RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 SPAG7O75391 227 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 ARHGDIAP52565 204 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 RRAGAQ7L523 313 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 SERPINI1Q99574 410 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 ABCC11Q96J66 1382 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 ATF2P15336 505 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 GNA11P29992 359 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 UHMK1Q8TAS1 419 aaKnown RBP16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 G3BP2Q9UN86 482 aaKnown RBP16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 SYNJ2O15056 1496 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 SBNO2Q9Y2G9 1366 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 NVLO15381 856 aaKnown RBP16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 NMIQ13287 307 aaPredicted RBP16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 POSTNQ15063 836 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 RAPGEF5Q92565 580 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 TAB2Q9NYJ8 693 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 C9orf84Q5VXU9 1444 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 PTCD1O75127 700 aaKnown RBP16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 PDXDC1Q6P996 788 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 EIF4E1BA6NMX2 242 aaKnown RBP16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 WAPLQ7Z5K2 1190 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 LRRC8AQ8IWT6 810 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 POLE3Q9NRF9 147 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 PLCD1P51178 756 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 IRX1P78414 480 aaPredicted RBP16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 GSTO1P78417 241 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 ZCRB1Q8TBF4 217 aaKnown RBP16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 TRIM15Q9C019 465 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 ANKRD36BQ8N2N9 1353 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 ZNF500O60304 480 aaPredicted RBP16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 DAB1O75553 588 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 LMNB1P20700 586 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 MAGEA1P43355 309 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 DTNBP1Q96EV8 351 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 CHGBP05060 677 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 ADCY1Q08828 1119 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 TADA2BQ86TJ2 420 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 TBC1D7Q9P0N9 293 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 INHBAP08476 426 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 ABCB4P21439 1286 aa16.74■□□□□ 0.27
GTF3C4-201ENST00000372146 FOXD4Q12950 439 aaPredicted RBP16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 H0Y3Z8 333 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 CFAP70Q5T0N1 1121 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 RNF169Q8NCN4 708 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 FAM207AQ9NSI2 230 aaPredicted RBP16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 HIBCHQ6NVY1 386 aaPredicted RBP16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 SUPT3HO75486 399 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 HDAC1Q13547 482 aaPredicted RBP16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 FBXL13Q8NEE6 735 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 KRT8P05787 483 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 NCF2P19878 526 aaPredicted RBP16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 RNF207Q6ZRF8 634 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 NACA2Q9H009 215 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 HYOU1Q9Y4L1 999 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 GARSP41250 739 aaKnown RBP16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 XPO4Q9C0E2 1151 aaKnown RBP16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 SESTD1Q86VW0 696 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 PPP2R2CQ9Y2T4 447 aa16.73■□□□□ 0.27
GTF3C4-201ENST00000372146 KAT6AQ92794 2004 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 CREB3L3Q68CJ9 461 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 CCHCR1Q8TD31 782 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 OLFM3Q96PB7 478 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 COQ7Q99807 217 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 STX1BP61266 288 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 ATG16L1Q676U5 607 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 CNOT10Q9H9A5 744 aaKnown RBP16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 APBA1Q02410 837 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 FCHSD1Q86WN1 690 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 OSBPL1AQ9BXW6 950 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 KIAA1107Q9UPP5 1409 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 SP4Q02446 784 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 OLFML2BQ68BL8 750 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 OLA1Q9NTK5 396 aaKnown RBP16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 SLFN14P0C7P3 912 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 HDAC4P56524 1084 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 BASP1P80723 227 aaKnown RBP16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 TUBB6Q9BUF5 446 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 SUCLA2Q9P2R7 463 aaPredicted RBP16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 SBNO1A3KN83 1393 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 FAM135AQ9P2D6 1515 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 A0A1B0GW55 424 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 APOA1P02647 267 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 DUX4L2P0CJ85 424 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 DUX4L3P0CJ86 424 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 DUX4L4P0CJ87 422 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 DUX4L5P0CJ88 424 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 DUX4L6P0CJ89 424 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 DUX4L7P0CJ90 424 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 DUX4Q9UBX2 424 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 KAZNQ674X7 775 aa16.72■□□□□ 0.27
GTF3C4-201ENST00000372146 KIF17Q9P2E2 1029 aa16.71■□□□□ 0.27
GTF3C4-201ENST00000372146 SPDYE16A6NNV3 312 aaPredicted RBP16.71■□□□□ 0.27
GTF3C4-201ENST00000372146 GCNT3O95395 438 aa16.71■□□□□ 0.27
GTF3C4-201ENST00000372146 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
GTF3C4-201ENST00000372146 AFAP1Q8N556 730 aa16.71■□□□□ 0.27
GTF3C4-201ENST00000372146 NFE2L3Q9Y4A8 694 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms