RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 WDR59Q6PJI9 974 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 SH2D3CQ8N5H7 860 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 OR8K1Q8NGG5 319 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 SMCR8Q8TEV9 937 aaPredicted RBP10.85□□□□□ -0.67
LRRC40-201ENST00000370952 AENQ8WTP8 325 aaKnown RBP10.85□□□□□ -0.67
LRRC40-201ENST00000370952 NELFBQ8WX92 580 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 SHISA4Q96DD7 197 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 EEF2KMTQ96G04 330 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 PSMB7Q99436 277 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 JPH2Q9BR39 696 aaPredicted RBP10.85□□□□□ -0.67
LRRC40-201ENST00000370952 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.85□□□□□ -0.676e-8■■■■■ 46.2
LRRC40-201ENST00000370952 SMARCAL1Q9NZC9 954 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 GDAQ9Y2T3 454 aa10.85□□□□□ -0.67
LRRC40-201ENST00000370952 NDUFAB1O14561 156 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 PPARDQ03181 441 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 TSEN2Q8NCE0 465 aaKnown RBP10.84□□□□□ -0.67
LRRC40-201ENST00000370952 LRRC1Q9BTT6 524 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 EHD2Q9NZN4 543 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 FAM184BQ9ULE4 1060 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 LUC7L2Q9Y383 392 aaKnown RBP10.84□□□□□ -0.67
LRRC40-201ENST00000370952 CHD4Q14839 1912 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 AKAP11Q9UKA4 1901 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 WDR17Q8IZU2 1322 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 ZEB2O60315 1214 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 PAK1Q13153 545 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 TTMPQ5BVD1 217 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 GPIHBP1Q8IV16 184 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 ZNF330Q9Y3S2 320 aaPredicted RBP10.84□□□□□ -0.67
LRRC40-201ENST00000370952 TJP1Q07157 1748 aa10.84□□□□□ -0.67
LRRC40-201ENST00000370952 LRRC10BA6NIK2 292 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 DEXIO95424 95 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 ATP6V1AP38606 617 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 LIFRP42702 1097 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 MMP14P50281 582 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 TRIM14Q14142 442 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 POTEDQ86YR6 584 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 CNPY4Q8N129 248 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 CRACR2BQ8N4Y2 399 aaPredicted RBP10.83□□□□□ -0.68
LRRC40-201ENST00000370952 EPB41L4AQ9HCS5 686 aaPredicted RBP10.83□□□□□ -0.68
LRRC40-201ENST00000370952 ADAMTS7Q9UKP4 1686 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 SLIT3O75094 1523 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 USP8P40818 1118 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 SH3GL2Q99962 352 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 CD248Q9HCU0 757 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 KRT86O43790 486 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 PARP1P09874 1014 aaKnown RBP10.83□□□□□ -0.68
LRRC40-201ENST00000370952 CCDC172P0C7W6 258 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 KLK7P49862 253 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 SPAG1Q07617 926 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 TCIRG1Q13488 830 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 WTAPQ15007 396 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 TSR1Q2NL82 804 aaKnown RBP10.83□□□□□ -0.68
LRRC40-201ENST00000370952 OTUD6BQ8N6M0 293 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 RPGRIP1Q96KN7 1286 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 MTRQ99707 1265 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 NAPBQ9H115 298 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 AGPAT5Q9NUQ2 364 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 RWDD2AQ9UIY3 292 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 TBC1D2BQ9UPU7 963 aa10.83□□□□□ -0.68
LRRC40-201ENST00000370952 PDE6AP16499 860 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 TATP17735 454 aaPredicted RBP10.82□□□□□ -0.68
LRRC40-201ENST00000370952 CXCR5P32302 372 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 FNTAP49354 379 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 METTL24Q5JXM2 366 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 IRF2BP1Q8IU81 584 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 IFNL3Q8IZI9 196 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 MB21D1Q8N884 522 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 PRPF38AQ8NAV1 312 aaKnown RBP10.82□□□□□ -0.68
LRRC40-201ENST00000370952 RUFY1Q96T51 708 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 PKD1L3Q7Z443 1732 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 GOLGA8KD6RF30 607 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 KIAA0754O94854 1291 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 MYCNP04198 464 aaPredicted RBP10.82□□□□□ -0.68
LRRC40-201ENST00000370952 PRCPP42785 496 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 TDO2P48775 406 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 KRT26Q7Z3Y9 468 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 IFNL2Q8IZJ0 200 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 FAM212AQ96EL1 285 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 FAM89AQ96GI7 184 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 CABS1Q96KC9 395 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 STRBPQ96SI9 672 aaKnown RBP10.82□□□□□ -0.68
LRRC40-201ENST00000370952 ORAI2Q96SN7 254 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 ARMT1Q9H993 441 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 SUFUQ9UMX1 484 aa10.82□□□□□ -0.68
LRRC40-201ENST00000370952 CYP27B1O15528 508 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 PRKAB2O43741 272 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 KRT14P02533 472 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 PMS1P54277 932 aaKnown RBP10.81□□□□□ -0.68
LRRC40-201ENST00000370952 CABP4P57796 275 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 APBA1Q02410 837 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 CCDC70Q6NSX1 233 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 GBP6Q6ZN66 633 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 SYNE4Q8N205 404 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 DNAJC7Q99615 494 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 CEP83Q9Y592 693 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 FER1L4A9Z1Z3 1794 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 PHRF1Q9P1Y6 1649 aaKnown RBP10.81□□□□□ -0.68
LRRC40-201ENST00000370952 MBD4O95243 580 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 KRT83P78385 493 aa10.81□□□□□ -0.68
LRRC40-201ENST00000370952 SETQ01105 290 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms