RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 TRMT1LQ7Z2T5 733 aaKnown RBP5.2□□□□□ -1.58
PCDH11X-204ENST00000373088 FOXP4Q8IVH2 680 aaPredicted RBP5.2□□□□□ -1.58
PCDH11X-204ENST00000373088 KIFC2Q96AC6 838 aa5.2□□□□□ -1.58
PCDH11X-204ENST00000373088 ZDHHC15Q96MV8 337 aa5.2□□□□□ -1.58
PCDH11X-204ENST00000373088 TMEM39BQ9GZU3 492 aa5.2□□□□□ -1.58
PCDH11X-204ENST00000373088 CSRNP2Q9H175 543 aa5.2□□□□□ -1.58
PCDH11X-204ENST00000373088 KANSL2Q9H9L4 492 aa5.2□□□□□ -1.58
PCDH11X-204ENST00000373088 SERTAD1Q9UHV2 236 aa5.2□□□□□ -1.58
PCDH11X-204ENST00000373088 YDJCA8MPS7 323 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 H7C1D1 291 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 TXKP42681 527 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 RASSF7Q02833 373 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 TTLL12Q14166 644 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 NONOQ15233 471 aaKnown RBP eCLIP5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 SHROOM1Q2M3G4 852 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 WWC2Q6AWC2 1192 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 DTHD1Q6ZMT9 781 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 SAMD7Q7Z3H4 446 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 GRAMD1CQ8IYS0 662 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 REXO1Q8N1G1 1221 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 SMARCE1Q969G3 411 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 NAP1L5Q96NT1 182 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 ZHX3Q9H4I2 956 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 CBX8Q9HC52 389 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 ARHGEF10LQ9HCE6 1279 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 TCP11L1Q9NUJ3 509 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 SERPINA10Q9UK55 444 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 GAKO14976 1311 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 ESPNB1AK53 854 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 USP17L10C9JJH3 530 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 BMP15O95972 392 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 ADCY7P51828 1080 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 RCAN1P53805 252 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 PKN1Q16512 942 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 PPP4R3BQ5MIZ7 849 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 CPXCR1Q8N123 301 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 EPSTI1Q96J88 318 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 ZNF70Q9UC06 446 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 CCDC39Q9UFE4 941 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 PCDHA4Q9UN74 947 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 PCDHA1Q9Y5I3 950 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 U2AF2P26368 475 aaKnown RBP eCLIP5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 LMOD1P29536 600 aaPredicted RBP5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 MRPL12P52815 198 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 GRIN1Q05586 938 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 UBE2SQ16763 222 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 NBPF9Q3BBW0 867 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 CUL5Q93034 780 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 MAD2L2Q9UI95 211 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 CNTNAP5Q8WYK1 1306 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 THSD7AQ9UPZ6 1657 aa5.19□□□□□ -1.58
PCDH11X-204ENST00000373088 COL4A1P02462 1669 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 A0A1W2PQ27 194 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 A0A1W2PQ64 194 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 A0A1W2PQD8 194 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 F5H6K3 240 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 PDHBP11177 359 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 SHMT1P34896 483 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 STAT6P42226 847 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 STX17P56962 302 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 KLRC3Q07444 240 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 LONRF3Q496Y0 759 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 ASPRV1Q53RT3 343 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 EARS2Q5JPH6 523 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 USP49Q70CQ1 688 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 CCDC47Q96A33 483 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 PSTPIP2Q9H939 334 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 KIAA1468Q9P260 1216 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 FAM198AQ9UFP1 575 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 MKRN1Q9UHC7 482 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 NHSQ6T4R5 1651 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 NRDCO43847 1150 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 IGSF3O75054 1194 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 PPP6R2O75170 966 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 CFBP00751 764 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 TGFB2P61812 414 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 RASA3Q14644 834 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 UVSSAQ2YD98 709 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 SHC4Q6S5L8 630 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 TMEM179Q6ZVK1 233 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 KRT25Q7Z3Z0 450 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 MICALL2Q8IY33 904 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 TBCKQ8TEA7 893 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 SYMPKQ92797 1274 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 PHF20Q9BVI0 1012 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 BLZF1Q9H2G9 400 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 HOMER2Q9NSB8 354 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 TMEM260Q9NX78 707 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 MYH3P11055 1940 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 GOLGB1Q14789 3259 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 MYO3BQ8WXR4 1341 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 IRS2Q9Y4H2 1338 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 SHTN1A0MZ66 631 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 SPDYE3A6NKU9 549 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 KRT18P05783 430 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 IDEP14735 1019 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 CASP1P29466 404 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 TECP42680 631 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 TMEM266Q2M3C6 531 aa5.18□□□□□ -1.58
PCDH11X-204ENST00000373088 GPATCH4Q5T3I0 446 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms