RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 DIAPH3Q9NSV4 1193 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 COL4A3BPQ9Y5P4 624 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 MED23Q9ULK4 1368 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 XDHP47989 1333 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 PDE4DQ08499 809 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 FILIP1LQ4L180 1135 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 SP8Q8IXZ3 490 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 RAVER1Q8IY67 606 aaKnown RBP8.53□□□□□ -1.04
BRCC3-203ENST00000369459 EFCAB13Q8IY85 973 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 ANKRD20A12PQ8NF67 263 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 USP33Q8TEY7 942 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 GIPC2Q8TF65 315 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 JDP2Q8WYK2 163 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 CELF1Q92879 486 aaKnown RBP8.53□□□□□ -1.04
BRCC3-203ENST00000369459 SYAP1Q96A49 352 aaPredicted RBP8.53□□□□□ -1.04
BRCC3-203ENST00000369459 RMDN2Q96LZ7 410 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 TRIM7Q9C029 511 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 RBSNQ9H1K0 784 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 TRPV5Q9NQA5 729 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 DCAF16Q9NXF7 216 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 LMCD1Q9NZU5 365 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.53□□□□□ -1.04
BRCC3-203ENST00000369459 IRS2Q9Y4H2 1338 aa8.53□□□□□ -1.04
BRCC3-203ENST00000369459 MMP10P09238 476 aa8.52□□□□□ -1.04
BRCC3-203ENST00000369459 ATP2B4P23634 1241 aa8.52□□□□□ -1.04
BRCC3-203ENST00000369459 KIF4BQ2VIQ3 1234 aa8.52□□□□□ -1.04
BRCC3-203ENST00000369459 ACBD5Q5T8D3 534 aaPredicted RBP8.52□□□□□ -1.04
BRCC3-203ENST00000369459 CCDC102BQ68D86 513 aa8.52□□□□□ -1.04
BRCC3-203ENST00000369459 MASTLQ96GX5 879 aa8.52□□□□□ -1.04
BRCC3-203ENST00000369459 TMEM87BQ96K49 555 aa8.52□□□□□ -1.04
BRCC3-203ENST00000369459 IWS1Q96ST2 819 aa8.52□□□□□ -1.04
BRCC3-203ENST00000369459 BAG1Q99933 345 aaPredicted RBP8.52□□□□□ -1.04
BRCC3-203ENST00000369459 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.52□□□□□ -1.04
BRCC3-203ENST00000369459 BOLA2Q9H3K6 86 aa8.52□□□□□ -1.04
BRCC3-203ENST00000369459 UBAP1Q9NZ09 502 aa8.52□□□□□ -1.04
BRCC3-203ENST00000369459 ZMAT5Q9UDW3 170 aaKnown RBP8.52□□□□□ -1.04
BRCC3-203ENST00000369459 CHD4Q14839 1912 aa8.52□□□□□ -1.05
BRCC3-203ENST00000369459 PRC1O43663 620 aa8.52□□□□□ -1.05
BRCC3-203ENST00000369459 SRGNP10124 158 aa8.52□□□□□ -1.05
BRCC3-203ENST00000369459 TMED1Q13445 227 aa8.52□□□□□ -1.05
BRCC3-203ENST00000369459 MAPRE1Q15691 268 aaKnown RBP8.52□□□□□ -1.05
BRCC3-203ENST00000369459 CAVIN4Q5BKX8 364 aa8.52□□□□□ -1.05
BRCC3-203ENST00000369459 TSHZ3Q63HK5 1081 aa8.52□□□□□ -1.05
BRCC3-203ENST00000369459 MTHFD1LQ6UB35 978 aa8.52□□□□□ -1.05
BRCC3-203ENST00000369459 FBXO33Q7Z6M2 555 aa8.52□□□□□ -1.05
BRCC3-203ENST00000369459 TBC1D20Q96BZ9 403 aa8.52□□□□□ -1.05
BRCC3-203ENST00000369459 FSD1Q9BTV5 496 aa8.52□□□□□ -1.05
BRCC3-203ENST00000369459 SEL1LQ9UBV2 794 aa8.52□□□□□ -1.05
BRCC3-203ENST00000369459 ZNF646O15015 1829 aaPredicted RBP8.52□□□□□ -1.05
BRCC3-203ENST00000369459 SPTLC2O15270 562 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 CCDC159P0C7I6 412 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 ADORA1P30542 326 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 HOXC13P31276 330 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 SYCP2LQ5T4T6 812 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 ZNF710Q8N1W2 664 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 SH3GL3Q99963 347 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 GPCPD1Q9NPB8 672 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 INCENPQ9NQS7 918 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 DMGDHQ9UI17 866 aaKnown RBP8.51□□□□□ -1.05
BRCC3-203ENST00000369459 DENND2AQ9ULE3 1009 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 BARX2Q9UMQ3 279 aaPredicted RBP8.51□□□□□ -1.05
BRCC3-203ENST00000369459 SALL1Q9NSC2 1324 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 ARFGEF1Q9Y6D6 1849 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.51□□□□□ -1.05
BRCC3-203ENST00000369459 EIF2B5Q13144 721 aaKnown RBP8.51□□□□□ -1.05
BRCC3-203ENST00000369459 PDIA5Q14554 519 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 LLGL2Q6P1M3 1020 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 SNX21Q969T3 373 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 CLIP2Q9UDT6 1046 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 ATP6V0A2Q9Y487 856 aa8.51□□□□□ -1.05
BRCC3-203ENST00000369459 RPAP1Q9BWH6 1393 aaPredicted RBP8.51□□□□□ -1.05
BRCC3-203ENST00000369459 RNF113AO15541 343 aaKnown RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 MSL3P1P0C860 447 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 TPP2P29144 1249 aaPredicted RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 TAGLNQ01995 201 aaKnown RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 RABEP1Q15276 862 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 UBE3CQ15386 1083 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 ZMYM1Q5SVZ6 1142 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 TBC1D31Q96DN5 1066 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 PCDH12Q9NPG4 1184 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 SLX4Q8IY92 1834 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 FOCADQ5VW36 1801 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 LINC00854A0A1B0GVQ3 168 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 C19orf81C9J6K1 198 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 EIF3FO00303 357 aaPredicted RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 S100BP04271 92 aaPredicted RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 IBSPP21815 317 aaPredicted RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 MCAMP43121 646 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 BECN1Q14457 450 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 MCMDC2Q4G0Z9 681 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 C9orf131Q5VYM1 1079 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 SASS6Q6UVJ0 657 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 MIGA1Q8NAN2 632 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 SPATA5Q8NB90 893 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 APPL2Q8NEU8 664 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 SH3TC2Q8TF17 1288 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 HPS3Q969F9 1004 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 CNKSR1Q969H4 720 aa8.5□□□□□ -1.05
BRCC3-203ENST00000369459 LSG1Q9H089 658 aaKnown RBP8.5□□□□□ -1.05
BRCC3-203ENST00000369459 CLIC5Q9NZA1 410 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms