RNA–Protein interactions for RNA: ENST00000377036.2

DFFA-201, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene DFFA, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-201ENST00000377036 VCAM1P19320 739 aa20.1■□□□□ 0.81
DFFA-201ENST00000377036 SMARCA1P28370 1054 aa20.1■□□□□ 0.81
DFFA-201ENST00000377036 GJA5P36382 358 aa20.1■□□□□ 0.81
DFFA-201ENST00000377036 ANP32AP39687 249 aaKnown RBP20.1■□□□□ 0.81
DFFA-201ENST00000377036 ZNF543Q08ER8 600 aa20.1■□□□□ 0.81
DFFA-201ENST00000377036 SREBF2Q12772 1141 aa20.1■□□□□ 0.81
DFFA-201ENST00000377036 BECN1Q14457 450 aa20.1■□□□□ 0.81
DFFA-201ENST00000377036 ZYXQ15942 572 aaKnown RBP20.1■□□□□ 0.81
DFFA-201ENST00000377036 CCDC96Q2M329 555 aa20.1■□□□□ 0.81
DFFA-201ENST00000377036 CHURC1Q8WUH1 139 aa20.1■□□□□ 0.81
DFFA-201ENST00000377036 SLC45A1Q9Y2W3 748 aa20.1■□□□□ 0.81
DFFA-201ENST00000377036 CDKL5O76039 1030 aa20.09■□□□□ 0.81
DFFA-201ENST00000377036 C1QTNF8P60827 252 aa20.09■□□□□ 0.81
DFFA-201ENST00000377036 PAXIP1Q6ZW49 1069 aaPredicted RBP20.09■□□□□ 0.81
DFFA-201ENST00000377036 FAM160B2Q86V87 743 aa20.09■□□□□ 0.81
DFFA-201ENST00000377036 SPICE1Q8N0Z3 855 aa20.09■□□□□ 0.81
DFFA-201ENST00000377036 MS4A4AQ96JQ5 239 aa20.09■□□□□ 0.81
DFFA-201ENST00000377036 ZCCHC17Q9NP64 241 aaKnown RBP20.09■□□□□ 0.81
DFFA-201ENST00000377036 FEM1BQ9UK73 627 aa20.09■□□□□ 0.81
DFFA-201ENST00000377036 AGTPBP1Q9UPW5 1226 aa20.09■□□□□ 0.81
DFFA-201ENST00000377036 PALM3A6NDB9 673 aaPredicted RBP20.08■□□□□ 0.8
DFFA-201ENST00000377036 USP17L15C9J2P7 530 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 USP17L13C9JLJ4 530 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 USP17L11C9JVI0 530 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 USP17L18D6R9N7 530 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 USP17L22D6RA61 530 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 USP17L17D6RBQ6 530 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 USP17L19D6RCP7 530 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 USP17L20D6RJB6 530 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 CPLX1O14810 134 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 HOXA7P31268 230 aaPredicted RBP20.08■□□□□ 0.8
DFFA-201ENST00000377036 USP17L24Q0WX57 530 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 OTUD7BQ6GQQ9 843 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 GADL1Q6ZQY3 521 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 ISY1Q9ULR0 285 aaKnown RBP20.08■□□□□ 0.8
DFFA-201ENST00000377036 HPS5Q9UPZ3 1129 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 MTMR7Q9Y216 660 aa20.08■□□□□ 0.8
DFFA-201ENST00000377036 CCL15-CCL14A0A0B4J2E2 113 aa20.07■□□□□ 0.8
DFFA-201ENST00000377036 TESPA1A2RU30 521 aaPredicted RBP20.07■□□□□ 0.8
DFFA-201ENST00000377036 FAM155AB1AL88 458 aaPredicted RBP20.07■□□□□ 0.8
DFFA-201ENST00000377036 K7ELQ4 463 aaPredicted RBP20.07■□□□□ 0.8
DFFA-201ENST00000377036 FDX1P10109 184 aa20.07■□□□□ 0.8
DFFA-201ENST00000377036 HSPA6P17066 643 aa20.07■□□□□ 0.8
DFFA-201ENST00000377036 STAT2P52630 851 aa20.07■□□□□ 0.8
DFFA-201ENST00000377036 CCL15Q16663 113 aa20.07■□□□□ 0.8
DFFA-201ENST00000377036 ME3Q16798 604 aa20.07■□□□□ 0.8
DFFA-201ENST00000377036 FAM83BQ5T0W9 1011 aa20.07■□□□□ 0.8
DFFA-201ENST00000377036 NOL8Q76FK4 1167 aaKnown RBP20.07■□□□□ 0.8
DFFA-201ENST00000377036 CAPNS2Q96L46 248 aa20.07■□□□□ 0.8
DFFA-201ENST00000377036 MYL10Q9BUA6 226 aa20.07■□□□□ 0.8
DFFA-201ENST00000377036 RPAP3Q9H6T3 665 aaPredicted RBP20.07■□□□□ 0.8
DFFA-201ENST00000377036 RBM27Q9P2N5 1060 aaKnown RBP20.07■□□□□ 0.8
DFFA-201ENST00000377036 MAD2L2Q9UI95 211 aa20.07■□□□□ 0.8
DFFA-201ENST00000377036 PNMA3Q9UL41 463 aa20.07■□□□□ 0.8
DFFA-201ENST00000377036 MYPNQ86TC9 1320 aa20.06■□□□□ 0.8
DFFA-201ENST00000377036 KLRF2D3W0D1 207 aa20.06■□□□□ 0.8
DFFA-201ENST00000377036 BTNL9Q6UXG8 535 aa20.06■□□□□ 0.8
DFFA-201ENST00000377036 ANKRD23Q86SG2 305 aa20.06■□□□□ 0.8
DFFA-201ENST00000377036 GTF3C6Q969F1 213 aa20.06■□□□□ 0.8
DFFA-201ENST00000377036 TMX3Q96JJ7 454 aa20.06■□□□□ 0.8
DFFA-201ENST00000377036 TANGO6Q9C0B7 1094 aa20.06■□□□□ 0.8
DFFA-201ENST00000377036 HOXC10Q9NYD6 342 aa20.06■□□□□ 0.8
DFFA-201ENST00000377036 TMEM232C9JQI7 657 aa20.05■□□□□ 0.8
DFFA-201ENST00000377036 OSBPP22059 807 aa20.05■□□□□ 0.8
DFFA-201ENST00000377036 IKQ13123 557 aaPredicted RBP20.05■□□□□ 0.8
DFFA-201ENST00000377036 PRPF38AQ8NAV1 312 aaKnown RBP20.05■□□□□ 0.8
DFFA-201ENST00000377036 GTF3C2Q8WUA4 911 aaPredicted RBP20.05■□□□□ 0.8
DFFA-201ENST00000377036 LARP6Q9BRS8 491 aaKnown RBP20.05■□□□□ 0.8
DFFA-201ENST00000377036 LLPHQ9BRT6 129 aaKnown RBP20.05■□□□□ 0.8
DFFA-201ENST00000377036 PNMA2Q9UL42 364 aa20.05■□□□□ 0.8
DFFA-201ENST00000377036 CD2BP2O95400 341 aaKnown RBP20.04■□□□□ 0.8
DFFA-201ENST00000377036 MAP2K2P36507 400 aa20.04■□□□□ 0.8
DFFA-201ENST00000377036 IRX3P78415 501 aaPredicted RBP20.04■□□□□ 0.8
DFFA-201ENST00000377036 MKRN3Q13064 507 aaKnown RBP20.04■□□□□ 0.8
DFFA-201ENST00000377036 COG2Q14746 738 aa20.04■□□□□ 0.8
DFFA-201ENST00000377036 KIAA1755Q5JYT7 1200 aa20.04■□□□□ 0.8
DFFA-201ENST00000377036 CATSPERGQ6ZRH7 1159 aa20.04■□□□□ 0.8
DFFA-201ENST00000377036 TMTC3Q6ZXV5 915 aa20.04■□□□□ 0.8
DFFA-201ENST00000377036 KCTD1Q719H9 257 aa20.04■□□□□ 0.8
DFFA-201ENST00000377036 BRI3BPQ8WY22 251 aa20.04■□□□□ 0.8
DFFA-201ENST00000377036 SLF1Q9BQI6 1058 aa20.04■□□□□ 0.8
DFFA-201ENST00000377036 SPZ1Q9BXG8 430 aa20.04■□□□□ 0.8
DFFA-201ENST00000377036 GPCPD1Q9NPB8 672 aa20.04■□□□□ 0.8
DFFA-201ENST00000377036 TSHZ2Q9NRE2 1034 aa20.04■□□□□ 0.8
DFFA-201ENST00000377036 FRMPD2Q68DX3 1309 aaPredicted RBP20.03■□□□□ 0.8
DFFA-201ENST00000377036 FLOT1O75955 427 aa20.03■□□□□ 0.8
DFFA-201ENST00000377036 RXRAP19793 462 aa20.03■□□□□ 0.8
DFFA-201ENST00000377036 CCT2P78371 535 aaKnown RBP20.03■□□□□ 0.8
DFFA-201ENST00000377036 SCRN1Q12765 414 aa20.03■□□□□ 0.8
DFFA-201ENST00000377036 TRAF1Q13077 416 aa20.03■□□□□ 0.8
DFFA-201ENST00000377036 STK3Q13188 491 aa20.03■□□□□ 0.8
DFFA-201ENST00000377036 MOGSQ13724 837 aa20.03■□□□□ 0.8
DFFA-201ENST00000377036 CYP4F22Q6NT55 531 aa20.03■□□□□ 0.8
DFFA-201ENST00000377036 CCDC144CPQ8IYA2 1237 aa20.03■□□□□ 0.8
DFFA-201ENST00000377036 TRIM22Q8IYM9 498 aa20.03■□□□□ 0.8
DFFA-201ENST00000377036 NUP88Q99567 741 aaPredicted RBP20.03■□□□□ 0.8
DFFA-201ENST00000377036 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.03■□□□□ 0.8
DFFA-201ENST00000377036 PHIPQ8WWQ0 1821 aa20.03■□□□□ 0.8
DFFA-201ENST00000377036 ALDH1A1P00352 501 aa20.02■□□□□ 0.8
DFFA-201ENST00000377036 IFNAR1P17181 557 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms