8 706 aaKnown RBP11.41□□□□□ -0.58
USP11-203ENST00000377080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.41□□□□□ -0.58
USP11-203ENST00000377080 RTCBQ9Y3I0 505 aaKnown RBP11.41□□□□□ -0.58
USP11-203ENST00000377080 LAMB1P07942 1786 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 MAST2Q6P0Q8 1798 aa11.41□□□□□ -0.58
USP11-203ENST00000377080 CCDC88AQ3V6T2 1871 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 SCN7AQ01118 1682 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 PPP1R3GB7ZBB8 358 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 TMEM232C9JQI7 657 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 GTPBP6O43824 516 aaPredicted RBP11.4□□□□□ -0.58
USP11-203ENST00000377080 CRKLP46109 303 aaKnown RBP11.4□□□□□ -0.58
USP11-203ENST00000377080 GNAQP50148 359 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 CLCN6P51797 869 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 ARHGAP29Q52LW3 1261 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 RRP12Q5JTH9 1297 aaKnown RBP11.4□□□□□ -0.58
USP11-203ENST00000377080 TRAPPC3LQ5T215 181 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 IFIT1BQ5T764 474 aaKnown RBP11.4□□□□□ -0.58
USP11-203ENST00000377080 ZNF662Q6ZS27 426 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 RASGRP2Q7LDG7 609 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 PPFIBP1Q86W92 1011 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 TMTC1Q8IUR5 882 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 ANKRD18AQ8IVF6 992 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 HNRNPLLQ8WVV9 542 aaKnown RBP11.4□□□□□ -0.58
USP11-203ENST00000377080 UBXN6Q9BZV1 441 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 ANKRD2Q9GZV1 360 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 SEC31BQ9NQW1 1179 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 ZNF446Q9NWS9 450 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 RWDD2AQ9UIY3 292 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 MRFAP1Q9Y605 127 aa11.4□□□□□ -0.58
USP11-203ENST00000377080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
USP11-203ENST00000377080 LAD1O00515 517 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 FOXN1O15353 648 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 URI1O94763 535 aaPredicted RBP11.39□□□□□ -0.59
USP11-203ENST00000377080 PRR29P0C7W0 189 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 KIF5BP33176 963 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 LONP1P36776 959 aaKnown RBP11.39□□□□□ -0.59
USP11-203ENST00000377080 PPP1R2P41236 205 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 NR5A1Q13285 461 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 BRD3Q15059 726 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 E2F4Q16254 413 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 PFKFB3Q16875 520 aaPredicted RBP11.39□□□□□ -0.59
USP11-203ENST00000377080 TTC38Q5R3I4 469 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 DGKHQ86XP1 1220 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 CERS3Q8IU89 383 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 CEP112Q8N8E3 955 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 ANKRD20A12PQ8NF67 263 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 CTCFLQ8NI51 663 aaPredicted RBP11.39□□□□□ -0.59
USP11-203ENST00000377080 OXER1Q8TDS5 423 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 NUP133Q8WUM0 1156 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 KIFC2Q96AC6 838 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 TOMM22Q9NS69 142 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 ARPP21Q9UBL0 812 aaPredicted RBP11.39□□□□□ -0.59
USP11-203ENST00000377080 TTF2Q9UNY4 1162 aaKnown RBP11.39□□□□□ -0.59
USP11-203ENST00000377080 NIP7Q9Y221 180 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP11-203ENST00000377080 FHOD1Q9Y613 1164 aa11.39□□□□□ -0.59
USP11-203ENST00000377080 V9GY48 417 aaPredicted RBP11.39□□□□□ -0.59
USP11-203ENST00000377080 V9GYY5 206 aaPredicted RBP11.39□□□□□ -0.59
USP11-203ENST00000377080 CNTNAP4Q9C0A0 1308 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 MINDY4BA8MYZ0 360 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 H7C1D1 291 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 SCG2P13521 617 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 SMARCA1P28370 1054 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 GNG11P61952 73 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 GRIN1Q05586 938 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 KCNB1Q14721 858 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 NPY5RQ15761 445 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 ZNF658Q5TYW1 1059 aaPredicted RBP11.38□□□□□ -0.59
USP11-203ENST00000377080 SPTY2D1Q68D10 685 aaPredicted RBP11.38□□□□□ -0.59
USP11-203ENST00000377080 CTR9Q6PD62 1173 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 DAGLBQ8NCG7 672 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 NOC3LQ8WTT2 800 aaKnown RBP11.38□□□□□ -0.59
USP11-203ENST00000377080 SYMPKQ92797 1274 aaKnown RBP11.38□□□□□ -0.59
USP11-203ENST00000377080 ARHGEF1Q92888 912 aaKnown RBP11.38□□□□□ -0.59
USP11-203ENST00000377080 FAM84BQ96KN1 310 aaPredicted RBP11.38□□□□□ -0.59
USP11-203ENST00000377080 LZTS2Q9BRK4 669 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 ZKSCAN3Q9BRR0 538 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 CRNKL1Q9BZJ0 848 aaKnown RBP11.38□□□□□ -0.59
USP11-203ENST00000377080 MAGEF1Q9HAY2 307 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 SAMSN1Q9NSI8 373 aaKnown RBP11.38□□□□□ -0.59
USP11-203ENST00000377080 TCP11L1Q9NUJ3 509 aa11.38□□□□□ -0.59
USP11-203ENST00000377080 PIM2Q9P1W9 311 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms