RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 SRRTQ9BXP5 876 aaKnown RBP20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 COA1Q9GZY4 146 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 TSPYL1Q9H0U9 437 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 CEP170BQ9Y4F5 1589 aaPredicted RBP20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 GAS7O60861 476 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 HS1BP3Q53T59 392 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 CSRNP2Q9H175 543 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 KRT86O43790 486 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 TTLL1O95922 423 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 KRT9P35527 623 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 SEPT7Q16181 437 aaKnown RBP20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 SPATA31D1Q6ZQQ2 1576 aa20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 OR52Z1P0C646 297 aa20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 KRBA2Q6ZNG9 492 aa20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 IMPG2Q9BZV3 1241 aa20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 IQGAP1P46940 1657 aa20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 RRAGDQ9NQL2 400 aaPredicted RBP20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 NEDD4P46934 1319 aa20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 SPDYE4A6NLX3 237 aa20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 ZNF34Q8IZ26 560 aa20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 IL25Q9H293 177 aa20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 CSADQ9Y600 493 aa20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 IVNS1ABPQ9Y6Y0 642 aa20.09■□□□□ 0.81
PTPDC1-202ENST00000375360 H0YHG0 523 aa20.08■□□□□ 0.81
PTPDC1-202ENST00000375360 KRT83P78385 493 aa20.08■□□□□ 0.81
PTPDC1-202ENST00000375360 CCDC93Q567U6 631 aa20.08■□□□□ 0.81
PTPDC1-202ENST00000375360 FRMD4BQ9Y2L6 1034 aa20.08■□□□□ 0.81
PTPDC1-202ENST00000375360 TACC1O75410 805 aa20.08■□□□□ 0.81
PTPDC1-202ENST00000375360 NEBLO76041 1014 aa20.08■□□□□ 0.81
PTPDC1-202ENST00000375360 LINC00301Q8NCQ3 95 aa20.08■□□□□ 0.81
PTPDC1-202ENST00000375360 EHBP1Q8NDI1 1231 aa20.08■□□□□ 0.81
PTPDC1-202ENST00000375360 SYNCQ9H7C4 482 aa20.08■□□□□ 0.81
PTPDC1-202ENST00000375360 TDRD3Q9H7E2 651 aaKnown RBP20.08■□□□□ 0.81
PTPDC1-202ENST00000375360 BIRC3Q13489 604 aa20.08■□□□□ 0.8
PTPDC1-202ENST00000375360 LONRF3Q496Y0 759 aa20.08■□□□□ 0.8
PTPDC1-202ENST00000375360 SMCR8Q8TEV9 937 aaPredicted RBP20.08■□□□□ 0.8
PTPDC1-202ENST00000375360 TMEM131LA2VDJ0 1609 aa20.08■□□□□ 0.8
PTPDC1-202ENST00000375360 ANKRD62A6NC57 917 aa20.08■□□□□ 0.8
PTPDC1-202ENST00000375360 GCNT3O95395 438 aa20.08■□□□□ 0.8
PTPDC1-202ENST00000375360 GRAMD1CQ8IYS0 662 aa20.08■□□□□ 0.8
PTPDC1-202ENST00000375360 HOOK2Q96ED9 719 aa20.08■□□□□ 0.8
PTPDC1-202ENST00000375360 DCP1AQ9NPI6 582 aaPredicted RBP20.08■□□□□ 0.8
PTPDC1-202ENST00000375360 FANCLQ9NW38 375 aa20.08■□□□□ 0.8
PTPDC1-202ENST00000375360 NOP56O00567 594 aaKnown RBP20.07■□□□□ 0.8
PTPDC1-202ENST00000375360 GJC1P36383 396 aa20.07■□□□□ 0.8
PTPDC1-202ENST00000375360 KIF2CQ99661 725 aa20.07■□□□□ 0.8
PTPDC1-202ENST00000375360 GSG1L2A8MUP6 293 aa20.07■□□□□ 0.8
PTPDC1-202ENST00000375360 ADRA2BP18089 450 aa20.07■□□□□ 0.8
PTPDC1-202ENST00000375360 CCDC122Q5T0U0 273 aa20.07■□□□□ 0.8
PTPDC1-202ENST00000375360 KANSL2Q9H9L4 492 aa20.07■□□□□ 0.8
PTPDC1-202ENST00000375360 MAP9Q49MG5 647 aa20.07■□□□□ 0.8
PTPDC1-202ENST00000375360 MRPL44Q9H9J2 332 aaKnown RBP20.07■□□□□ 0.8
PTPDC1-202ENST00000375360 RCOR1Q9UKL0 485 aa20.07■□□□□ 0.8
PTPDC1-202ENST00000375360 ERICH4A6NGS2 130 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 TMEM110-MUSTN1A8MSY1 372 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 GTPBP4Q9BZE4 634 aaKnown RBP20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 FOXP1Q9H334 677 aaPredicted RBP20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 BCCIPQ9P287 314 aaKnown RBP eCLIP20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 PI4KBQ9UBF8 816 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 CTAGE15A4D2H0 777 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 CTAGE8P0CG41 777 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 GPSM2P81274 684 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 GPATCH4Q5T3I0 446 aaKnown RBP20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 DPY19L2Q6NUT2 758 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 CTAGE6Q86UF2 777 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 SULF1Q8IWU6 871 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 CTAGE4Q8IX94 777 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 AMNQ9BXJ7 453 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 PCDHB6Q9Y5E3 794 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 CD163L1Q9NR16 1453 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 CTAGE9A4FU28 777 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 EPB41P11171 864 aaKnown RBP20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 LRMPQ12912 555 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 KAZALD1Q96I82 304 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 DDX25Q9UHL0 483 aaKnown RBP20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 VWDEQ8N2E2 1590 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 MMP1P03956 469 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 STOX1Q6ZVD7 989 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 PCDHB13Q9Y5F0 798 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 MROH2AA6NES4 1674 aa20.06■□□□□ 0.8
PTPDC1-202ENST00000375360 SMTNP53814 917 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 ADKP55263 362 aaKnown RBP20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 RESTQ13127 1097 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 NAA15Q9BXJ9 866 aaKnown RBP20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 FAM207AQ9NSI2 230 aaPredicted RBP20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 CHRNA5P30532 468 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 SNAP25P60880 206 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 IFFO1Q0D2I5 559 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 PTPN21Q16825 1174 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 DCAF15Q66K64 600 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 RIMS1Q86UR5 1692 aaKnown RBP20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 GPBP1Q86WP2 473 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 TBCKQ8TEA7 893 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 TTC14Q96N46 770 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 SLC39A2Q9NP94 309 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 CCPG1Q9ULG6 757 aa20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 GCOM1H8Y6P7 765 aaPredicted RBP20.05■□□□□ 0.8
PTPDC1-202ENST00000375360 POLR2MP0CAP2 368 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms