RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 SNHG28P0DPA3 235 aa24.1■■□□□ 1.45
TSC22D3-205ENST00000372390 KLRC3Q07444 240 aa24.1■■□□□ 1.45
TSC22D3-205ENST00000372390 SLC35G1Q2M3R5 365 aa24.1■■□□□ 1.45
TSC22D3-205ENST00000372390 NBPF11Q86T75 865 aa24.1■■□□□ 1.45
TSC22D3-205ENST00000372390 SMARCC2Q8TAQ2 1214 aa24.1■■□□□ 1.45
TSC22D3-205ENST00000372390 NUP88Q99567 741 aaPredicted RBP24.1■■□□□ 1.45
TSC22D3-205ENST00000372390 PALM3A6NDB9 673 aaPredicted RBP24.09■■□□□ 1.45
TSC22D3-205ENST00000372390 GJB2P29033 226 aa24.09■■□□□ 1.45
TSC22D3-205ENST00000372390 C1QTNF8P60827 252 aa24.09■■□□□ 1.45
TSC22D3-205ENST00000372390 SLFN13Q68D06 897 aa24.09■■□□□ 1.45
TSC22D3-205ENST00000372390 TMTC3Q6ZXV5 915 aa24.09■■□□□ 1.45
TSC22D3-205ENST00000372390 SPICE1Q8N0Z3 855 aa24.09■■□□□ 1.45
TSC22D3-205ENST00000372390 SRBD1Q8N5C6 995 aaKnown RBP24.09■■□□□ 1.45
TSC22D3-205ENST00000372390 WNK4Q96J92 1243 aa24.09■■□□□ 1.45
TSC22D3-205ENST00000372390 MAP3K14Q99558 947 aa24.09■■□□□ 1.45
TSC22D3-205ENST00000372390 MYH6P13533 1939 aa24.09■■□□□ 1.45
TSC22D3-205ENST00000372390 DHX16O60231 1041 aaKnown RBP24.08■■□□□ 1.45
TSC22D3-205ENST00000372390 ZBTB48P10074 688 aaPredicted RBP24.08■■□□□ 1.45
TSC22D3-205ENST00000372390 FUT2Q10981 343 aa24.08■■□□□ 1.45
TSC22D3-205ENST00000372390 PAXIP1Q6ZW49 1069 aaPredicted RBP24.08■■□□□ 1.45
TSC22D3-205ENST00000372390 GMCL1P1Q8NEA9 526 aa24.08■■□□□ 1.45
TSC22D3-205ENST00000372390 LLPHQ9BRT6 129 aaKnown RBP24.08■■□□□ 1.45
TSC22D3-205ENST00000372390 GPCPD1Q9NPB8 672 aa24.08■■□□□ 1.45
TSC22D3-205ENST00000372390 RBM28Q9NW13 759 aaKnown RBP24.08■■□□□ 1.45
TSC22D3-205ENST00000372390 SYNPO2Q9UMS6 1093 aa24.08■■□□□ 1.45
TSC22D3-205ENST00000372390 TRIM75PA6NK02 468 aa24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 PARP1P09874 1014 aaKnown RBP24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 FDPSP14324 419 aaKnown RBP24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 SPP2Q13103 211 aa24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 KCTD1Q719H9 257 aa24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 RASAL3Q86YV0 1011 aa24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 AFG3L2Q9Y4W6 797 aa24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 CCDC196A0A1B0GTZ2 297 aa24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 USP17L10C9JJH3 530 aa24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 KIF5BP33176 963 aa24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 CCDC96Q2M329 555 aa24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 TTBK2Q6IQ55 1244 aa24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 CCDC102AQ96A19 550 aa24.07■■□□□ 1.44
TSC22D3-205ENST00000372390 RASSF10A6NK89 507 aa24.06■■□□□ 1.44
TSC22D3-205ENST00000372390 IRF6O14896 467 aa24.06■■□□□ 1.44
TSC22D3-205ENST00000372390 SLC10A3P09131 477 aa24.06■■□□□ 1.44
TSC22D3-205ENST00000372390 IFNAR1P17181 557 aa24.06■■□□□ 1.44
TSC22D3-205ENST00000372390 DDIT3P35638 169 aa24.06■■□□□ 1.44
TSC22D3-205ENST00000372390 USP14P54578 494 aa24.06■■□□□ 1.44
TSC22D3-205ENST00000372390 ZNF543Q08ER8 600 aa24.06■■□□□ 1.44
TSC22D3-205ENST00000372390 MTMR2Q13614 643 aa24.06■■□□□ 1.44
TSC22D3-205ENST00000372390 SPRYD7Q5W111 196 aa24.06■■□□□ 1.44
TSC22D3-205ENST00000372390 VCPKMTQ9H867 229 aa24.06■■□□□ 1.44
TSC22D3-205ENST00000372390 PTPRFP10586 1907 aa24.06■■□□□ 1.44
TSC22D3-205ENST00000372390 hCG_1642624A0A1W2PR95 340 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 KLRF2D3W0D1 207 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 PPP2R5BQ15173 497 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 SLC26A6Q9BXS9 759 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 UBA5Q9GZZ9 404 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 KIAA1683Q9H0B3 1180 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 GOPCQ9HD26 462 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 ISY1Q9ULR0 285 aaKnown RBP24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 KCNH4Q9UQ05 1017 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 CNTNAP5Q8WYK1 1306 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 CXCL11O14625 94 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 GJA5P36382 358 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 SLC1A4P43007 532 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 BACE1P56817 501 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 DEFB115Q30KQ5 88 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 DCAF4Q8WV16 495 aa24.05■■□□□ 1.44
TSC22D3-205ENST00000372390 C19orf81C9J6K1 198 aa24.04■■□□□ 1.44
TSC22D3-205ENST00000372390 CYTH3O43739 400 aa24.04■■□□□ 1.44
TSC22D3-205ENST00000372390 SNAPC2Q13487 334 aa24.04■■□□□ 1.44
TSC22D3-205ENST00000372390 ASPRV1Q53RT3 343 aa24.04■■□□□ 1.44
TSC22D3-205ENST00000372390 CPLX2Q6PUV4 134 aaKnown RBP24.04■■□□□ 1.44
TSC22D3-205ENST00000372390 PIBF1Q8WXW3 757 aa24.04■■□□□ 1.44
TSC22D3-205ENST00000372390 GMCL1Q96IK5 515 aa24.04■■□□□ 1.44
TSC22D3-205ENST00000372390 ORC3Q9UBD5 711 aaPredicted RBP24.04■■□□□ 1.44
TSC22D3-205ENST00000372390 HSPA6P17066 643 aa24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 SLC16A2P36021 539 aa24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 FOSBP53539 338 aa24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 MKRN3Q13064 507 aaKnown RBP24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 AIFM3Q96NN9 605 aa24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 EMILIN3Q9NT22 766 aa24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 CDKL5O76039 1030 aa24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 FMNL1O95466 1100 aaPredicted RBP24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 GTF2A2P52657 109 aa24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 SSRP1Q08945 709 aaKnown RBP24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 PKP1Q13835 747 aa24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 FAM83BQ5T0W9 1011 aa24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 TMOD4Q9NZQ9 345 aa24.03■■□□□ 1.44
TSC22D3-205ENST00000372390 BMP3P12645 472 aa24.02■■□□□ 1.44
TSC22D3-205ENST00000372390 HMGCS2P54868 508 aa24.02■■□□□ 1.44
TSC22D3-205ENST00000372390 LPAR1Q92633 364 aa24.02■■□□□ 1.44
TSC22D3-205ENST00000372390 CWC22Q9HCG8 908 aaKnown RBP24.02■■□□□ 1.44
TSC22D3-205ENST00000372390 A0A0G2JLL6 359 aaPredicted RBP24.01■■□□□ 1.43
TSC22D3-205ENST00000372390 GNAQP50148 359 aa24.01■■□□□ 1.43
TSC22D3-205ENST00000372390 HMGN5P82970 282 aaKnown RBP24.01■■□□□ 1.43
TSC22D3-205ENST00000372390 CYP4F22Q6NT55 531 aa24.01■■□□□ 1.43
TSC22D3-205ENST00000372390 PRRT2Q7Z6L0 340 aaPredicted RBP24.01■■□□□ 1.43
TSC22D3-205ENST00000372390 V9GY48 417 aaPredicted RBP24.01■■□□□ 1.43
TSC22D3-205ENST00000372390 GRM1Q13255 1194 aa24■■□□□ 1.43
TSC22D3-205ENST00000372390 GPATCH4Q5T3I0 446 aaKnown RBP24■■□□□ 1.43
TSC22D3-205ENST00000372390 VAT1LQ9HCJ6 419 aa24■■□□□ 1.43
TSC22D3-205ENST00000372390 GJB4Q9NTQ9 266 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms