RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 YWHAEP62258 255 aaKnown RBP15.1■□□□□ 0.01
GPC6-201ENST00000377047 NBPF3Q9H094 633 aa15.1■□□□□ 0.01
GPC6-201ENST00000377047 K7ENM7 598 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 ABL1P00519 1130 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 KLHL30Q0D2K2 578 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 KRT222Q8N1A0 295 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 MED23Q9ULK4 1368 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 SESTD1Q86VW0 696 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 UNC5CLQ8IV45 518 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 TRMT44Q8IYL2 757 aaKnown RBP15.09■□□□□ 0.01
GPC6-201ENST00000377047 FGAP02671 866 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 OSBPP22059 807 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 ALDH3A1P30838 453 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 KCTD2Q14681 263 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 SEPT12Q8IYM1 358 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 IWS1Q96ST2 819 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 NAPGQ99747 312 aaPredicted RBP15.09■□□□□ 0.01
GPC6-201ENST00000377047 ST7Q9NRC1 585 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 GCC2Q8IWJ2 1684 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 ARHGEF5Q12774 1597 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 SEMA3EO15041 775 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 TUBB4BP68371 445 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 ZNF274Q96GC6 653 aaPredicted RBP15.09■□□□□ 0.01
GPC6-201ENST00000377047 ADPGKQ9BRR6 497 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 NFE2L3Q9Y4A8 694 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 RAD17O75943 681 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 DDAH1O94760 285 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 SCG2P13521 617 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 SFMBT2Q5VUG0 894 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 CD2APQ9Y5K6 639 aa15.09■□□□□ 0.01
GPC6-201ENST00000377047 ZNF335Q9H4Z2 1342 aaPredicted RBP15.08■□□□□ 0.01
GPC6-201ENST00000377047 NEK8Q86SG6 692 aa15.08■□□□□ 0.01
GPC6-201ENST00000377047 SECISBP2LQ93073 1101 aaKnown RBP15.08■□□□□ 0.01
GPC6-201ENST00000377047 MMS19Q96T76 1030 aa15.08■□□□□ 0.01
GPC6-201ENST00000377047 UTP11Q9Y3A2 253 aaKnown RBP15.08■□□□□ 0.01
GPC6-201ENST00000377047 BLMP54132 1417 aaPredicted RBP15.08■□□□□ 0.01
GPC6-201ENST00000377047 POLGP54098 1239 aaPredicted RBP15.08■□□□□ 0
GPC6-201ENST00000377047 KDM5CP41229 1560 aa15.08■□□□□ 0
GPC6-201ENST00000377047 ZEB2O60315 1214 aa15.08■□□□□ 0
GPC6-201ENST00000377047 TNNC2P02585 160 aa15.08■□□□□ 0
GPC6-201ENST00000377047 ITIH3Q06033 890 aa15.08■□□□□ 0
GPC6-201ENST00000377047 NOSTRINQ8IVI9 506 aa15.08■□□□□ 0
GPC6-201ENST00000377047 PRAMEF22A3QJZ6 481 aa15.07■□□□□ 0
GPC6-201ENST00000377047 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
GPC6-201ENST00000377047 FAM160B1Q5W0V3 765 aa15.07■□□□□ 0
GPC6-201ENST00000377047 TMC4Q7Z404 712 aa15.07■□□□□ 0
GPC6-201ENST00000377047 LSM14BQ9BX40 385 aaKnown RBP15.07■□□□□ 0
GPC6-201ENST00000377047 CBX8Q9HC52 389 aa15.07■□□□□ 0
GPC6-201ENST00000377047 ADD1P35611 737 aaKnown RBP15.07■□□□□ 0
GPC6-201ENST00000377047 FAM207AQ9NSI2 230 aaPredicted RBP15.07■□□□□ 0
GPC6-201ENST00000377047 PANK4Q9NVE7 773 aa15.07■□□□□ 0
GPC6-201ENST00000377047 STIM2Q9P246 746 aa15.07■□□□□ 0
GPC6-201ENST00000377047 SWAP70Q9UH65 585 aa15.07■□□□□ 0
GPC6-201ENST00000377047 BBOX1O75936 387 aa15.07■□□□□ 0
GPC6-201ENST00000377047 CCNA1P78396 465 aa15.07■□□□□ 0
GPC6-201ENST00000377047 PPP2R3AQ06190 1150 aa15.07■□□□□ 0
GPC6-201ENST00000377047 IFRD2Q12894 506 aaPredicted RBP15.07■□□□□ 0
GPC6-201ENST00000377047 SUPT20HL1Q3ZLR7 823 aa15.07■□□□□ 0
GPC6-201ENST00000377047 CEP128Q6ZU80 1094 aa15.07■□□□□ 0
GPC6-201ENST00000377047 TRIM31Q9BZY9 425 aa15.07■□□□□ 0
GPC6-201ENST00000377047 HAUS2Q9NVX0 235 aa15.07■□□□□ 0
GPC6-201ENST00000377047 PNMA2Q9UL42 364 aa15.07■□□□□ 0
GPC6-201ENST00000377047 PCDHA1Q9Y5I3 950 aa15.07■□□□□ 0
GPC6-201ENST00000377047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.07■□□□□ 0
GPC6-201ENST00000377047 ZBTB24O43167 697 aaPredicted RBP15.07■□□□□ 0
GPC6-201ENST00000377047 CIAO1O76071 339 aa15.07■□□□□ 0
GPC6-201ENST00000377047 GDF11O95390 407 aa15.07■□□□□ 0
GPC6-201ENST00000377047 GNA14O95837 355 aa15.07■□□□□ 0
GPC6-201ENST00000377047 OR52Z1P0C646 297 aa15.07■□□□□ 0
GPC6-201ENST00000377047 DALRD3Q5D0E6 543 aaKnown RBP15.07■□□□□ 0
GPC6-201ENST00000377047 C8orf74Q6P047 294 aa15.07■□□□□ 0
GPC6-201ENST00000377047 CPLX4Q7Z7G2 160 aa15.07■□□□□ 0
GPC6-201ENST00000377047 TM6SF1Q9BZW5 370 aa15.07■□□□□ 0
GPC6-201ENST00000377047 ATP10DQ9P241 1426 aa15.07■□□□□ 0
GPC6-201ENST00000377047 ACTN4O43707 911 aaKnown RBP15.07■□□□□ 0
GPC6-201ENST00000377047 TMOD1P28289 359 aa15.07■□□□□ 0
GPC6-201ENST00000377047 CLUL1Q15846 466 aa15.07■□□□□ 0
GPC6-201ENST00000377047 CCDC93Q567U6 631 aa15.07■□□□□ 0
GPC6-201ENST00000377047 ARMC9Q7Z3E5 817 aa15.07■□□□□ 0
GPC6-201ENST00000377047 KRT26Q7Z3Y9 468 aa15.07■□□□□ 0
GPC6-201ENST00000377047 IPO4Q8TEX9 1081 aaKnown RBP15.07■□□□□ 0
GPC6-201ENST00000377047 TBC1D31Q96DN5 1066 aa15.07■□□□□ 0
GPC6-201ENST00000377047 ROBO2Q9HCK4 1378 aa15.07■□□□□ 0
GPC6-201ENST00000377047 MYOCDQ8IZQ8 938 aa15.06■□□□□ 0
GPC6-201ENST00000377047 GABPB2Q8TAK5 448 aaPredicted RBP15.06■□□□□ 0
GPC6-201ENST00000377047 NLRC4Q9NPP4 1024 aa15.06■□□□□ 0
GPC6-201ENST00000377047 NRBP2Q9NSY0 501 aa15.06■□□□□ 0
GPC6-201ENST00000377047 SRP68Q9UHB9 627 aaKnown RBP15.06■□□□□ 0
GPC6-201ENST00000377047 RSPH14Q9UHP6 348 aa15.06■□□□□ 0
GPC6-201ENST00000377047 ANAPC4Q9UJX5 808 aa15.06■□□□□ 0
GPC6-201ENST00000377047 GADD45BO75293 160 aaPredicted RBP15.06■□□□□ 0
GPC6-201ENST00000377047 MAGEA1P43355 309 aa15.06■□□□□ 0
GPC6-201ENST00000377047 DYNLL1P63167 89 aaKnown RBP15.06■□□□□ 0
GPC6-201ENST00000377047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.06■□□□□ 0
GPC6-201ENST00000377047 VPS18Q9P253 973 aa15.06■□□□□ 0
GPC6-201ENST00000377047 LRRIQ4A6NIV6 560 aa15.06■□□□□ 0
GPC6-201ENST00000377047 UBXN2AP68543 259 aa15.06■□□□□ 0
GPC6-201ENST00000377047 KCTD1Q719H9 257 aa15.06■□□□□ 0
GPC6-201ENST00000377047 RRAGAQ7L523 313 aa15.06■□□□□ 0
GPC6-201ENST00000377047 NKIRAS1Q9NYS0 192 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms