RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CNTNAP5Q8WYK1 1306 aa13.95□□□□□ -0.18
USF1-203ENST00000368021 PALM3A6NDB9 673 aaPredicted RBP13.94□□□□□ -0.18
USF1-203ENST00000368021 UBE2Q2LH0YL09 131 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 MAP3K10Q02779 954 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 DNM1Q05193 864 aaKnown RBP13.94□□□□□ -0.18
USF1-203ENST00000368021 TRIM29Q14134 588 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 CSPP1Q1MSJ5 1256 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 ATL3Q6DD88 541 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 CYP4F22Q6NT55 531 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 CMTR1Q8N1G2 835 aaKnown RBP13.94□□□□□ -0.18
USF1-203ENST00000368021 SRBD1Q8N5C6 995 aaKnown RBP13.94□□□□□ -0.18
USF1-203ENST00000368021 CHAMP1Q96JM3 812 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 KANSL2Q9H9L4 492 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 TRPM7Q96QT4 1865 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 MPHOSPH10O00566 681 aaKnown RBP13.94□□□□□ -0.18
USF1-203ENST00000368021 TRAK2O60296 914 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 SMARCA1P28370 1054 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 GUCY1A2P33402 732 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 FOXD4L6Q3SYB3 417 aaPredicted RBP13.94□□□□□ -0.18
USF1-203ENST00000368021 SUPT20HL1Q3ZLR7 823 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 KRT40Q6A162 431 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 FOXD4L3Q6VB84 417 aaPredicted RBP13.94□□□□□ -0.18
USF1-203ENST00000368021 BRAPQ7Z569 592 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 CCDC82Q8N4S0 544 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 MKL1Q969V6 931 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 KLRG1Q96E93 195 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 TEPSINQ96N21 525 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 AIFM3Q96NN9 605 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.94□□□□□ -0.18
USF1-203ENST00000368021 NYAP2Q9P242 653 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 PPP2R3BQ9Y5P8 575 aa13.94□□□□□ -0.18
USF1-203ENST00000368021 MYH4Q9Y623 1939 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 FAM196BA6NMK8 535 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 PARP1P09874 1014 aaKnown RBP13.93□□□□□ -0.18
USF1-203ENST00000368021 SLURP2P0DP57 97 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 XBP1P17861 261 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 VEGFBP49765 207 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 FOSBP53539 338 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 GUCY1B3Q02153 619 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 PKN1Q16512 942 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 ABCB5Q2M3G0 1257 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 MIGA2Q7L4E1 593 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 SCAND2PQ9GZW5 306 aaPredicted RBP13.93□□□□□ -0.18
USF1-203ENST00000368021 CLIP2Q9UDT6 1046 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 SYNPO2Q9UMS6 1093 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 CNPY2Q9Y2B0 182 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 BAZ2BQ9UIF8 2168 aaKnown RBP13.93□□□□□ -0.18
USF1-203ENST00000368021 MYH15Q9Y2K3 1946 aa13.93□□□□□ -0.18
USF1-203ENST00000368021 RASSF10A6NK89 507 aa13.92□□□□□ -0.18
USF1-203ENST00000368021 PPP1R12BO60237 982 aaPredicted RBP13.92□□□□□ -0.18
USF1-203ENST00000368021 PRPF40AO75400 957 aaKnown RBP13.92□□□□□ -0.18
USF1-203ENST00000368021 PDHBP11177 359 aa13.92□□□□□ -0.18
USF1-203ENST00000368021 KIF23Q02241 960 aaPredicted RBP13.92□□□□□ -0.18
USF1-203ENST00000368021 OTUD7BQ6GQQ9 843 aa13.92□□□□□ -0.18
USF1-203ENST00000368021 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
USF1-203ENST00000368021 SPZ1Q9BXG8 430 aa13.92□□□□□ -0.18
USF1-203ENST00000368021 CABP5Q9NP86 173 aa13.92□□□□□ -0.18
USF1-203ENST00000368021 V9GY48 417 aaPredicted RBP13.92□□□□□ -0.18
USF1-203ENST00000368021 U2AF2P26368 475 aaKnown RBP eCLIP13.92□□□□□ -0.18
USF1-203ENST00000368021 ZNF157P51786 506 aaPredicted RBP13.92□□□□□ -0.18
USF1-203ENST00000368021 KLHL40Q2TBA0 621 aa13.92□□□□□ -0.18
USF1-203ENST00000368021 ASPRV1Q53RT3 343 aa13.92□□□□□ -0.18
USF1-203ENST00000368021 RRAGDQ9NQL2 400 aaPredicted RBP13.92□□□□□ -0.18
USF1-203ENST00000368021 GJB4Q9NTQ9 266 aa13.92□□□□□ -0.18
USF1-203ENST00000368021 CFAP45Q9UL16 551 aa13.92□□□□□ -0.18
USF1-203ENST00000368021 ELP1O95163 1332 aa13.92□□□□□ -0.18
USF1-203ENST00000368021 KLRF2D3W0D1 207 aa13.91□□□□□ -0.18
USF1-203ENST00000368021 MMP1P03956 469 aa13.91□□□□□ -0.18
USF1-203ENST00000368021 ICA1Q05084 483 aa13.91□□□□□ -0.18
USF1-203ENST00000368021 PFKFB3Q16875 520 aaPredicted RBP13.91□□□□□ -0.18
USF1-203ENST00000368021 UTP14CQ5TAP6 766 aaKnown RBP13.91□□□□□ -0.18
USF1-203ENST00000368021 FAM173BQ6P4H8 233 aa13.91□□□□□ -0.18
USF1-203ENST00000368021 ARMC9Q7Z3E5 817 aa13.91□□□□□ -0.18
USF1-203ENST00000368021 FAM177A1Q8N128 213 aaPredicted RBP13.91□□□□□ -0.18
USF1-203ENST00000368021 LRRC47Q8N1G4 583 aaKnown RBP13.91□□□□□ -0.18
USF1-203ENST00000368021 CAPNS2Q96L46 248 aa13.91□□□□□ -0.18
USF1-203ENST00000368021 SSC5DA1L4H1 1573 aa13.91□□□□□ -0.18
USF1-203ENST00000368021 FIBPO43427 364 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 USP2O75604 605 aaPredicted RBP13.9□□□□□ -0.18
USF1-203ENST00000368021 MBD3O95983 291 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 SCG2P13521 617 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 MKRN3Q13064 507 aaKnown RBP13.9□□□□□ -0.18
USF1-203ENST00000368021 SEPT2Q15019 361 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 SAFBQ15424 915 aaKnown RBP eCLIP13.9□□□□□ -0.18
USF1-203ENST00000368021 GPATCH4Q5T3I0 446 aaKnown RBP13.9□□□□□ -0.18
USF1-203ENST00000368021 RGMBQ6NW40 437 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 CLEC10AQ8IUN9 316 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 ZNF396Q96N95 335 aaPredicted RBP13.9□□□□□ -0.18
USF1-203ENST00000368021 GDPD2Q9HCC8 539 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 PRDM4Q9UKN5 801 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 DDX49Q9Y6V7 483 aaKnown RBP13.9□□□□□ -0.18
USF1-203ENST00000368021 USP17L5A8MUK1 530 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 CYTH3O43739 400 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 AOC2O75106 756 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 GDF11O95390 407 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 GH2P01242 217 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 EEF2P13639 858 aaKnown RBP13.9□□□□□ -0.18
USF1-203ENST00000368021 FKBP1BP68106 108 aa13.9□□□□□ -0.18
USF1-203ENST00000368021 RRP1BQ14684 758 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms