RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 ORC2Q13416 577 aaPredicted RBP20.51■□□□□ 0.87
CD40-201ENST00000372276 PIK3AP1Q6ZUJ8 805 aa20.51■□□□□ 0.87
CD40-201ENST00000372276 DPF2Q92785 391 aa20.51■□□□□ 0.87
CD40-201ENST00000372276 EPSTI1Q96J88 318 aa20.51■□□□□ 0.87
CD40-201ENST00000372276 NAA15Q9BXJ9 866 aaKnown RBP20.51■□□□□ 0.87
CD40-201ENST00000372276 PODXL2Q9NZ53 605 aa20.51■□□□□ 0.87
CD40-201ENST00000372276 NAV1Q8NEY1 1877 aa20.5■□□□□ 0.87
CD40-201ENST00000372276 TNRC6CQ9HCJ0 1690 aaKnown RBP20.5■□□□□ 0.87
CD40-201ENST00000372276 GPR75-ASB3A0A0A6YYF3 556 aa20.5■□□□□ 0.87
CD40-201ENST00000372276 A0A1B0GTH6 734 aa20.5■□□□□ 0.87
CD40-201ENST00000372276 VWA3AA6NCI4 1184 aa20.5■□□□□ 0.87
CD40-201ENST00000372276 NR1I3Q14994 352 aa20.5■□□□□ 0.87
CD40-201ENST00000372276 EARS2Q5JPH6 523 aaKnown RBP20.5■□□□□ 0.87
CD40-201ENST00000372276 ANKRD20A12PQ8NF67 263 aa20.5■□□□□ 0.87
CD40-201ENST00000372276 SH3RF3Q8TEJ3 882 aaPredicted RBP20.5■□□□□ 0.87
CD40-201ENST00000372276 L2HGDHQ9H9P8 463 aa20.5■□□□□ 0.87
CD40-201ENST00000372276 GGA1Q9UJY5 639 aa20.5■□□□□ 0.87
CD40-201ENST00000372276 SBF2Q86WG5 1849 aa20.5■□□□□ 0.87
CD40-201ENST00000372276 CCDC194A0A1B0GVG4 234 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 NMT2O60551 498 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 PRPHP41219 470 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 ETF1P62495 437 aaKnown RBP20.49■□□□□ 0.87
CD40-201ENST00000372276 FMR1Q06787 632 aaKnown RBP eCLIP20.49■□□□□ 0.87
CD40-201ENST00000372276 SLC27A3Q5K4L6 730 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 USP49Q70CQ1 688 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 BAG1Q99933 345 aaPredicted RBP20.49■□□□□ 0.87
CD40-201ENST00000372276 MAGEF1Q9HAY2 307 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 IL17RBQ9NRM6 502 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 SUGT1Q9Y2Z0 365 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 SYNRGQ9UMZ2 1314 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 hCG_1642624A0A1W2PR95 340 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 FAM205CA6NFA0 338 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 hCG_1984214I3L0E3 225 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 NCBP1Q09161 790 aaKnown RBP20.49■□□□□ 0.87
CD40-201ENST00000372276 CUL4BQ13620 913 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 E2F4Q16254 413 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 PTF1AQ7RTS3 328 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 HOMER1Q86YM7 354 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 ZNF713Q8N859 430 aaPredicted RBP20.49■□□□□ 0.87
CD40-201ENST00000372276 CCDC51Q96ER9 411 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 PANX2Q96RD6 677 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 SPZ1Q9BXG8 430 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 CD209Q9NNX6 404 aa20.49■□□□□ 0.87
CD40-201ENST00000372276 PALM3A6NDB9 673 aaPredicted RBP20.48■□□□□ 0.87
CD40-201ENST00000372276 HOXA10P31260 410 aaPredicted RBP20.48■□□□□ 0.87
CD40-201ENST00000372276 PRR5LQ6MZQ0 368 aa20.48■□□□□ 0.87
CD40-201ENST00000372276 C16orf86Q6ZW13 317 aa20.48■□□□□ 0.87
CD40-201ENST00000372276 NEDD1Q8NHV4 660 aa20.48■□□□□ 0.87
CD40-201ENST00000372276 CRAMP1Q96RY5 1269 aa20.48■□□□□ 0.87
CD40-201ENST00000372276 CUEDC2Q9H467 287 aa20.48■□□□□ 0.87
CD40-201ENST00000372276 BARHL2Q9NY43 387 aa20.48■□□□□ 0.87
CD40-201ENST00000372276 MAD2L2Q9UI95 211 aa20.48■□□□□ 0.87
CD40-201ENST00000372276 TPM1P09493 284 aa20.47■□□□□ 0.87
CD40-201ENST00000372276 AFMP43652 599 aa20.47■□□□□ 0.87
CD40-201ENST00000372276 CDKAL1Q5VV42 579 aa20.47■□□□□ 0.87
CD40-201ENST00000372276 DTHD1Q6ZMT9 781 aa20.47■□□□□ 0.87
CD40-201ENST00000372276 TGFBRAP1Q8WUH2 860 aa20.47■□□□□ 0.87
CD40-201ENST00000372276 RTFDC1Q9BY42 306 aaPredicted RBP20.47■□□□□ 0.87
CD40-201ENST00000372276 RWDD2AQ9UIY3 292 aa20.47■□□□□ 0.87
CD40-201ENST00000372276 A0A087X0B3 334 aa20.46■□□□□ 0.87
CD40-201ENST00000372276 TRIM37O94972 964 aa20.46■□□□□ 0.87
CD40-201ENST00000372276 GNA11P29992 359 aa20.46■□□□□ 0.87
CD40-201ENST00000372276 MCM7P33993 719 aa20.46■□□□□ 0.87
CD40-201ENST00000372276 KRT25Q7Z3Z0 450 aa20.46■□□□□ 0.87
CD40-201ENST00000372276 PPFIBP1Q86W92 1011 aa20.46■□□□□ 0.87
CD40-201ENST00000372276 GRAMD1CQ8IYS0 662 aa20.46■□□□□ 0.87
CD40-201ENST00000372276 AK8Q96MA6 479 aa20.46■□□□□ 0.87
CD40-201ENST00000372276 INTS13Q9NVM9 706 aa20.46■□□□□ 0.87
CD40-201ENST00000372276 ITIH6Q6UXX5 1313 aa20.46■□□□□ 0.87
CD40-201ENST00000372276 PPP1R3GB7ZBB8 358 aa20.45■□□□□ 0.87
CD40-201ENST00000372276 AKR1B15C9JRZ8 316 aaPredicted RBP20.45■□□□□ 0.87
CD40-201ENST00000372276 M0R2N6 131 aa20.45■□□□□ 0.87
CD40-201ENST00000372276 UFL1O94874 794 aa20.45■□□□□ 0.87
CD40-201ENST00000372276 HOXA7P31268 230 aaPredicted RBP20.45■□□□□ 0.87
CD40-201ENST00000372276 PPP1R2P41236 205 aa20.45■□□□□ 0.87
CD40-201ENST00000372276 GPSM2P81274 684 aa20.45■□□□□ 0.87
CD40-201ENST00000372276 TRIM14Q14142 442 aa20.45■□□□□ 0.87
CD40-201ENST00000372276 ZNF658Q5TYW1 1059 aaPredicted RBP20.45■□□□□ 0.87
CD40-201ENST00000372276 PDXDC2PQ6P474 469 aa20.45■□□□□ 0.87
CD40-201ENST00000372276 C4orf32Q8N8J7 132 aa20.45■□□□□ 0.87
CD40-201ENST00000372276 TSC1Q92574 1164 aa20.45■□□□□ 0.87
CD40-201ENST00000372276 CCSER1Q9C0I3 900 aa20.45■□□□□ 0.87
CD40-201ENST00000372276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.45■□□□□ 0.87
CD40-201ENST00000372276 LRRC10BA6NIK2 292 aa20.45■□□□□ 0.86
CD40-201ENST00000372276 RASA1P20936 1047 aa20.45■□□□□ 0.86
CD40-201ENST00000372276 BTDP43251 543 aa20.45■□□□□ 0.86
CD40-201ENST00000372276 SF3B2Q13435 895 aaKnown RBP20.45■□□□□ 0.86
CD40-201ENST00000372276 SMIM5Q71RC9 77 aa20.45■□□□□ 0.86
CD40-201ENST00000372276 TEX11Q8IYF3 940 aa20.45■□□□□ 0.86
CD40-201ENST00000372276 CCDC24Q8N4L8 307 aa20.45■□□□□ 0.86
CD40-201ENST00000372276 TMEM47Q9BQJ4 181 aa20.45■□□□□ 0.86
CD40-201ENST00000372276 FAM205AQ6ZU69 1335 aa20.45■□□□□ 0.86
CD40-201ENST00000372276 TMEM232C9JQI7 657 aa20.44■□□□□ 0.86
CD40-201ENST00000372276 SERPINB2P05120 415 aa20.44■□□□□ 0.86
CD40-201ENST00000372276 KCNB1Q14721 858 aa20.44■□□□□ 0.86
CD40-201ENST00000372276 ZNF827Q17R98 1081 aa20.44■□□□□ 0.86
CD40-201ENST00000372276 PPP4R3BQ5MIZ7 849 aa20.44■□□□□ 0.86
CD40-201ENST00000372276 TC2NQ8N9U0 490 aa20.44■□□□□ 0.86
CD40-201ENST00000372276 CCDC47Q96A33 483 aaKnown RBP20.44■□□□□ 0.86
CD40-201ENST00000372276 C6orf50Q9HD87 102 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms